LLPS-Gaga-0609
MDH1
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Malate dehydrogenase, cytoplasmic; Cytosolic malate dehydrogenase |
Gene Name: | MDH1, RCJMB04_2g5 |
Ensembl Gene: | ENSGALG00000008858.7 |
Ensembl Protein: | ENSGALP00000051015.2 |
Organism: | Gallus gallus |
Taxa ID: | 9031 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Nucleolus, Postsynaptic density | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSGALT00000060054.2 | ENSGALP00000051015.2 |
Ensembl | ENSGALT00000014390.6 | ENSGALP00000014374.4 |
UniProt | Q5ZME2, MDHC_CHICK | |
GeneBank | AJ719442 | CAG31101.1 |
RefSeq | NM_001006395.2 | NP_001006395.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MGATRGLART PLPLQRHLAT SEAPLPAHAQ QPRGARCPPP SFLSGRRRLL PSRACARLAA 60 61 LEFNARPDRP LSDACANRKA NAVLTFIFQE RVRSARSRSS SPSGSREADG CNESARGAGR 120 121 RDNGANSVRG RGVRAPGHSG TCSSAAATTT QGGATRDYSS HAAARCGAPR PSAVPQRNAA 180 181 GGRSRAVEVT SRLLLGPLLP AMGEPIRVLV TGAAGQIAYS LLYSIAKGDV FGKEQPLVLV 240 241 LLDITPMMTV LEGVVMELQD CALPLLREVI PTDKEEVAFK DLDIAILVGS MPRREGMERK 300 301 DLLKANVKIF KSQGAALDKY AKKTVKVVVV GNPANTNCLI ASKSAPSIPK ENFSCLTRLD 360 361 HNRAKSQIAL KLGVTSNDVK NVIIWGNHSS TQYPDVNHAK VNVKGKEVGV YEAIKDDSWL 420 421 KGDFILTVQQ RGAAVIKARK LSSAMSAAKA ICDHVRDIWF GTPAGEFVSM GVISDGNSYG 480 481 VPEDLLYSFP VVIKDKTWKF VEGLPINDFS REKMDLTAKE LTEEKETAVE FLSSA 535 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGGCGCAA CCCGGGGTCT TGCGCGCACG CCGCTCCCGC TGCAGCGTCA CCTAGCAACC 60 61 AGCGAAGCAC CGCTACCTGC GCACGCGCAG CAGCCACGCG GCGCGCGATG TCCTCCTCCT 120 121 TCCTTCCTCT CCGGACGGCG CCGACTCCTC CCCTCGCGCG CATGCGCACG GCTGGCTGCT 180 181 CTTGAGTTCA ACGCGCGCCC CGACCGCCCT CTGTCTGACG CATGCGCAAA CCGAAAAGCC 240 241 AACGCCGTTT TAACCTTCAT CTTTCAGGAG CGCGTGCGCA GCGCTCGGAG CCGCTCATCG 300 301 TCCCCTAGCG GCTCTCGGGA GGCGGACGGT TGCAATGAAT CGGCCAGAGG GGCGGGGCGT 360 361 CGGGACAACG GCGCCAATAG CGTGCGGGGG CGCGGCGTGC GTGCCCCGGG GCACTCTGGG 420 421 ACCTGTAGTT CGGCCGCCGC CACAACAACG CAGGGCGGCG CGACTCGCGA CTACAGTTCC 480 481 CATGCAGCTG CGCGCTGCGG CGCGCCCCGC CCCTCCGCGG TGCCTCAGCG CAACGCCGCC 540 541 GGCGGTCGCA GTCGCGCCGT AGAGGTGACC TCGAGGCTGC TGCTCGGCCC GCTGCTCCCA 600 601 GCCATGGGTG AACCCATCAG AGTCCTGGTG ACCGGAGCTG CCGGGCAAAT TGCTTACTCC 660 661 CTGCTCTACA GCATCGCCAA GGGAGATGTC TTTGGCAAAG AGCAGCCTCT TGTGCTTGTG 720 721 CTGCTGGATA TCACCCCTAT GATGACTGTT TTGGAAGGCG TAGTGATGGA GCTGCAAGAC 780 781 TGTGCCCTGC CACTGCTGAG AGAGGTCATT CCAACAGACA AGGAGGAAGT TGCATTCAAA 840 