LLPS-Dar-4264
rnf17
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Ring finger protein 17 |
| Gene Name: | rnf17 |
| Ensembl Gene: | ENSDARG00000056387.8 |
| Ensembl Protein: | ENSDARP00000144505.1 |
| Organism: | Danio rerio |
| Taxa ID: | 7955 |
| LLPS Type: | Others |
▼ PROPERTY
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Chromatoid body | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | ENSDART00000176057.2 | ENSDARP00000144505.1 |
| Ensembl | ENSDART00000132295.4 | ENSDARP00000116232.2 |
| UniProt | F1R3C5, F1R3C5_DANRE, F1R4H5 | |
| GeneBank | BX537139 | |
| RefSeq | XM_692362.5 | XP_697454.3 |
| Entrez | 334519 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MSETAVTCKI CGSPYTLPED EAVGNLPHVL LCGHIFCCTC LRALQSQGNV ITCPECQMDT 60 61 RTSEEGVDGL EVDSRIIGLI YTARMNTKKG HSGDKWKSQK FKSPPSSAAV HTEENAEGKP 120 121 DVVKVLDEAL TKATENLNQL DKLHQTLANG VHGQLRKERS RIIREIDEAV EKAKSILLKR 180 181 RSMLVSTLSS VDLLFSGGQM ECKRIEERIK ELRTAIQKAR HVRQVPSLET YCDLEKILET 240 241 LHIPVDLESY DMSSLTLRSG LSCHLQVDGF TESVKVFLKI TDTDDNCIVE EITVEPFQHV 300 301 VKSGVEMWDN SSQSVQGKAD AIPRKSNNTR RFMEKMMEDT CPEIADTRVN AGLGRNLPVH 360 361 EPRRMERYNK GYRKQRRPQF EKPTNPQPKL VQYVVTTHIV NPGHFYVRYM AEHKLGQKLT 420 421 KKISEFCSGE RSFFTFSDEI TTGSLLFISW KDDMWCRVKV TELFQKECFQ SVTKCLASEV 480 481 SRLCVYFLDY GFFKGFSIPS DGGLSGLNEC LRRPDGITLI EMANWAPLAI KCSLKDIIPA 540 541 DLVKGWSSEA SEEMRNVLRN ETAEMQVFGE DGDALLVDLK KTSMADLKKN SMVSLREHLV 600 601 FMELARFYCP VITTGSAPLL FYPSVQPSLN VEVNAMVSHV NTPSDFYVQL VENTEYPLLH 660 661 SKLQDCYNQP KSNNECQVYC PSLSQACVAF HDQEWSRVQV TGFPGGRMVE VRFVDFGYKR 720 721 TLSVKDLRHI KDEFFVLPEM ALWCNLNDVI SSQETWANEA CESFKELVEG KLMTVVAKKN 780 781 VPSSKPVPVC LFEISDDCTG ASIGDELVKK GYAVYNKDTQ VRDAQPLETT SWDPPFEEEA 840 841 LPVVMTPSSA SEELKPSLSL PSCLKDIRVR VTHVTSPGNI CVQLLQFDNQ LKRIHDTLKN 900 901 LFSKSEPQEM QWEAEMYCAV NNTGVWERGQ VCSVSTCGVA EVLRCDFGNT VKLHVDNLRP 960 961 LHPDLIGSFL LECNLSGVRP AGGRSTWTAT ACDFISHYLT GAMALMAIKE PSTRPVLVSL 1020 1021 FCSNRAGQNV SFADFLISEG LALKERKAEM VFSEESVLVT EPQPVISPTQ TPPTPSRRIN 1080 1081 PPPERVKTHS YPPPELPPCG HILMSISAVS EQGVIYAMTH QAVCEFDRLR ERLQQHIKTL 1140 1141 PRQKNYNWKG VLGCAVMGTD MFWYRGQVQE VIGGHVKVRY VDQGLVESIP VCHVYPMVLC 1200 1201 EDVPQLCVPC QINGVLPIGK GWQWDAVVLM KELLLGRSVN VQIMEHPKDP CGCVTVEIMV 1260 1261 DGMALSKIMV HHQYATFDPA ISSQEDYVVK PPMPDLDDWD LNTEGLEEQP PVLGVYKELH 1320 1321 IPKERKHFPA KVKHIRTPNE VFLCVLDKSL CKLEQDESME ETLEQVNENI ENLSLLTDFP 1380 1381 IECLCLAEYS