• Disorder▼
  • Domain▼
  • PTM▼
  • Variation▼
  • Mutation▼
  • Interaction▼
  • Disease▼
  • Drug▼
  • Physicochemical▼
  • Function▼
  • Proteomics▼
  • Structure▼
  • Localization▼
  • Expression▼
  • Element▼
  • Methylation▼

LLPS-Dio-1605
Rara

Integrated Annotations

▼ OVERVIEW

Status: Unreviewed
Protein Name: retinoic acid receptor alpha
Gene Name: Rara
Ensembl Gene: ENSDORG00000023922.1
Ensembl Protein: ENSDORP00000021162.1
Organism: Dipodomys ordii
Taxa ID: 10020
LLPS Type: Scaffold


▼ PROPERTY


——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:
CondensateEvidenceOrthologs
Chromatin, PML nuclear bodyPredicted from orthologs(View)

▼ CROSS REFERENCE

▼ SEQUENCE

Protein Sequence (FASTA)
1     MVYTCHRDKN  CIINKVTRNR  CQYCRLQKCF  EVGMSKESVR  NDRNKKKKET  PKPECSESYT  60
61    LTPEVGELIE  KVRKAHQETF  PALCQLGKYT  TNNSSEQRVS  LDIDLWDKFS  ELSTKCIIKT  120
121   VEFAKQLPGF  TTLTIADQIT  LLKAACLDIL  ILRICTRYTP  EQDTMTFSDG  LTLNRTQMHN  180
181   AGFGPLTDLV  FAFANQLLPL  EMDDAETGLL  SAICLICGDR  QDLEQPERVD  MLQEPLLEAL  240
241   KVYVRKRRPS  RPHMFPKMLM  KITDLRSISA  KGAERVITLK  MEIPGSMPPL  IQEMLENSEG  300
301   LDTLSGQAGG  GTRDGGGLAP  PPGSCSPSLS  PSSNRSSPAT  HSP  343
Nucleotide CDS Sequence (FASTA)
1     ATGGTGTACA  CGTGTCACCG  GGACAAGAAC  TGCATCATCA  ACAAGGTGAC  CCGGAACCGC  60
61    TGCCAATACT  GCCGGCTGCA  GAAGTGCTTC  GAAGTGGGCA  TGTCCAAGGA  GTCTGTGCGG  120
121   AACGACCGGA  ACAAGAAGAA  GAAGGAGACC  CCAAAGCCCG  AGTGCTCGGA  GAGCTACACA  180
181   CTGACGCCGG  AAGTGGGGGA  GCTCATCGAG  AAGGTGCGCA  AGGCGCACCA  GGAGACCTTC  240
241   CCCGCCCTCT  GCCAGCTGGG  CAAGTACACT  ACGAACAACA  GCTCAGAACA  ACGTGTCTCT  300
301   CTGGACATTG  ACCTCTGGGA  CAAGTTCAGT  GAACTCTCCA  CCAAGTGCAT  CATTAAGACT  360
361   GTAGAGTTTG  CCAAGCAGCT  GCCCGGCTTC  ACCACCCTCA  CGATCGCTGA  CCAGATCACC  420
421   CTCCTCAAGG  CTGCCTGCCT  GGACATCCTG  ATCCTGCGGA  TCTGCACGCG  GTACACGCCT  480
481   GAGCAGGACA  CCATGACCTT  CTCAGACGGG  CTGACTCTGA  ACCGGACCCA  GATGCACAAT  540
541   GCTGGCTTCG  GTCCCCTCAC  CGACCTGGTC  TTTGCCTTCG  CCAACCAGCT  GCTGCCTCTG  600
601   GAGATGGACG  ATGCTGAGAC  CGGGCTGCTC  AGCGCCATCT  GCCTCATTTG  TGGAGATCGG  660
661   CAGGACCTAG  AACAGCCAGA  AAGGGTGGAC  ATGCTCCAAG  AACCGCTGCT  TGAGGCACTG  720
721   AAGGTGTATG  TGAGGAAACG  GAGGCCCAGC  CGCCCCCACA  TGTTCCCCAA  GATGCTGATG  780
781   AAGATCACGG  ACCTGAGAAG  CATCAGTGCT  AAGGGGGCTG  AGCGAGTGAT  CACCTTGAAG  840
841   ATGGAGATCC  CAGGCTCTAT  GCCGCCTCTT  ATCCAGGAAA  TGCTGGAGAA  CTCGGAGGGC  900
901   TTGGACACTC  TGAGCGGACA  GGCAGGGGGT  GGGACAAGGG  ACGGGGGTGG  CCTGGCCCCT  960
961   CCGCCAGGCA  GCTGTAGTCC  CAGCCTCAGT  CCCAGTTCCA  ACAGAAGCAG  CCCAGCCACC  1020
1021  CATTCCCCAT  GA  1032