841 GACCTTGACA TAGCAATTCT GGTTGGCTCC ATGCCGAGGA GAGAAGGCAT GGAGAGGAAG 900 901 GATTTGCTCA AAGCAAATGT GAAAATTTTC AAGTCTCAGG GTGCAGCTTT GGACAAATAT 960 961 GCCAAAAAGA CTGTGAAGGT GGTAGTAGTT GGGAATCCAG CAAATACTAA CTGTTTGATT 1020 1021 GCATCAAAGT CAGCCCCATC AATACCAAAG GAAAACTTCA GCTGCTTGAC TCGCTTGGAT 1080 1081 CACAACAGAG CTAAATCTCA GATTGCTCTG AAGCTTGGTG TGACTTCTAA CGATGTGAAG 1140 1141 AATGTCATCA TTTGGGGCAA CCACTCCTCC ACTCAGTATC CAGATGTTAA CCATGCAAAG 1200 1201 GTGAATGTGA AAGGAAAGGA AGTCGGAGTT TATGAAGCTA TAAAAGATGA CAGCTGGCTG 1260 1261 AAGGGAGACT TTATCCTGAC TGTTCAGCAA CGTGGAGCAG CTGTTATTAA GGCTAGGAAG 1320 1321 CTGTCCAGTG CGATGTCAGC TGCCAAAGCT ATCTGTGATC ATGTGAGAGA CATCTGGTTT 1380 1381 GGCACTCCAG CGGGAGAATT TGTTTCCATG GGAGTCATTT CTGATGGCAA TTCTTACGGC 1440 1441 GTTCCTGAAG ACCTGCTATA TTCATTCCCT GTTGTGATCA AGGACAAGAC CTGGAAGTTT 1500 1501 GTTGAGGGTC TTCCTATTAA TGACTTTTCT CGTGAGAAGA TGGATCTGAC TGCTAAGGAG 1560 1561 TTAACCGAAG AGAAGGAGAC AGCTGTGGAA TTCCTCTCCA GTGCATGA 1608 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Meg-2923 | Meleagris gallopavo | 100.0 | 0.0 | 635 |
LLPS-Anp-0106 | Anas platyrhynchos | 99.7 | 0.0 | 634 |
LLPS-Fia-3017 | Ficedula albicollis | 98.2 | 0.0 | 632 |
LLPS-Cea-3342 | Cercocebus atys | 92.91 | 1e-166 | 480 |
LLPS-Ora-2975 | Ornithorhynchus anatinus | 92.22 | 0.0 | 602 |
LLPS-Pes-2237 | Pelodiscus sinensis | 91.92 | 0.0 | 597 |
LLPS-Sah-2734 | Sarcophilus harrisii | 91.32 | 0.0 | 595 |
LLPS-Anc-2906 | Anolis carolinensis | 91.32 | 0.0 | 588 |
LLPS-Mal-2280 | Mandrillus leucophaeus | 91.27 | 0.0 | 590 |
LLPS-Paa-3993 | Papio anubis | 91.27 | 0.0 | 589 |
LLPS-Maf-3783 | Macaca fascicularis | 91.27 | 0.0 | 590 |
LLPS-Man-1053 | Macaca nemestrina | 91.27 | 0.0 | 591 |
LLPS-Mod-2924 | Monodelphis domestica | 91.24 | 0.0 | 588 |
LLPS-Aon-1581 | Aotus nancymaae | 90.96 | 0.0 | 589 |
LLPS-Nol-1611 | Nomascus leucogenys | 90.96 | 0.0 | 590 |
LLPS-Pat-4359 | Pan troglodytes | 90.96 | 0.0 | 590 |
LLPS-Pap-4223 | Pan paniscus | 90.85 | 0.0 | 583 |
LLPS-Chs-3026 | Chlorocebus sabaeus | 90.72 | 0.0 | 594 |
LLPS-Poa-1224 | Pongo abelii | 90.72 | 0.0 | 593 |
LLPS-Gog-0564 | Gorilla gorilla | 90.66 | 0.0 | 590 |
LLPS-Hos-3373 | Homo sapiens | 90.66 | 0.0 | 588 |
LLPS-Ran-2915 | Rattus norvegicus | 90.12 | 0.0 | 587 |
LLPS-Caj-4110 | Callithrix jacchus | 90.12 | 0.0 | 588 |
LLPS-Orc-3918 | Oryctolagus cuniculus | 90.12 | 0.0 | 588 |
LLPS-Fud-3111 | Fukomys damarensis | 89.82 | 0.0 | 590 |
