LLPS-Gaa-3282
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Runt-related transcription factor |
Ensembl Gene: | ENSGACG00000012322.1 |
Ensembl Protein: | ENSGACP00000016296.1 |
Organism: | Gasterosteus aculeatus |
Taxa ID: | 69293 |
LLPS Type: | Regulator |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
PML nuclear body | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSGACT00000016328.1 | ENSGACP00000016296.1 |
UniProt | G3PFC2, G3PFC2_GASAC |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MASNSLFSTV TPCQQNFFWD PSASRRFSPP SNSLQPVSGK MNDVSSPTGQ PDAAAVPRLR 60 61 PHENRSMAEI IADHPAELVR TDSPNFLCSV LPSHWRCNKT LPVAFKVVAL GDISDGTVVT 120 121 VMAGNDENYS AELRNASGVM KNQVARFNDL RFVGRSGRGK SFTLTITVFT NPPQVATYHR 180 181 AIKVTVDGPR EPRRHRQKLE DPPKSGLFSD RLSELERMRV RVAIPTQGPR PTLNTGAASF 240 241 NPQGQTQITD PRQSQSSPPW SYEQTYPSYL SPMASPSVHS TTPLSSSRGT GLPAISDVPR 300 301 RLPGSSDLSP FPAQFERQFP GLPPLAETRF SSPRMHYPAT FTYTPPVTSA MSLGSAHYHT 360 361 YLPPPYPGST QTQSGPFQTS STPYLYYGAS SGSYQFSMVP GGDRSPSRMI PPCTSASTGT 420 421 SLVNPNLPSQ SEGGVDADGS HSNSPTVLNP GGRMDEAVWR PY 462 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGCATCCA ACAGCCTCTT CAGCACCGTG ACGCCATGTC AGCAGAACTT CTTCTGGGAT 60 61 CCCAGCGCGA GTCGGAGGTT CAGCCCGCCG TCCAACAGCC TCCAGCCGGT CTCCGGGAAG 120 121 ATGAACGATG TGAGCTCTCC TACCGGCCAG CCGGACGCGG CGGCGGTGCC AAGACTGCGG 180 181 CCCCACGAAA ACCGCAGCAT GGCCGAGATC ATCGCCGACC ACCCGGCCGA GCTGGTCCGG 240 241 ACCGACAGCC CCAACTTCCT CTGCTCGGTG CTGCCCTCCC ACTGGCGGTG CAACAAGACG 300 301 CTGCCCGTCG CCTTCAAGGT GGTAGCCCTG GGTGACATAT CTGATGGGAC CGTTGTCACG 360 361 GTGATGGCGG GCAACGACGA GAACTACTCG GCCGAGCTGC GGAACGCCTC GGGCGTGATG 420 421 AAGAACCAAG TGGCGCGCTT CAACGACCTC CGCTTCGTGG GCCGCAGCGG CAGAGGCAAG 480 481 AGCTTCACGC TGACAATCAC GGTATTCACC AACCCGCCAC AAGTGGCCAC TTACCACCGC 540 541 GCCATAAAGG TCACCGTGGA TGGACCGCGT GAGCCCAGGA GACATCGTCA GAAACTTGAG 600 601 GACCCTCCCA AAAGCGGCCT CTTCTCAGAC CGCCTTAGTG AGCTGGAGAG GATGAGGGTG 660 661 AGGGTCGCCA TTCCCACTCA GGGCCCCCGG CCAACTCTCA ACACGGGGGC CGCCTCCTTC 720 721 AACCCGCAGG GACAGACGCA GATCACAGAC CCCCGTCAGT CGCAGTCGTC TCCTCCCTGG 780 781 TCCTACGAGC AGACGTACCC GTCCTACCTG AGTCCCATGG CGTCGCCCTC CGTCCACTCC 840 841 ACCACGCCGC TCTCCTCCAG CCGGGGCACG