LLPS-Dio-1890
Trmt10c
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | mitochondrial ribonuclease P protein 1 |
Gene Name: | Trmt10c |
Ensembl Gene: | ENSDORG00000027529.1 |
Ensembl Protein: | ENSDORP00000017723.1 |
Organism: | Dipodomys ordii |
Taxa ID: | 10020 |
LLPS Type: | Client |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Mitochondrial RNA granule | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSDORT00000032715.1 | ENSDORP00000017723.1 |
UniProt | A0A1S3FSL6, A0A1S3FSL6_DIPOR | |
RefSeq | , XM_013024104.1, XM_013024105.1 | , XP_012879558.1, XP_012879559.1, XP_012879558.1, XP_012879559.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MNVSVTCLRP FARFLVPFTL QRRKRNLYPI ILQRYMCSKI PAVPYPNKEN SSPPAQLELD 60 61 GWKTTMKSSL QEESVSTVSN KDEDSFAATR ELIEMWRLLG KEVPEHITEE ELKTVMECPS 120 121 KASKKKYLKY LSIKEKLKKA RQMKKEVKAI AREEAKKAKL LETTEEKQQN FLFLRLWDRN 180 181 MNIAMDWKGA QAMQFGQPLV FDMAYDNCMN SKEMRNTVSQ VLESEGWNRR NVDPFHIYFC 240 241 NLKIDSAYHR ELVKCYKQKW DKLLLTATEK SYADLFPKDS IVYLTADSPN VMTTFKHDKV 300 301 YVIGSLVDKN MKPGLSLAKA KQQGLATQRL PLDKYLQWDI GTKNLTLDQM IRILLCLKNT 360 361 GDWQEALRFV PKRKHSGYLE VSQYSQDFVN KLKKTKTFSS YPQNSLNVGK QKK 413 |
Nucleotide CDS Sequence (FASTA) |
1 ATGAATGTTA GTGTCACTTG CTTAAGACCT TTTGCCAGGT TTCTGGTGCC ATTTACTCTG 60 61 CAAAGGAGGA AAAGAAATTT ATATCCAATA ATTCTACAGA GATACATGTG TTCCAAAATA 120 121 CCTGCTGTGC CCTATCCTAA CAAAGAGAAT TCATCCCCTC CTGCACAGCT GGAATTAGAT 180 181 GGATGGAAAA CTACAATGAA ATCTAGTCTG CAAGAAGAAA GTGTTTCAAC AGTCTCAAAC 240 241 AAGGATGAAG ATTCTTTCGC TGCCACTAGA GAATTAATTG AGATGTGGAG ATTGCTAGGC 300 301 AAAGAAGTAC CAGAACATAT CACTGAAGAA GAGCTCAAAA CTGTTATGGA ATGTCCTTCT 360 361 AAAGCATCCA AAAAAAAATA CCTAAAATAT TTGAGTATTA AGGAAAAACT GAAAAAAGCT 420 421 AGGCAAATGA AAAAAGAAGT AAAAGCAATA GCAAGGGAAG AAGCAAAAAA AGCCAAGCTG 480 481 CTAGAAACCA CTGAGGAAAA ACAACAAAAC TTTCTATTTC TTCGACTTTG GGACAGGAAT 540 541 ATGAACATCG CAATGGACTG GAAGGGGGCC CAGGCTATGC AGTTTGGACA ACCTTTGGTT 600 601 TTTGATATGG CTTATGATAA TTGTATGAAC TCCAAAGAAA TGCGAAATAC TGTTTCTCAA 660 661 GTTTTAGAAA GTGAAGGATG GAACAGAAGA AATGTTGACC CTTTTCATAT TTATTTCTGC 720 721 AATCTTAAAA TAGATAGTGC TTACCATAGA GAGTTAGTTA AATGTTACAA ACAAAAATGG 780 781 GACAAATTAC TTTTAACAGC AACAGAAAAG TCTTATGCAG ACTTATTTCC AAAGGACAGT 840 841 ATTGTATATT TAACTGCAGA TTCTCCTAAT GTTATGACTA CTTTCAAGCA TGATAAAGTT 900 901 TATGTAATTG GATCATTAGT TGATAAAAAT ATGAAACCAG GTCTCTCCCT AGCTAAGGCA 960 961 AAACAGCAAG GACTGGCAAC ACAACGCCTT CCATTAGATA AGTATTTACA ATGGGACATA 1020 1021 GGTACCAAAA ATCTCACCTT AGATCAAATG ATACGTATTT TGTTATGTCT GAAAAACACT 1080 1081 GGTGATTGGC AAGAGGCTCT GAGGTTTGTT CCAAAAAGAA AGCATTCTGG TTATCTGGAG 1140 1141 GTTTCCCAGT ATTCTCAAGA CTTTGTAAAT AAACTGAAGA AGACTAAGAC TTTTAGTTCA 1200 1201 TATCCACAGA ACTCTTTAAA TGTAGGCAAA CAGAAAAAGT GA 1242 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Hos-1483 | Homo sapiens | 77.94 | 0.0 | 568 |
LLPS-Pat-4078 | Pan troglodytes | 77.69 | 0.0 | 564 |
