LLPS-Dio-2047
Cbx1
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | chromobox protein homolog 1 isoform X1 |
| Gene Name: | Cbx1 |
| Ensembl Gene: | ENSDORG00000026399.1 |
| Ensembl Protein: | ENSDORP00000016018.1 |
| Organism: | Dipodomys ordii |
| Taxa ID: | 10020 |
| LLPS Type: | Scaffold |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Chromatin, Nucleolus, PML nuclear body, Stress granule | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | ENSDORT00000035331.1 | ENSDORP00000016018.1 |
| UniProt | A0A1S3GXQ4, A0A1S3GXQ4_DIPOR | |
| RefSeq | , XM_013038112.1 | , XP_012893566.1, XP_012893566.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MGKKQNKKKV EEVLEEEEEE YVVEKVLDRR VVKGKVEYLL KWKGFSDEDN TWEPEENLDC 60 61 PDLIAEFLQS QKTAHETDKS EGGKRKADSD SEDKGEESKP KKKKEESEKP RGFARGLEPE 120 121 RIIGATDSSG ELMFLMKWKN SDEADLVPAK EANVKCPQVV ISFYEERLTW HSYPSEDDDK 180 181 KDDKN 185 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGGAAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAGGA GGAAGAGGAA 60 61 TATGTGGTGG AAAAAGTTCT TGACCGTCGA GTTGTAAAGG GCAAAGTGGA ATACCTTCTA 120 121 AAGTGGAAGG GTTTCTCAGA TGAGGACAAT ACATGGGAGC CAGAAGAGAA CCTGGATTGT 180 181 CCCGACCTCA TTGCTGAGTT TCTACAGTCA CAGAAAACGG CACATGAGAC AGACAAATCA 240 241 GAGGGGGGCA AGCGTAAAGC TGATTCTGAT TCTGAAGATA AGGGAGAGGA AAGCAAACCA 300 301 AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCGGAG 360 361 CGGATTATTG GAGCTACAGA CTCCAGCGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC 420 421 TCTGATGAGG CTGATCTAGT CCCTGCCAAG GAAGCTAATG TCAAGTGCCC ACAGGTTGTC 480 481 ATATCCTTCT ATGAGGAAAG GTTGACGTGG CATTCCTACC CCTCAGAGGA TGACGACAAA 540 541 AAAGACGACA AGAATTAA 558 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Mup-1621 | Mustela putorius furo | 100.0 | 2e-83 | 251 |
| LLPS-Ova-0804 | Ovis aries | 100.0 | 2e-83 | 251 |
| LLPS-Paa-0377 | Papio anubis | 100.0 | 1e-82 | 252 |
| LLPS-Mal-4285 | Mandrillus leucophaeus | 100.0 | 1e-82 | 252 |
| LLPS-Bot-3807 | Bos taurus | 100.0 | 2e-83 | 251 |
| LLPS-Gog-3840 | Gorilla gorilla | 100.0 | 2e-83 | 251 |
| LLPS-Caj-3167 | Callithrix jacchus | 100.0 | 2e-83 | 251 |
| LLPS-Chs-3876 | Chlorocebus sabaeus | 100.0 | 6e-83 | 253 |
| LLPS-Maf-3754 | Macaca fascicularis | 100.0 | 1e-82 | 252 |
| LLPS-Mum-1049 | Mus musculus | 100.0 | 2e-83 | 251 |
| LLPS-Cea-0681 | Cercocebus atys | 100.0 | 1e-82 | 253 |
| LLPS-Sus-1468 | Sus scrofa | 100.0 | 2e-83 | 251 |
| LLPS-Cas-1052 | Carlito syrichta | 100.0 | 2e-83 | 251 |
| LLPS-Ict-0837 | Ictidomys tridecemlineatus | 100.0 | 2e-83 | 251 |
| LLPS-Nol-3287 | Nomascus leucogenys | 100.0 | 2e-83 | 254 |
| LLPS-Poa-2678 | Pongo abelii | 100.0 | 2e-83 | 251 |
| LLPS-Caf-0837 | Canis familiaris | 100.0 | 2e-83 | 251 |
| LLPS-Mam-4387 | Macaca mulatta | 100.0 | 1e-82 | 253 |
| LLPS-Otg-2272 | Otolemur garnettii | 100.0 | 7e-84 | 253 |