DGKYYRAKIL GFSEVTPSVK LLVRHVDFGS DDIIPLHKLR QLPASLHHFP 1440 1441 CAAVYVKLAG FKPTNVSSDL ERIPYSLDWT MKAMMEMIDL LNGELTAVVT ATKPQLTVLL 1500 1501 YNADGTLVHT PLVEKGLADY E 1521 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGTCGGAGA CAGCGGTAAC GTGTAAAATC TGTGGCTCAC CGTACACTTT ACCAGAAGAT 60 61 GAAGCTGTGG GGAATCTGCC GCACGTGCTG TTGTGTGGGC ATATCTTCTG CTGCACGTGC 120 121 CTGCGCGCGC TCCAGTCCCA GGGCAACGTC ATTACCTGTC CAGAATGTCA GATGGACACC 180 181 AGAACTAGCG AGGAAGGAGT TGATGGTTTA GAGGTGGACA GCAGAATCAT TGGCCTCATC 240 241 TATACAGCAC GCATGAACAC AAAGAAAGGG CACTCAGGAG ACAAGTGGAA GTCCCAAAAG 300 301 TTTAAGAGCC CACCCTCATC TGCAGCTGTC CACACTGAGG AGAATGCAGA AGGGAAGCCA 360 361 GATGTAGTGA AAGTTTTGGA TGAAGCTCTT ACGAAGGCAA CAGAAAATCT TAACCAACTT 420 421 GATAAACTTC ACCAGACTCT TGCCAATGGT GTTCATGGTC AGCTGAGGAA AGAGAGATCT 480 481 CGAATCATCA GAGAGATTGA TGAGGCCGTT GAAAAAGCAA AGAGCATTCT GCTAAAAAGG 540 541 CGGTCTATGT TGGTGTCAAC ATTGAGCTCT GTGGATCTTC TCTTCTCGGG CGGGCAGATG 600 601 GAGTGTAAGA GAATAGAAGA GAGAATAAAG GAGCTGCGCA CAGCCATTCA GAAAGCACGA 660 661 CATGTGCGTC AGGTTCCTTC TCTTGAGACC TACTGCGACC TAGAAAAGAT TTTGGAGACG 720 721 TTGCACATTC CAGTAGATCT TGAGTCATAC GACATGAGCT CTCTGACGCT GCGTTCAGGA 780 781 CTCAGCTGCC ATCTTCAGGT GGATGGTTTT ACTGAAAGTG TGAAAGTCTT TTTAAAAATC 840 841 ACAGATACCG ATGATAACTG TATTGTAGAG GAAATTACAG TGGAGCCTTT TCAACATGTT 900 901 GTGAAGAGCG GTGTTGAGAT GTGGGACAAT TCCAGTCAAT CTGTTCAGGG AAAGGCAGAT 960 961 GCCATTCCCA GAAAGTCAAA TAACACACGC AGGTTCATGG AAAAAATGAT GGAAGACACT 1020 1021 TGTCCAGAGA TAGCGGACAC ACGTGTGAAT GCAGGGCTTG GACGCAATTT GCCAGTTCAT 1080 1081 GAACCAAGGC GCATGGAACG GTACAACAAA GGCTATAGAA AACAACGCAG ACCACAGTTT 1140 1141 GAAAAACCCA CAAATCCACA GCCTAAATTG GTGCAGTATG TTGTGACAAC CCACATTGTA 1200 1201 AACCCAGGAC ATTTCTATGT GCGTTATATG GCAGAACACA AGTTAGGCCA AAAGTTAACC 1260 1261 AAAAAGATTA GTGAGTTCTG CTCTGGGGAA CGTAGCTTCT TCACTTTCAG TGATGAAATC 1320 1321 ACGACAGGCT CTCTGCTGTT TATCAGTTGG AAGGATGATA TGTGGTGTAG GGTAAAAGTG 1380 1381 ACCGAGCTCT TCCAGAAAGA GTGTTTCCAG AGTGTGACCA AATGTCTAGC TTCAGAAGTT 1440 1441 TCTCGTCTGT GCGTTTACTT CTTGGACTAT GGCTTCTTTA AGGGCTTCTC TATCCCAAGT 1500 1501 GATGGAGGTT TAAGTGGGCT TAATGAGTGT CTACGGAGGC CTGATGGAAT TACTCTCATT 1560 1561 GAAATGGCTA ACTGGGCTCC TCTCGCAATC AAATGTTCCC TTAAAGATAT CATTCCTGCA 1620 1621 GACCTGGTGA AAGGGTGGAG TTCAGAAGCA AGCGAGGAGA TGAGGAATGT GCTGCGCAAT 1680 1681 GAGACTGCAG AGATGCAGGT GTTCGGTGAG GACGGAGATG CACTGTTAGT GGATCTCAAG 1740 1741 AAAACCTCAA TGGCGGATCT AAAAAAAAAC