LLPS-Chs-2106 | Chlorocebus sabaeus | 77.19 | 0.0 | 562 |
LLPS-Eqc-2930 | Equus caballus | 76.33 | 0.0 | 587 |
LLPS-Sus-4173 | Sus scrofa | 76.09 | 0.0 | 588 |
LLPS-Orc-2760 | Oryctolagus cuniculus | 75.49 | 0.0 | 563 |
LLPS-Ova-1509 | Ovis aries | 75.31 | 0.0 | 575 |
LLPS-Bot-4311 | Bos taurus | 73.84 | 0.0 | 570 |
LLPS-Ran-3444 | Rattus norvegicus | 73.67 | 0.0 | 562 |
LLPS-Myl-1115 | Myotis lucifugus | 73.11 | 0.0 | 543 |
LLPS-Loa-1606 | Loxodonta africana | 72.71 | 0.0 | 568 |
LLPS-Ict-3125 | Ictidomys tridecemlineatus | 72.24 | 0.0 | 562 |
LLPS-Mea-0084 | Mesocricetus auratus | 72.15 | 0.0 | 549 |
LLPS-Otg-2451 | Otolemur garnettii | 72.05 | 0.0 | 565 |
LLPS-Caf-2771 | Canis familiaris | 71.33 | 0.0 | 539 |
LLPS-Gog-2376 | Gorilla gorilla | 70.93 | 0.0 | 558 |
LLPS-Mum-3916 | Mus musculus | 70.66 | 0.0 | 566 |
LLPS-Mam-1229 | Macaca mulatta | 70.36 | 0.0 | 575 |
LLPS-Tut-2506 | Tursiops truncatus | 69.87 | 0.0 | 555 |
LLPS-Urm-3613 | Ursus maritimus | 69.46 | 0.0 | 558 |
LLPS-Poa-1920 | Pongo abelii | 69.32 | 0.0 | 574 |
LLPS-Fud-1674 | Fukomys damarensis | 69.25 | 0.0 | 545 |
LLPS-Ere-0561 | Erinaceus europaeus | 68.75 | 0.0 | 518 |
LLPS-Aim-1529 | Ailuropoda melanoleuca | 67.41 | 0.0 | 550 |
LLPS-Mup-1778 | Mustela putorius furo | 66.91 | 0.0 | 547 |
LLPS-Fec-4499 | Felis catus | 66.75 | 0.0 | 543 |
LLPS-Meg-3170 | Meleagris gallopavo | 60.59 | 6e-90 | 280 |
LLPS-Tag-3418 | Taeniopygia guttata | 56.1 | 9e-114 | 343 |
LLPS-Ora-2257 | Ornithorhynchus anatinus | 54.35 | 3e-122 | 367 |
LLPS-Mod-4067 | Monodelphis domestica | 54.2 | 2e-137 | 407 |
LLPS-Lac-2155 | Latimeria chalumnae | 54.15 | 2e-109 | 334 |
LLPS-Pes-1209 | Pelodiscus sinensis | 54.04 | 2e-129 | 386 |
LLPS-Sah-2866 | Sarcophilus harrisii | 53.94 | 2e-134 | 400 |
LLPS-Tar-3161 | Takifugu rubripes | 53.55 | 9e-78 | 251 |
LLPS-Xet-0838 | Xenopus tropicalis | 52.41 | 9e-107 | 329 |
LLPS-Fia-3832 | Ficedula albicollis | 51.53 | 6e-110 | 337 |
LLPS-Pof-3644 | Poecilia formosa | 51.32 | 2e-100 | 312 |
LLPS-Anc-2497 | Anolis carolinensis | 50.87 | 4e-119 | 361 |
LLPS-Gaga-2666 | Gallus gallus | 50.41 | 7e-108 | 331 |
LLPS-Orn-1291 | Oreochromis niloticus | 49.4 | 8e-95 | 296 |
LLPS-Anp-3330 | Anas platyrhynchos | 49.2 | 1e-108 | 332 |
LLPS-Xim-2680 | Xiphophorus maculatus | 49.16 | 1e-100 | 316 |
LLPS-Leo-2683 | Lepisosteus oculatus | 48.61 | 3e-106 | 328 |
LLPS-Icp-4084 | Ictalurus punctatus | 47.95 | 6e-100 | 313 |
LLPS-Asm-2553 | Astyanax mexicanus | 47.89 | 5e-96 | 301 |
LLPS-Orl-4049 | Oryzias latipes | 47.15 | 2e-100 | 315 |
LLPS-Gaa-2239 | Gasterosteus aculeatus | 45.88 | 1e-106 | 328 |
LLPS-Ten-2278 | Tetraodon nigroviridis | 45.21 | 2e-96 | 301 |
LLPS-Scf-2485 | Scleropages formosus | 44.19 | 3e-98 | 307 |
LLPS-Scm-3893 | Scophthalmus maximus | 42.98 | 6e-92 | 293 |
LLPS-Dar-0770 | Danio rerio | 41.85 | 4e-85 | 272 |
LLPS-Drm-2092 | Drosophila melanogaster | 40.49 | 7e-41 | 156 |
LLPS-Ast-0714 | Aspergillus terreus | 25.33 | 3e-12 | 72.8 |