| LLPS-Fec-2764 | Felis catus | 100.0 | 2e-83 | 251 |
| LLPS-Pat-0437 | Pan troglodytes | 100.0 | 4e-83 | 254 |
| LLPS-Urm-0765 | Ursus maritimus | 100.0 | 2e-83 | 251 |
| LLPS-Pap-0987 | Pan paniscus | 100.0 | 5e-83 | 253 |
| LLPS-Hos-2672 | Homo sapiens | 100.0 | 2e-83 | 251 |
| LLPS-Loa-0624 | Loxodonta africana | 100.0 | 2e-83 | 251 |
| LLPS-Man-1336 | Macaca nemestrina | 100.0 | 6e-83 | 253 |
| LLPS-Fud-0050 | Fukomys damarensis | 99.37 | 3e-89 | 266 |
| LLPS-Ran-2093 | Rattus norvegicus | 99.33 | 6e-83 | 250 |
| LLPS-Myl-2811 | Myotis lucifugus | 99.33 | 2e-83 | 251 |
| LLPS-Cap-1020 | Cavia porcellus | 99.33 | 1e-84 | 255 |
| LLPS-Eqc-2851 | Equus caballus | 98.23 | 1e-50 | 168 |
| LLPS-Ora-2365 | Ornithorhynchus anatinus | 97.48 | 9e-88 | 263 |
| LLPS-Sah-2723 | Sarcophilus harrisii | 97.33 | 1e-82 | 249 |
| LLPS-Mod-3756 | Monodelphis domestica | 97.33 | 1e-82 | 249 |
| LLPS-Rhb-1348 | Rhinopithecus bieti | 95.73 | 7e-52 | 170 |
| LLPS-Gaga-0890 | Gallus gallus | 94.97 | 1e-86 | 260 |
| LLPS-Anp-1660 | Anas platyrhynchos | 94.97 | 5e-86 | 259 |
| LLPS-Fia-2969 | Ficedula albicollis | 94.7 | 6e-66 | 206 |
| LLPS-Tag-1939 | Taeniopygia guttata | 94.64 | 2e-50 | 166 |
| LLPS-Pes-1630 | Pelodiscus sinensis | 94.34 | 1e-86 | 260 |
| LLPS-Meg-0214 | Meleagris gallopavo | 94.34 | 3e-84 | 253 |
| LLPS-Anc-1815 | Anolis carolinensis | 93.33 | 1e-82 | 250 |
| LLPS-Orc-0845 | Oryctolagus cuniculus | 89.61 | 1e-82 | 249 |
| LLPS-Aim-1744 | Ailuropoda melanoleuca | 88.96 | 5e-82 | 248 |
| LLPS-Aon-3092 | Aotus nancymaae | 88.67 | 3e-69 | 218 |
| LLPS-Xet-2489 | Xenopus tropicalis | 86.16 | 4e-85 | 256 |
| LLPS-Lac-2290 | Latimeria chalumnae | 86.16 | 2e-85 | 258 |
| LLPS-Scf-2790 | Scleropages formosus | 81.99 | 4e-79 | 241 |
| LLPS-Tar-2465 | Takifugu rubripes | 80.5 | 4e-75 | 230 |
| LLPS-Scm-1873 | Scophthalmus maximus | 79.17 | 9e-31 | 117 |
| LLPS-Dar-2748 | Danio rerio | 77.99 | 4e-78 | 238 |
| LLPS-Icp-1840 | Ictalurus punctatus | 77.36 | 1e-76 | 235 |
| LLPS-Orl-0262 | Oryzias latipes | 75.47 | 6e-74 | 230 |
| LLPS-Orn-2687 | Oreochromis niloticus | 75.47 | 1e-75 | 231 |
| LLPS-Pof-0561 | Poecilia formosa | 75.47 | 1e-73 | 227 |
| LLPS-Xim-3646 | Xiphophorus maculatus | 74.84 | 1e-73 | 227 |
| LLPS-Ten-1827 | Tetraodon nigroviridis | 74.21 | 1e-74 | 229 |
| LLPS-Asm-2359 | Astyanax mexicanus | 71.07 | 3e-74 | 229 |
| LLPS-Cis-0456 | Ciona savignyi | 67.14 | 7e-29 | 110 |
| LLPS-Mea-2180 | Mesocricetus auratus | 65.41 | 2e-43 | 149 |
| LLPS-Tut-0245 | Tursiops truncatus | 63.75 | 5e-62 | 197 |
| LLPS-Drm-0762 | Drosophila melanogaster | 56.46 | 1e-45 | 157 |
| LLPS-Leo-0161 | Lepisosteus oculatus | 56.41 | 1e-07 | 53.5 |
| LLPS-Gaa-2292 | Gasterosteus aculeatus | 51.22 | 1e-07 | 54.3 |
| LLPS-Dac-1630 | Daucus carota | 45.45 | 3e-08 | 55.8 |