GGTCTGCCCG CCATCAGCGA CGTGCCCAGA 900 901 CGACTGCCAG GTTCCTCTGA TCTGAGCCCG TTCCCCGCTC AGTTCGAGCG CCAGTTCCCC 960 961 GGCCTGCCCC CCCTGGCCGA GACCCGCTTC TCCAGCCCGC GGATGCACTA CCCGGCCACC 1020 1021 TTCACCTACA CCCCGCCGGT CACCTCCGCC ATGTCGCTGG GCAGCGCCCA CTACCACACC 1080 1081 TACCTTCCCC CCCCCTACCC GGGCTCCACC CAGACCCAGA GCGGACCCTT CCAGACCAGC 1140 1141 AGCACGCCGT ATCTCTACTA CGGCGCCTCG TCCGGCTCCT ACCAGTTCTC CATGGTCCCC 1200 1201 GGGGGGGATC GCTCGCCCTC CCGGATGATC CCGCCTTGCA CTAGCGCCTC CACGGGCACC 1260 1261 TCCCTGGTGA ACCCCAACCT GCCCAGCCAG TCGGAGGGAG GCGTGGACGC CGACGGGAGC 1320 1321 CACAGCAACT CCCCCACCGT GCTCAACCCC GGGGGCCGCA TGGACGAGGC CGTCTGGAGG 1380 1381 CCGTATTGA 1389 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Ora-1144 | Ornithorhynchus anatinus | 97.22 | 8e-42 | 149 |
LLPS-Urm-0270 | Ursus maritimus | 97.22 | 3e-15 | 76.6 |
LLPS-Scm-3696 | Scophthalmus maximus | 95.25 | 0.0 | 872 |
LLPS-Orn-2416 | Oreochromis niloticus | 95.03 | 0.0 | 873 |
LLPS-Tar-3407 | Takifugu rubripes | 94.38 | 0.0 | 891 |
LLPS-Ten-3737 | Tetraodon nigroviridis | 94.17 | 0.0 | 891 |
LLPS-Xim-1941 | Xiphophorus maculatus | 93.75 | 0.0 | 861 |
LLPS-Pof-2471 | Poecilia formosa | 93.33 | 0.0 | 853 |
LLPS-Cea-2736 | Cercocebus atys | 88.89 | 2e-08 | 61.2 |
LLPS-Leo-0656 | Lepisosteus oculatus | 85.14 | 0.0 | 796 |
LLPS-Asm-1441 | Astyanax mexicanus | 84.63 | 0.0 | 717 |
LLPS-Dar-1711 | Danio rerio | 82.66 | 0.0 | 757 |
LLPS-Icp-2623 | Ictalurus punctatus | 81.72 | 0.0 | 744 |
LLPS-Scf-1396 | Scleropages formosus | 81.58 | 0.0 | 676 |
LLPS-Chs-1836 | Chlorocebus sabaeus | 78.49 | 0.0 | 670 |
LLPS-Myl-2204 | Myotis lucifugus | 78.18 | 0.0 | 564 |
LLPS-Pes-3258 | Pelodiscus sinensis | 77.75 | 0.0 | 563 |
LLPS-Meg-0158 | Meleagris gallopavo | 77.69 | 0.0 | 560 |
LLPS-Anp-2888 | Anas platyrhynchos | 77.69 | 0.0 | 562 |
LLPS-Gaga-3655 | Gallus gallus | 77.62 | 0.0 | 712 |
LLPS-Anc-1536 | Anolis carolinensis | 77.2 | 0.0 | 712 |
LLPS-Lac-2221 | Latimeria chalumnae | 77.01 | 9e-86 | 268 |
LLPS-Fia-3679 | Ficedula albicollis | 76.96 | 0.0 | 565 |
LLPS-Drm-1936 | Drosophila melanogaster | 76.86 | 1e-55 | 202 |
LLPS-Xet-2572 | Xenopus tropicalis | 76.52 | 0.0 | 710 |
LLPS-Otg-2812 | Otolemur garnettii | 76.15 | 0.0 | 656 |