LLPS-Cap-3928 | Cavia porcellus | 89.82 | 0.0 | 588 |
LLPS-Mam-3193 | Macaca mulatta | 89.61 | 0.0 | 588 |
LLPS-Mum-3564 | Mus musculus | 89.52 | 0.0 | 586 |
LLPS-Rhb-1541 | Rhinopithecus bieti | 89.46 | 0.0 | 573 |
LLPS-Sus-3527 | Sus scrofa | 89.22 | 0.0 | 584 |
LLPS-Ova-3459 | Ovis aries | 89.16 | 0.0 | 581 |
LLPS-Otg-1006 | Otolemur garnettii | 89.16 | 0.0 | 582 |
LLPS-Bot-1537 | Bos taurus | 88.92 | 0.0 | 584 |
LLPS-Eqc-4685 | Equus caballus | 88.92 | 0.0 | 583 |
LLPS-Myl-0953 | Myotis lucifugus | 88.86 | 0.0 | 579 |
LLPS-Mea-2907 | Mesocricetus auratus | 88.86 | 0.0 | 580 |
LLPS-Dio-4119 | Dipodomys ordii | 88.62 | 0.0 | 575 |
LLPS-Tut-1927 | Tursiops truncatus | 88.55 | 0.0 | 573 |
LLPS-Cas-1716 | Carlito syrichta | 88.55 | 0.0 | 573 |
LLPS-Ict-4545 | Ictidomys tridecemlineatus | 88.32 | 0.0 | 583 |
LLPS-Aim-2384 | Ailuropoda melanoleuca | 87.95 | 0.0 | 572 |
LLPS-Mup-1879 | Mustela putorius furo | 87.72 | 0.0 | 575 |
LLPS-Urm-3514 | Ursus maritimus | 87.72 | 0.0 | 575 |
LLPS-Caf-2799 | Canis familiaris | 87.65 | 0.0 | 568 |
LLPS-Fec-4070 | Felis catus | 87.13 | 0.0 | 567 |
LLPS-Lac-3514 | Latimeria chalumnae | 87.13 | 0.0 | 563 |
LLPS-Loa-2913 | Loxodonta africana | 87.05 | 0.0 | 562 |
LLPS-Leo-1013 | Lepisosteus oculatus | 85.71 | 0.0 | 555 |
LLPS-Asm-3627 | Astyanax mexicanus | 83.73 | 0.0 | 546 |
LLPS-Ten-3370 | Tetraodon nigroviridis | 82.53 | 0.0 | 546 |
LLPS-Scm-3983 | Scophthalmus maximus | 82.48 | 0.0 | 538 |
LLPS-Icp-3428 | Ictalurus punctatus | 82.44 | 0.0 | 549 |
LLPS-Orn-2752 | Oreochromis niloticus | 82.23 | 0.0 | 543 |
LLPS-Scf-3005 | Scleropages formosus | 81.52 | 0.0 | 537 |
LLPS-Dar-3425 | Danio rerio | 81.14 | 0.0 | 535 |
LLPS-Gaa-4015 | Gasterosteus aculeatus | 80.85 | 0.0 | 532 |
LLPS-Pof-3720 | Poecilia formosa | 80.72 | 0.0 | 533 |
LLPS-Orl-1482 | Oryzias latipes | 78.55 | 0.0 | 537 |
LLPS-Tar-2630 | Takifugu rubripes | 78.31 | 2e-178 | 513 |
LLPS-Xim-2030 | Xiphophorus maculatus | 78.26 | 0.0 | 535 |
LLPS-Drm-1019 | Drosophila melanogaster | 68.37 | 3e-135 | 403 |
LLPS-Cae-1444 | Caenorhabditis elegans | 63.06 | 4e-123 | 372 |
LLPS-Met-1229 | Medicago truncatula | 60.58 | 4e-118 | 359 |
LLPS-Arl-0504 | Arabidopsis lyrata | 60.26 | 2e-118 | 360 |
LLPS-Sem-2245 | Selaginella moellendorffii | 60.26 | 8e-114 | 348 |
LLPS-Art-1156 | Arabidopsis thaliana | 60.26 | 2e-118 | 360 |
LLPS-Cus-1089 | Cucumis sativus | 60.06 | 4e-116 | 354 |
LLPS-Glm-1074 | Glycine max | 59.94 | 2e-115 | 352 |