TCAATGGTGT CTCTGCGTGA GCACCTAGTG 1800 1801 TTCATGGAGC TGGCCAGATT CTACTGTCCG GTGATAACCA CTGGCAGTGC ACCTCTGCTC 1860 1861 TTCTACCCTT CAGTTCAGCC CTCACTCAAT GTAGAGGTCA ATGCTATGGT TTCTCATGTT 1920 1921 AACACACCAT CAGATTTCTA TGTACAACTA GTTGAAAATA CAGAGTACCC GCTGTTGCAC 1980 1981 TCGAAGCTTC AGGACTGTTA CAACCAGCCC AAGTCAAACA ACGAGTGCCA GGTCTACTGC 2040 2041 CCTTCTCTCT CACAGGCCTG CGTCGCTTTC CATGACCAAG AATGGTCCAG GGTTCAGGTC 2100 2101 ACAGGGTTCC CTGGTGGCCG AATGGTGGAG GTTCGGTTTG TGGACTTTGG CTACAAAAGA 2160 2161 ACTCTCTCTG TGAAAGATCT GAGACATATA AAGGATGAGT TCTTTGTTCT GCCAGAAATG 2220 2221 GCTTTGTGGT GCAACCTGAA CGATGTGATC AGTTCTCAGG AAACATGGGC TAATGAAGCC 2280 2281 TGTGAAAGCT TTAAAGAACT CGTGGAGGGC AAACTTATGA CTGTTGTGGC TAAAAAGAAT 2340 2341 GTACCGAGCT CCAAACCAGT GCCTGTGTGT CTGTTTGAGA TCAGCGACGA TTGTACTGGA 2400 2401 GCTAGTATTG GAGATGAACT GGTCAAAAAG GGTTATGCAG TTTACAATAA AGACACCCAG 2460 2461 GTCAGAGATG CCCAGCCCTT GGAGACGACC TCGTGGGACC CTCCATTTGA GGAGGAAGCA 2520 2521 CTGCCTGTTG TGATGACTCC TTCTTCTGCT TCTGAAGAGC TAAAGCCCAG CCTGAGTCTG 2580 2581 CCAAGCTGTC TCAAAGACAT CAGAGTTCGT GTGACACACG TCACTTCCCC TGGAAACATC 2640 2641 TGTGTGCAGC TGCTGCAGTT CGACAACCAG CTGAAGAGAA TCCACGACAC ACTGAAGAAT 2700 2701 CTCTTCTCCA AGTCTGAGCC ACAGGAGATG CAATGGGAAG CCGAGATGTA TTGTGCTGTC 2760 2761 AACAACACTG GGGTTTGGGA AAGAGGACAA GTGTGTAGTG TGTCTACTTG TGGTGTTGCA 2820 2821 GAGGTTTTGC GCTGTGACTT TGGTAATACA GTCAAACTCC ATGTAGACAA CCTCAGACCC 2880 2881 CTCCATCCTG ATCTGATTGG ATCTTTCTTG CTGGAATGTA ACCTCAGTGG TGTGAGGCCT 2940 2941 GCTGGTGGTC GCTCCACATG GACCGCCACA GCATGTGACT TCATCTCTCA CTACTTGACC 3000 3001 GGAGCCATGG CTTTAATGGC TATAAAGGAG CCTTCCACCA GACCAGTGTT AGTTTCTTTG 3060 3061 TTTTGCTCTA ATCGTGCTGG TCAAAATGTC AGTTTTGCAG ATTTCCTCAT CAGTGAAGGA 3120 3121 CTTGCTCTGA AGGAAAGAAA GGCTGAGATG GTCTTTTCAG AAGAAAGTGT TTTGGTTACG 3180 3181 GAGCCACAGC CAGTCATAAG CCCAACACAG ACTCCACCCA CACCCAGCCG CCGCATCAAC 3240 3241 CCACCACCAG AGAGGGTGAA GACCCACTCG TACCCTCCTC CAGAGCTGCC GCCCTGTGGA 3300 3301 CACATTCTTA TGAGTATCTC TGCCGTCTCA GAACAAGGTG TCATTTATGC AATGACGCAT 3360 3361 CAAGCAGTTT GTGAATTTGA TCGGTTACGA GAGCGTCTGC AACAGCACAT TAAAACCCTC 3420 3421 CCGAGACAGA AGAACTACAA CTGGAAAGGA GTTTTGGGCT GTGCTGTTAT GGGAACAGAC 3480 3481 ATGTTCTGGT ACAGAGGTCA GGTGCAGGAG GTTATTGGAG GACATGTGAA GGTTCGATAT 3540 3541 GTGGATCAGG GACTGGTAGA GAGTATTCCC GTTTGTCACG TGTACCCGAT GGTTCTCTGC 3600 3601 GAGGATGTGC CACAGCTCTG TGTGCCTTGT CAGATAAATG GAGTCTTACC GATTGGCAAA 3660 3661 GGATGGCAGT GGGATGCAGT