LLPS-Fia-1191
CTCF
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | CCCTC-binding factor |
Gene Name: | CTCF |
Ensembl Gene: | ENSFALG00000007163.1 |
Ensembl Protein: | ENSFALP00000007480.1 |
Organism: | Ficedula albicollis |
Taxa ID: | 59894 |
LLPS Type: | LLPS regulator |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Chromatin, Histone locus body, Insulator body, PcG body, Centrosome/Spindle pole body | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSFALT00000007512.1 | ENSFALP00000007480.1 |
Ensembl | ENSFALT00000007511.1 | ENSFALP00000007479.1 |
UniProt | U3JXH5, U3JXH5_FICAL | |
GeneBank | AGTO01010687 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MEGEAVDAIV EESETFIKGK ERKTYQRRRE GGQEDDACHI PANQADGGEV VQDVSSGVQM 60 61 VMMDQLDPTL LQMKTEVMEG AVPQETEATV DDTQIITLQV VNMEEQPINL GELQLVQVPV 120 121 PVTVPVATTS VEELQGAYEN EVSKGGLQEG EPMICHTLPL PEGFQVVKVG ANGEVETLEQ 180 181 GELQPQEDPN WQKDPDYQPP AKKTKKNKKS KLRYTEEGKD VDVSVYDFEE EQQEGLLSEV 240 241 NAEKVVGNMK PPKPTKIKKK GPGVKKTFQC ELCSYTCPRR SNLDRHMKSH TDERPHKCHL 300 301 CGRAFRTVTL LRNHLNTHTG TRPHKCPDCD MAFVTSGELV RHRRYKHTHE KPFKCSMCDY 360 361 ASVEVSKLKR HIRSHTGERP FQCSLCSYAS RDTYKLKRHM RTHSEGEKPY ECYICHARFT 420 421 QSGTMKMHIL QKHTENVAKF HCPHCDTVIA RKSDLGVHLR KQHSYIEQGK KCRYCDAVFH 480 481 ERYALIQHQK SHKNEKRFKC DQCDYACRQE RHMVMHKRTH TGEKPYACSH CDKTFRQKQL 540 541 LDMHFKRYHD PNFVPAAFVC SKCGKTFTRR NTMARHADNC SGLDGGEGEN GGETKKGKRG 600 601 RKRKMRSKKE DSSDSEENAE PDLDDNEDEE ETAVEIEAEP EVEQEAPAPP PSKKRRGRPP 660 661 GKAAAQPKQS QPAAIIQVED QNTGEIENII VEVKKEPDAE TAEEEEEAQP AVVEAPNGDL 720 721 TPEMILSMMD R 731 |
Nucleotide CDS Sequence (FASTA) |
1 ATGAAGAGAA CAAATCAGTC CAGGCAGAAG TGCAGAAGCG TCGAGAACAT AAATCAGGAA 60 61 GGTGAAATGG AAGGTGAGGC AGTCGACGCT ATTGTGGAGG AATCAGAAAC TTTCATTAAG 120 121 GGAAAAGAGA GGAAAACTTA TCAAAGACGC CGTGAAGAAG GCTTCCAAGT CGTGAAAGTG 180 181 GGTGCAAATG GTGAGGTGGA GACACTGGAA CAAGGTGAAC TTCAGCCACA GGAAGATCCC 240 241 AATTGGCAAA AAGATCCAGA CTATCAGCCA CCAGCCAAAA AAACAAAGAA AAACAAAAAG 300 301 AGTAAGCTTC GCTACACTGA GGAAGGCAAA GATGTGGATG TCTCTGTATA TGACTTTGAA 360 361 GAGGAGCAGC AGGAGGGTTT GTTGTCCGAG GTTAATGCAG AAAAGGTGGT GGGCAATATG 420 421 AAACCACCAA AACCAACAAA AATTAAAAAG AAAGGTGTAA AGAAGACATT CCAGTGTGAA 480 481 CTGTGCAGTT ACACTTGTCC GCGTCGTTCC AACTTGGACC GCCACATGAA AAGCCACACC 540 541 GATGAAAGAC CACACAAGTG CCATCTCTGT GGCAGGGCTT TCCGGACAGT CACATTGCTG 600 601 AGGAACCACC TCAACACTCA CACAGGTACT CGCCCTCACA AGTGCCCAGA CTGCGACATG 660 661 GCCTTTGTGA CCAGTGGAGA GTTGGTTCGG CATCGCCGCT ACAAACACAC CCACGAGAAA 720 721 CCATTCAAAT GTTCCATGTG TGACTATGCC