LLPS-Ict-1385 | Ictidomys tridecemlineatus | 75.61 | 2e-95 | 301 |
LLPS-Cii-1095 | Ciona intestinalis | 74.75 | 3e-38 | 149 |
LLPS-Cis-1246 | Ciona savignyi | 74.62 | 1e-64 | 213 |
LLPS-Mal-2840 | Mandrillus leucophaeus | 74.51 | 4e-153 | 451 |
LLPS-Mod-2250 | Monodelphis domestica | 74.4 | 0.0 | 717 |
LLPS-Tag-2807 | Taeniopygia guttata | 74.3 | 0.0 | 695 |
LLPS-Gog-3547 | Gorilla gorilla | 74.19 | 2e-157 | 464 |
LLPS-Man-2816 | Macaca nemestrina | 73.98 | 2e-157 | 464 |
LLPS-Pat-0802 | Pan troglodytes | 73.96 | 0.0 | 702 |
LLPS-Paa-1716 | Papio anubis | 73.76 | 3e-156 | 464 |
LLPS-Hos-3731 | Homo sapiens | 73.62 | 2e-157 | 464 |
LLPS-Eqc-4614 | Equus caballus | 73.55 | 5e-155 | 462 |
LLPS-Rhb-3640 | Rhinopithecus bieti | 73.33 | 5e-156 | 463 |
LLPS-Orc-1862 | Oryctolagus cuniculus | 71.96 | 6e-127 | 377 |
LLPS-Fec-1727 | Felis catus | 71.84 | 0.0 | 693 |
LLPS-Caj-3185 | Callithrix jacchus | 71.43 | 0.0 | 692 |
LLPS-Aon-4180 | Aotus nancymaae | 71.43 | 0.0 | 692 |
LLPS-Bot-2870 | Bos taurus | 71.37 | 0.0 | 689 |
LLPS-Poa-0171 | Pongo abelii | 71.16 | 0.0 | 691 |
LLPS-Sus-3940 | Sus scrofa | 71.1 | 0.0 | 689 |
LLPS-Maf-4140 | Macaca fascicularis | 71.02 | 0.0 | 692 |
LLPS-Mam-3724 | Macaca mulatta | 71.02 | 0.0 | 691 |
LLPS-Dio-3886 | Dipodomys ordii | 70.79 | 0.0 | 669 |
LLPS-Pap-2989 | Pan paniscus | 70.63 | 0.0 | 694 |
LLPS-Ran-4131 | Rattus norvegicus | 69.91 | 0.0 | 686 |
LLPS-Mum-2215 | Mus musculus | 69.66 | 0.0 | 682 |
LLPS-Aim-0378 | Ailuropoda melanoleuca | 69.23 | 0.0 | 602 |
LLPS-Mup-1543 | Mustela putorius furo | 69.18 | 0.0 | 579 |
LLPS-Fud-1510 | Fukomys damarensis | 68.98 | 0.0 | 654 |
LLPS-Caf-1289 | Canis familiaris | 67.57 | 2e-127 | 379 |
LLPS-Ova-2079 | Ovis aries | 67.24 | 0.0 | 583 |
LLPS-Nol-1515 | Nomascus leucogenys | 65.77 | 5e-125 | 380 |
LLPS-Loa-1968 | Loxodonta africana | 64.0 | 0.0 | 595 |
LLPS-Cap-0908 | Cavia porcellus | 62.5 | 0.0 | 545 |
LLPS-Sah-0149 | Sarcophilus harrisii | 61.95 | 0.0 | 553 |
LLPS-Tut-1758 | Tursiops truncatus | 57.38 | 3e-152 | 447 |
LLPS-Mea-2403 | Mesocricetus auratus | 54.9 | 6e-146 | 431 |
LLPS-Orl-0455 | Oryzias latipes | 52.62 | 2e-139 | 414 |
LLPS-Cae-0781 | Caenorhabditis elegans | 52.59 | 2e-31 | 126 |