GGTGCTCATG AAGGAGTTGC TACTTGGACG TTCAGTCAAT 3720 3721 GTCCAAATTA TGGAACACCC AAAGGATCCA TGTGGCTGTG TTACGGTGGA GATAATGGTG 3780 3781 GATGGCATGG CACTTAGCAA GATAATGGTT CACCATCAAT ATGCCACGTT TGACCCTGCC 3840 3841 ATCAGCAGCC AGGAGGATTA TGTGGTTAAG CCTCCTATGC CAGATTTGGA TGACTGGGAT 3900 3901 CTAAACACAG AGGGGTTGGA GGAGCAACCG CCTGTCCTAG GGGTATATAA AGAGCTTCAT 3960 3961 ATTCCTAAAG AAAGAAAACA TTTTCCTGCC AAGGTCAAGC ATATCCGCAC GCCAAATGAG 4020 4021 GTGTTCCTGT GTGTCCTGGA CAAGAGTCTG TGCAAACTGG AGCAGGATGA GAGTATGGAG 4080 4081 GAAACTCTTG AACAAGTGAA TGAGAATATT GAAAATCTGA GCCTGCTGAC AGACTTCCCC 4140 4141 ATTGAGTGTC TCTGTCTGGC CGAGTACAGT GATGGTAAAT ATTATCGTGC GAAAATTCTG 4200 4201 GGATTTTCTG AAGTCACTCC CTCTGTCAAG CTACTTGTGA GACATGTTGA TTTTGGCTCG 4260 4261 GATGACATCA TACCATTGCA CAAATTGCGA CAACTCCCTG CATCCCTTCA CCATTTCCCA 4320 4321 TGTGCAGCTG TTTACGTCAA GTTGGCAGGC TTCAAACCAA CAAACGTGTC CTCGGATTTG 4380 4381 GAGCGGATTC CTTATTCCCT CGATTGGACT ATGAAAGCCA TGATGGAGAT GATCGACTTG 4440 4441 TTGAACGGAG AGCTCACTGC GGTGGTCACT GCAACCAAAC CACAACTGAC TGTGCTGCTG 4500 4501 TACAATGCGG ATGGGACACT TGTCCACACA CCTCTGGTGG AGAAAGGTCT TGCTGATTAT 4560 4561 GAGTAA 4566 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Icp-3655 | Ictalurus punctatus | 63.66 | 0.0 | 1437 |
| LLPS-Asm-2361 | Astyanax mexicanus | 59.84 | 0.0 | 1290 |
| LLPS-Scm-2582 | Scophthalmus maximus | 46.37 | 0.0 | 942 |
| LLPS-Gaa-3632 | Gasterosteus aculeatus | 45.85 | 2e-125 | 408 |
| LLPS-Scf-3845 | Scleropages formosus | 45.31 | 0.0 | 937 |
| LLPS-Orn-2608 | Oreochromis niloticus | 43.8 | 0.0 | 1269 |
| LLPS-Ten-2320 | Tetraodon nigroviridis | 43.25 | 0.0 | 911 |
| LLPS-Xim-3583 | Xiphophorus maculatus | 42.55 | 0.0 | 1036 |
| LLPS-Pof-1674 | Poecilia formosa | 42.24 | 0.0 | 1180 |
| LLPS-Orl-4087 | Oryzias latipes | 41.2 | 0.0 | 1010 |
| LLPS-Leo-3575 | Lepisosteus oculatus | 40.03 | 0.0 | 1033 |
| LLPS-Tar-1124 | Takifugu rubripes | 38.6 | 0.0 | 1036 |
| LLPS-Gaga-3219 | Gallus gallus | 37.02 | 4e-34 | 144 |
| LLPS-Ora-1278 | Ornithorhynchus anatinus | 36.79 | 9e-13 | 72.4 |
| LLPS-Pes-3077 | Pelodiscus sinensis | 34.92 | 0.0 | 673 |
| LLPS-Aon-1449 | Aotus nancymaae | 34.83 | 1e-20 | 103 |
| LLPS-Pap-0287 | Pan paniscus | 34.65 | 0.0 | 647 |
| LLPS-Mum-2632 | Mus musculus | 34.41 | 0.0 | 644 |
| LLPS-Paa-4270 | Papio anubis | 34.24 | 0.0 | 652 |
| LLPS-Cea-3235 | Cercocebus atys | 34.24 | 0.0 | 653 |
| LLPS-Mal-1641 | Mandrillus leucophaeus | 34.16 | 0.0 | 651 |