▼ ORTHOLOGY

DrLLPS IDOrganismIdentityE-valueScore
LLPS-Anp-0255Anas platyrhynchos100.05e-1885.5
LLPS-Bot-1770Bos taurus99.340.0 628
LLPS-Ran-1577Rattus norvegicus99.340.0 629
LLPS-Paa-0421Papio anubis99.340.0 628
LLPS-Mal-0335Mandrillus leucophaeus99.340.0 628
LLPS-Mup-0123Mustela putorius furo99.340.0 629
LLPS-Aim-0380Ailuropoda melanoleuca99.340.0 628
LLPS-Ova-3544Ovis aries99.340.0 628
LLPS-Maf-0854Macaca fascicularis99.340.0 628
LLPS-Chs-1388Chlorocebus sabaeus99.340.0 628
LLPS-Cea-0059Cercocebus atys99.340.0 628
LLPS-Aon-2824Aotus nancymaae99.340.0 628
LLPS-Sus-0868Sus scrofa99.340.0 628
LLPS-Poa-0954Pongo abelii99.340.0 625
LLPS-Caf-4302Canis familiaris99.340.0 627
LLPS-Mam-0854Macaca mulatta99.340.0 625
LLPS-Ict-0790Ictidomys tridecemlineatus99.340.0 628
LLPS-Nol-2120Nomascus leucogenys99.340.0 627
LLPS-Hos-1524Homo sapiens99.340.0 628
LLPS-Man-3577Macaca nemestrina99.340.0 629
LLPS-Loa-0605Loxodonta africana99.340.0 628
LLPS-Orc-3953Oryctolagus cuniculus99.340.0 628
LLPS-Rhb-0915Rhinopithecus bieti99.340.0 628
LLPS-Caj-0811Callithrix jacchus99.020.0 627
LLPS-Fec-1862Felis catus99.020.0 600
LLPS-Otg-3404Otolemur garnettii99.020.0 626
LLPS-Mea-2435Mesocricetus auratus98.690.0 624
LLPS-Mum-2787Mus musculus98.690.0 626
LLPS-Eqc-0430Equus caballus98.360.0 622
LLPS-Cap-2479Cavia porcellus98.360.0 619
LLPS-Mod-2627Monodelphis domestica98.030.0 612
LLPS-Fud-3342Fukomys damarensis97.70.0 585
LLPS-Tag-1538Taeniopygia guttata96.132e-123 359
LLPS-Fia-3236Ficedula albicollis95.740.0 609
LLPS-Gaga-3881Gallus gallus95.410.0 605
LLPS-Anc-2640Anolis carolinensis95.080.0 607
LLPS-Pes-1813Pelodiscus sinensis94.56e-149 431
LLPS-Xet-3522Xenopus tropicalis91.860.0 579
LLPS-Dar-3450Danio rerio89.840.0 568
LLPS-Tar-2488Takifugu rubripes89.440.0 563
LLPS-Ten-3134Tetraodon nigroviridis89.440.0 563
LLPS-Icp-1454Ictalurus punctatus88.780.0 545
LLPS-Sah-3399Sarcophilus harrisii88.41e-155 449
LLPS-Tut-2242Tursiops truncatus86.894e-175 508
LLPS-Leo-2429Lepisosteus oculatus83.230.0 555
LLPS-Myl-3020Myotis lucifugus80.812e-151 440
LLPS-Xim-0347Xiphophorus maculatus36.312e-57 197
LLPS-Orl-2517Oryzias latipes35.692e-57 197
LLPS-Scm-0119Scophthalmus maximus35.267e-57 196
LLPS-Scf-1205Scleropages formosus34.957e-57 196
LLPS-Gaa-0014Gasterosteus aculeatus34.892e-56 195
LLPS-Orn-3710Oreochromis niloticus34.892e-56 195
LLPS-Meg-1645Meleagris gallopavo34.365e-52 184
LLPS-Pof-0241Poecilia formosa34.331e-54 191
LLPS-Gog-1076Gorilla gorilla34.053e-52 186
LLPS-Cas-3538Carlito syrichta34.053e-52 186
LLPS-Pat-0258Pan troglodytes34.053e-52 186
LLPS-Pap-2873Pan paniscus34.053e-52 186
LLPS-Lac-3807Latimeria chalumnae34.048e-56 193
LLPS-Urm-0240Ursus maritimus33.99e-47 172
LLPS-Asm-1601Astyanax mexicanus33.035e-49 177
LLPS-Ora-0587Ornithorhynchus anatinus31.451e-42 159