LLPS-Gas-1369
Gasu_56650
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Transcription initiation factor IIF beta subunit (TFIIF-beta) family protein |
| Gene Name: | Gasu_56650 |
| Ensembl Gene: | Gasu_56650 |
| Ensembl Protein: | EME26769 |
| Organism: | Galdieria sulphuraria |
| Taxa ID: | 130081 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | EME26769 | EME26769 |
| UniProt | M2XTN1, M2XTN1_GALSU | |
| GeneBank | KB454543 | EME26769.1 |
| RefSeq | XM_005703232.1 | XP_005703289.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MTGVLTGGGS INSNSFLDSY CSNMASALAG QVDNSGLSKR VLVLKIPRNT LQQLEDSCSK 60 61 NNISKSYLLL SKHGNKEGEK LVVAVEAGRM EEKQLKFIPE RPSMIVFSQL RDDETGQVKL 120 121 EGTVERQGFV QTSLSGDYKL KQRKLQEQLK PNRVTNFLDE ESLLYAHEDG LKPGQHWKAT 180 181 QAFEERKRKN VDDRRVVEAG NSEWKENCLL KLFQLFERKP RWSIRELNNE IQIPTSRLKT 240 241 VVNEVCQIHR SGPLRGQYEL KDEYKTKQQR DETAADAAAL MEEIRASSTP GSIEDLMPVG 300 301 KSRRYQ 306 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGACCGGCG TACTAACAGG CGGAGGTTCC ATCAACTCCA ATTCTTTTTT GGATTCTTAT 60 61 TGTTCAAACA TGGCGTCAGC CTTAGCAGGT CAAGTGGATA ACTCTGGCCT ATCAAAAAGA 120 121 GTACTTGTTT TAAAAATACC GCGTAATACA CTTCAACAAT TAGAAGATAG TTGTTCAAAG 180 181 AACAACATTT CCAAGTCTTA TTTGTTGCTT TCTAAGCATG GAAATAAGGA AGGTGAGAAA 240 241 CTGGTTGTCG CAGTTGAAGC TGGCAGAATG GAGGAAAAAC AACTCAAATT CATTCCCGAA 300 301 AGGCCTTCTA TGATAGTATT TAGTCAGTTA AGAGATGACG AGACAGGTCA AGTGAAACTG 360 361 GAAGGAACTG TGGAGCGACA AGGTTTTGTT CAAACTTCCT TAAGTGGTGA CTACAAGTTG 420 421 AAACAACGTA AACTTCAAGA ACAGCTCAAA CCAAATAGAG TAACAAACTT TCTTGACGAG 480 481 GAAAGTTTGC TTTATGCACA CGAAGACGGT TTGAAGCCAG GTCAGCATTG GAAAGCAACT 540 541 CAAGCATTTG AAGAGAGAAA GAGAAAGAAC GTGGATGATC GTAGAGTCGT GGAAGCAGGA 600 601 AATAGTGAGT GGAAGGAAAA CTGTCTGCTC AAGCTGTTTC AATTATTTGA ACGAAAGCCT 660 661 AGATGGAGTA TTCGAGAATT AAACAACGAA ATACAGATAC CCACAAGTCG TCTAAAGACT 720 721 GTTGTCAACG AAGTATGTCA AATTCATAGA AGTGGGCCTT TGAGAGGGCA ATATGAGTTG 780 781 AAAGATGAAT ACAAAACCAA GCAGCAACGA GATGAAACTG CGGCAGATGC AGCAGCACTT 840 841 ATGGAGGAAA TTCGAGCCTC CTCAACACCC GGGTCGATCG AAGACTTGAT GCCTGTTGGA 900 901 AAATCTCGTC GATATCAATA A 921 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Tru-0382 | Triticum urartu | 48.15 | 5e-09 | 59.7 |
| LLPS-Amt-0406 | Amborella trichopoda | 46.3 | 2e-09 | 61.2 |
| LLPS-Phv-1138 | Phaseolus vulgaris | 44.44 | 4e-08 | 57.4 |
| LLPS-Nia-1308 | Nicotiana attenuata | 44.44 | 2e-08 | 58.2 |
| LLPS-Pot-2605 | Populus trichocarpa | 44.44 | 3e-08 | 57.8 |