| LLPS-Maf-1291 | Macaca fascicularis | 34.15 | 0.0 | 650 |
| LLPS-Chs-0655 | Chlorocebus sabaeus | 34.15 | 0.0 | 640 |
| LLPS-Mam-4521 | Macaca mulatta | 34.15 | 0.0 | 651 |
| LLPS-Man-4847 | Macaca nemestrina | 34.15 | 0.0 | 650 |
| LLPS-Sus-0348 | Sus scrofa | 33.83 | 0.0 | 632 |
| LLPS-Mea-1957 | Mesocricetus auratus | 33.71 | 0.0 | 624 |
| LLPS-Bot-4305 | Bos taurus | 33.63 | 3e-105 | 355 |
| LLPS-Urm-2591 | Ursus maritimus | 33.63 | 3e-101 | 343 |
| LLPS-Anc-2065 | Anolis carolinensis | 33.56 | 2e-11 | 73.6 |
| LLPS-Ova-0607 | Ovis aries | 33.33 | 0.0 | 630 |
| LLPS-Cas-3058 | Carlito syrichta | 33.2 | 0.0 | 615 |
| LLPS-Mod-0383 | Monodelphis domestica | 33.1 | 3e-08 | 63.5 |
| LLPS-Tag-0650 | Taeniopygia guttata | 32.7 | 5e-101 | 344 |
| LLPS-Fia-3819 | Ficedula albicollis | 32.53 | 0.0 | 598 |
| LLPS-Lac-3254 | Latimeria chalumnae | 32.51 | 4e-167 | 541 |
| LLPS-Ran-3461 | Rattus norvegicus | 31.83 | 0.0 | 677 |
| LLPS-Sah-4062 | Sarcophilus harrisii | 31.58 | 0.0 | 728 |
| LLPS-Ict-2326 | Ictidomys tridecemlineatus | 31.58 | 3e-87 | 303 |
| LLPS-Eqc-4101 | Equus caballus | 31.47 | 2e-07 | 60.5 |
| LLPS-Anp-3202 | Anas platyrhynchos | 31.47 | 2e-180 | 585 |
| LLPS-Mup-4309 | Mustela putorius furo | 31.38 | 0.0 | 683 |
| LLPS-Gog-2447 | Gorilla gorilla | 31.38 | 0.0 | 684 |
| LLPS-Poa-3377 | Pongo abelii | 31.32 | 0.0 | 691 |
| LLPS-Hos-3389 | Homo sapiens | 31.32 | 0.0 | 686 |
| LLPS-Pat-4599 | Pan troglodytes | 31.31 | 0.0 | 690 |
| LLPS-Nol-3770 | Nomascus leucogenys | 31.27 | 0.0 | 677 |
| LLPS-Otg-3092 | Otolemur garnettii | 31.19 | 0.0 | 687 |
| LLPS-Myl-1937 | Myotis lucifugus | 31.06 | 0.0 | 689 |
| LLPS-Orc-0224 | Oryctolagus cuniculus | 30.93 | 0.0 | 699 |
| LLPS-Caf-1964 | Canis familiaris | 30.85 | 0.0 | 671 |
| LLPS-Meg-2711 | Meleagris gallopavo | 30.77 | 4e-173 | 561 |
| LLPS-Aim-1233 | Ailuropoda melanoleuca | 30.73 | 0.0 | 676 |
| LLPS-Fec-3603 | Felis catus | 30.56 | 0.0 | 696 |
| LLPS-Fud-2546 | Fukomys damarensis | 30.42 | 0.0 | 651 |
| LLPS-Caj-0522 | Callithrix jacchus | 30.37 | 0.0 | 665 |
| LLPS-Rhb-2259 | Rhinopithecus bieti | 30.31 | 0.0 | 645 |
| LLPS-Xet-1800 | Xenopus tropicalis | 30.09 | 8e-138 | 462 |
| LLPS-Cap-0188 | Cavia porcellus | 29.86 | 1e-07 | 61.2 |
| LLPS-Loa-1532 | Loxodonta africana | 29.57 | 1e-06 | 57.4 |
| LLPS-Dio-1210 | Dipodomys ordii | 28.88 | 5e-08 | 61.6 |
| LLPS-Pug-0450 | Puccinia graminis | 24.65 | 2e-07 | 60.5 |