LLPS-Brn-3007 | Brassica napus | 59.62 | 2e-116 | 354 |
LLPS-Mae-1764 | Manihot esculenta | 59.62 | 3e-116 | 354 |
LLPS-Prp-2029 | Prunus persica | 59.29 | 5e-113 | 347 |
LLPS-Brr-0198 | Brassica rapa | 59.29 | 6e-116 | 353 |
LLPS-Bro-2948 | Brassica oleracea | 58.97 | 3e-116 | 354 |
LLPS-Gor-2699 | Gossypium raimondii | 58.79 | 2e-112 | 344 |
LLPS-Tra-1920 | Triticum aestivum | 58.73 | 5e-115 | 351 |
LLPS-Sot-2284 | Solanum tuberosum | 58.65 | 1e-115 | 352 |
LLPS-Mua-0830 | Musa acuminata | 58.65 | 9e-114 | 348 |
LLPS-Nia-1685 | Nicotiana attenuata | 58.65 | 3e-115 | 352 |
LLPS-Zem-2094 | Zea mays | 58.42 | 4e-110 | 338 |
LLPS-Hea-0474 | Helianthus annuus | 58.36 | 6e-117 | 358 |
LLPS-Dac-2163 | Daucus carota | 58.04 | 2e-99 | 310 |
LLPS-Orni-1088 | Oryza nivara | 57.75 | 2e-111 | 342 |
LLPS-Sol-1530 | Solanum lycopersicum | 57.68 | 5e-114 | 348 |
LLPS-Php-2047 | Physcomitrella patens | 57.37 | 6e-111 | 340 |
LLPS-Orb-1627 | Oryza barthii | 57.14 | 2e-110 | 340 |
LLPS-Orr-2373 | Oryza rufipogon | 57.14 | 2e-110 | 340 |
LLPS-Ors-0607 | Oryza sativa | 57.14 | 2e-110 | 340 |
LLPS-Brd-2071 | Brachypodium distachyon | 56.73 | 4e-110 | 339 |
LLPS-Lep-0777 | Leersia perrieri | 56.73 | 1e-109 | 338 |
LLPS-Orm-1808 | Oryza meridionalis | 56.53 | 8e-109 | 335 |
LLPS-Orp-0091 | Oryza punctata | 56.23 | 7e-109 | 336 |
LLPS-Orbr-1696 | Oryza brachyantha | 56.09 | 1e-108 | 335 |
LLPS-Sei-2292 | Setaria italica | 55.22 | 1e-106 | 330 |
LLPS-Sob-2072 | Sorghum bicolor | 54.98 | 6e-109 | 336 |
LLPS-Orgl-0369 | Oryza glumaepatula | 50.4 | 9e-101 | 317 |
LLPS-Vir-0288 | Vigna radiata | 50.0 | 5e-76 | 252 |
LLPS-Coc-2028 | Corchorus capsularis | 47.71 | 5e-77 | 256 |
LLPS-Via-1645 | Vigna angularis | 47.59 | 6e-78 | 258 |
LLPS-Ori-1844 | Oryza indica | 47.42 | 7e-79 | 261 |
LLPS-Viv-0001 | Vitis vinifera | 47.39 | 5e-75 | 251 |
LLPS-Phv-1826 | Phaseolus vulgaris | 47.27 | 1e-77 | 258 |
LLPS-Hov-1051 | Hordeum vulgare | 47.21 | 6e-78 | 258 |
LLPS-Pot-0384 | Populus trichocarpa | 46.73 | 3e-74 | 249 |
LLPS-Chc-1233 | Chondrus crispus | 46.3 | 2e-70 | 236 |
LLPS-Thc-0325 | Theobroma cacao | 46.08 | 3e-73 | 246 |
LLPS-Tru-0620 | Triticum urartu | 45.42 | 7e-61 | 211 |
LLPS-Org-0858 | Oryza glaberrima | 32.32 | 9e-07 | 55.1 |
LLPS-Tag-1974 | Taeniopygia guttata | 27.96 | 5e-31 | 129 |
LLPS-Amt-2136 | Amborella trichopoda | 27.68 | 4e-09 | 63.2 |
LLPS-Cis-1122 | Ciona savignyi | 26.36 | 6e-26 | 114 |