| LLPS-Viv-1700 | Vitis vinifera | 44.44 | 4e-07 | 54.3 |
| LLPS-Coc-0722 | Corchorus capsularis | 44.44 | 3e-08 | 57.8 |
| LLPS-Thc-1029 | Theobroma cacao | 44.44 | 4e-08 | 57.4 |
| LLPS-Glm-0373 | Glycine max | 44.44 | 3e-08 | 57.8 |
| LLPS-Vir-0955 | Vigna radiata | 44.44 | 7e-08 | 57.0 |
| LLPS-Met-0630 | Medicago truncatula | 44.44 | 4e-08 | 57.4 |
| LLPS-Cus-0822 | Cucumis sativus | 44.44 | 2e-08 | 58.2 |
| LLPS-Sei-1437 | Setaria italica | 44.44 | 7e-09 | 60.1 |
| LLPS-Sot-2163 | Solanum tuberosum | 44.44 | 2e-08 | 57.4 |
| LLPS-Via-1658 | Vigna angularis | 44.44 | 4e-08 | 57.4 |
| LLPS-Gor-2084 | Gossypium raimondii | 43.08 | 4e-09 | 60.1 |
| LLPS-Dac-0471 | Daucus carota | 43.08 | 5e-09 | 60.1 |
| LLPS-Orp-1485 | Oryza punctata | 42.65 | 9e-09 | 59.3 |
| LLPS-Ors-1841 | Oryza sativa | 42.65 | 1e-08 | 59.3 |
| LLPS-Orr-0124 | Oryza rufipogon | 42.65 | 1e-08 | 59.3 |
| LLPS-Orni-2265 | Oryza nivara | 42.65 | 1e-08 | 59.3 |
| LLPS-Orb-2202 | Oryza barthii | 42.65 | 1e-08 | 59.3 |
| LLPS-Ori-0176 | Oryza indica | 42.65 | 1e-08 | 59.3 |
| LLPS-Orgl-0980 | Oryza glumaepatula | 42.65 | 1e-08 | 59.3 |
| LLPS-Orbr-1602 | Oryza brachyantha | 42.59 | 1e-07 | 55.8 |
| LLPS-Org-0597 | Oryza glaberrima | 42.59 | 1e-07 | 55.8 |
| LLPS-Prp-1581 | Prunus persica | 42.59 | 1e-07 | 55.8 |
| LLPS-Orm-0501 | Oryza meridionalis | 42.59 | 9e-08 | 56.2 |
| LLPS-Mua-2247 | Musa acuminata | 42.59 | 6e-08 | 56.6 |
| LLPS-Zem-2046 | Zea mays | 42.19 | 1e-07 | 56.6 |
| LLPS-Usm-0415 | Ustilago maydis | 41.67 | 9e-06 | 50.8 |
| LLPS-Mae-0645 | Manihot esculenta | 41.54 | 9e-09 | 59.3 |
| LLPS-Hea-0985 | Helianthus annuus | 41.54 | 1e-07 | 56.2 |
| LLPS-Sol-1110 | Solanum lycopersicum | 41.54 | 3e-08 | 58.2 |
| LLPS-Hov-1088 | Hordeum vulgare | 40.74 | 1e-07 | 56.2 |
| LLPS-Sob-0784 | Sorghum bicolor | 40.3 | 8e-08 | 56.6 |
| LLPS-Tra-1804 | Triticum aestivum | 40.3 | 3e-08 | 57.8 |
| LLPS-Brr-2899 | Brassica rapa | 40.0 | 1e-07 | 55.8 |
| LLPS-Art-1252 | Arabidopsis thaliana | 40.0 | 3e-07 | 55.1 |
| LLPS-Bro-0751 | Brassica oleracea | 40.0 | 1e-07 | 56.2 |
| LLPS-Brn-1359 | Brassica napus | 40.0 | 1e-07 | 55.8 |
| LLPS-Arl-2427 | Arabidopsis lyrata | 40.0 | 3e-07 | 55.1 |
| LLPS-Spr-1297 | Sporisorium reilianum | 38.71 | 8e-06 | 51.2 |
| LLPS-Sem-0455 | Selaginella moellendorffii | 38.24 | 4e-07 | 54.3 |
| LLPS-Abg-1011 | Absidia glauca | 37.7 | 1e-06 | 53.5 |
| LLPS-Brd-1326 | Brachypodium distachyon | 36.51 | 1e-07 | 55.8 |
| LLPS-Php-1572 | Physcomitrella patens | 35.48 | 3e-07 | 55.1 |