AGTGTGGAGG TTAGCAAATT GAAACGCCAC 780 781 ATCCGCTCGC ACACCGGAGA GCGCCCGTTC CAGTGCAGCC TGTGCAGCTA TGCCAGCAGA 840 841 GACACCTACA AACTGAAGAG GCACATGAGG ACCCACTCCG GAGAGAAGCC ATATGAATGT 900 901 TACATCTGCC ACGCTCGCTT CACTCAGAGC GGTACCATGA AGATGCACAT TTTGCAGAAG 960 961 CACACGGAGA ATGTGGCCAA ATTCCACTGC CCTCACTGTG ATACTGTTAT AGCGAGAAAG 1020 1021 AGTGACCTGG GTGTCCACTT GCGGAAGCAG CATTCCTACA TTGAGCAGGG CAAGAAGTGT 1080 1081 CGCTACTGTG ACGCTGTGTT CCATGAGAGG TATGCCCTCA TCCAGCATCA AAAGTCCCAC 1140 1141 AAGAATGAGA AGCGCTTCAA GTGTGACCAG TGTGATTATG CCTGCAGACA GGAGCGGCAC 1200 1201 ATGGTCATGC ACAAACGGAC CCATACTGGA GAAAAGCCTT ATGCCTGTAG CCATTGTGAT 1260 1261 AAAACCTTCC GCCAGAAGCA GCTCCTCGAC ATGCACTTCA AGAGATACCA CGATCCCAAC 1320 1321 TTTGTCCCTG CTGCCTTTGT CTGCTCCAAG TGTGGCAAAA CGTTCACTCG CAGGAACACA 1380 1381 ATGGCCAGAC ATGCTGATAA CTGCTCTGGC CTAGATGGTG GGGAAGGAGA GAATGGAGGA 1440 1441 GAGACAAAGA AAGGCAAACG TGGCCGAAAG AGAAAGATGC GTTCCAAGAA AGAAGATTCT 1500 1501 TCTGATAGTG AGGAAAATGC TGAACCAGAT TTGGATGATA ATGAAGATGA GGAGGAGACA 1560 1561 GCAGTAGAAA TTGAGGCTGA ACCAGAAGTT GAGCAAGAGG CTCCTGCACC ACCTCCCAGT 1620 1621 AAGAAAAGAA GAGGAAGACC ACCAGGCAAA GCTGCCGCTC AACCAAAACA ATCCCAGCCT 1680 1681 GCAGCAATCA TTCAGGTTGA AGACCAGAAC ACTGGTGAAA TTGAAAATAT TATAGTTGAA 1740 1741 GTGAAGAAAG AACCTGATGC AGAAACAGCA GAGGAAGAGG AAGAAGCTCA GCCTGCTGTA 1800 1801 GTGGAAGCTC CCAACGGAGA CCTCACCCCT GAGATGATTC TCAGCATGAT GGACCGGTGA 1860 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Nol-3414 | Nomascus leucogenys | 98.43 | 0.0 | 530 |
LLPS-Meg-2402 | Meleagris gallopavo | 98.29 | 0.0 | 1104 |
LLPS-Tag-1169 | Taeniopygia guttata | 98.03 | 0.0 | 935 |
LLPS-Anp-2470 | Anas platyrhynchos | 97.95 | 0.0 | 1108 |
LLPS-Gaga-2071 | Gallus gallus | 97.77 | 0.0 | 1100 |
LLPS-Ora-0240 | Ornithorhynchus anatinus | 97.3 | 4e-154 | 457 |
LLPS-Pes-2131 | Pelodiscus sinensis | 96.23 | 0.0 | 1088 |
LLPS-Anc-3375 | Anolis carolinensis | 95.21 | 0.0 | 1072 |
LLPS-Mod-1025 | Monodelphis domestica | 95.21 | 0.0 | 1076 |
LLPS-Tut-0115 | Tursiops truncatus | 95.03 | 0.0 | 1056 |
LLPS-Sus-1359 | Sus scrofa | 95.03 | 0.0 | 1070 |
LLPS-Loa-2074 | Loxodonta africana | 95.03 | 0.0 | 1056 |
LLPS-Ran-3549 | Rattus norvegicus | 94.86 | 0.0 | 1068 |
LLPS-Mal-1745 | Mandrillus leucophaeus | 94.86 | 0.0 | 1068 |
LLPS-Paa-4658 | Papio anubis | 94.86 | 0.0 | 1068 |
LLPS-Bot-1286 | Bos taurus | 94.86 | 0.0 | 1055 |
LLPS-Maf-0178 | Macaca fascicularis | 94.86 | 0.0 | 1068 |
LLPS-Mea-1487 | Mesocricetus auratus | 94.86 | 0.0 | 1068 |
LLPS-Aon-2267 | Aotus nancymaae | 94.86 | 0.0 | 1067 |
LLPS-Cea-0555 | Cercocebus atys | 94.86 | 0.0 | 1068 |
LLPS-Cas-1031 | Carlito syrichta | 94.86 | 0.0 | 1067 |
LLPS-Ict-2757 | Ictidomys tridecemlineatus | 94.86 | 0.0 | 1070 |
LLPS-Eqc-0864 | Equus caballus | 94.86 | 0.0 | 1070 |
LLPS-Mam-1147 | Macaca mulatta | 94.86 | 0.0 | 1068 |
LLPS-Otg-2781 | Otolemur garnettii | 94.86 | 0.0 | 1067 |
LLPS-Rhb-2946 | Rhinopithecus bieti | 94.86 | 0.0 | 1068 |
LLPS-Orc-1297 | Oryctolagus cuniculus | 94.86 | 0.0 | 1069 |
LLPS-Urm-0651 | Ursus maritimus | 94.86 | 0.0 | 1068 |
LLPS-Man-3358 | Macaca nemestrina | 94.86 | 0.0 | 1068 |
LLPS-Aim-0292 | Ailuropoda melanoleuca | 94.69 | 0.0 | 1067 |
LLPS-Mup-3922 | Mustela putorius furo | 94.69 | 0.0 | 1067 |
LLPS-Gog-0091 | Gorilla gorilla | 94.69 | 0.0 | 1066 |
LLPS-Caj-2270 | Callithrix jacchus | 94.69 | 0.0 | 1066 |
LLPS-Chs-2050 | Chlorocebus sabaeus | 94.69 | 0.0 | 1066 |
LLPS-Mum-2510 | Mus musculus | 94.69 | 0.0 | 1065 |
LLPS-Poa-0146 | Pongo abelii | 94.69 | 0.0 | 1066 |
LLPS-Caf-2550 | Canis familiaris | 94.69 | 0.0 | 1067 |
LLPS-Hos-1485 | Homo sapiens | 94.69 | 0.0 | 1066 |
LLPS-Pat-3169 | Pan troglodytes | 94.69 | 0.0 | 1066 |
LLPS-Pap-2152 | Pan paniscus | 94.69 | 0.0 | 1066 |
LLPS-Fec-2373 | Felis catus | 94.52 | 0.0 | 1064 |
LLPS-Myl-0739 | Myotis lucifugus | 94.35 | 0.0 | 1062 |
LLPS-Fud-1045 | Fukomys damarensis | 94.35 | 0.0 | 1066 |
LLPS-Dio-1330 | Dipodomys ordii | 93.21 | 0.0 | 1030 |
LLPS-Sah-0973 | Sarcophilus harrisii | 91.64 | 0.0 | 1011 |
LLPS-Ova-1913 | Ovis aries | 90.26 | 0.0 | 987 |
LLPS-Cap-1452 | Cavia porcellus | 89.38 | 0.0 | 999 |
LLPS-Xet-1421 | Xenopus tropicalis | 88.53 | 0.0 | 988 |
LLPS-Lac-1152 | Latimeria chalumnae | 85.29 | 0.0 | 992 |
LLPS-Ten-0826 | Tetraodon nigroviridis | 81.48 | 0.0 | 832 |
LLPS-Orn-2077 | Oreochromis niloticus | 79.57 | 0.0 | 820 |
LLPS-Gaa-3265 | Gasterosteus aculeatus | 79.34 | 0.0 | 822 |
LLPS-Leo-0791 | Lepisosteus oculatus | 79.05 | 0.0 | 840 |
LLPS-Scf-1125 | Scleropages formosus | 78.56 | 0.0 | 914 |
LLPS-Dar-0546 | Danio rerio | 77.67 | 0.0 | 885 |
LLPS-Pof-1668 | Poecilia formosa | 77.37 | 0.0 | 835 |
LLPS-Scm-0983 | Scophthalmus maximus | 77.35 | 0.0 | 821 |
LLPS-Xim-1710 | Xiphophorus maculatus | 76.84 | 0.0 | 831 |
LLPS-Asm-0974 | Astyanax mexicanus | 75.91 | 0.0 | 885 |
LLPS-Orl-0609 | Oryzias latipes | 75.83 | 0.0 | 816 |
LLPS-Icp-2536 | Ictalurus punctatus | 75.39 | 0.0 | 888 |
LLPS-Tar-0853 | Takifugu rubripes | 74.87 | 0.0 | 827 |
LLPS-Cii-0138 | Ciona intestinalis | 64.0 | 2e-82 | 278 |
LLPS-Drm-0068 | Drosophila melanogaster | 45.22 | 1e-81 | 283 |