LLPS-Dar-3576
pdlim4

▼ OVERVIEW


Status: Unreviewed
Protein Name: PDZ and LIM domain 4
Gene Name: pdlim4
Ensembl Gene: ENSDARG00000068973.5
Ensembl Protein: ENSDARP00000090750.4
Organism: Danio rerio
Taxa ID: 7955
LLPS Type: Others


▼ PROPERTY



——— Disorder propensity (calculated by IUPred2A)

▼ Classification


Condensates:
CondensateEvidenceOrthologs
Nucleolus, Stress granulePredicted from orthologs(View)

▼ CROSS REFERENCE


▼ SEQUENCE


Protein Sequence (FASTA)
1     MSHTVTLSGP  SPWGFRLVGG  RDFSTPLTIS  RITPASKAAQ  SNLSPGDTIL  AINGESTESM  60
61    THMEAQNRIK  ACTDQLVLAI  CRSGKAWSPT  GMEELKTSPF  SPTLESDSQT  FRPISSGYSP  120
121   TPKSPSPKSP  ITGAVPYNNG  GSRPVYNNPA  GLYSHNNGNG  ALPKQMSGLS  LGSPHSFSPE  180
181   PPVNSSGNRN  GFDTQSDVYR  MLLDYEEPVS  APKQSGSFKY  LQGILEAEDG  GVSPVDRSGV  240
241   RGLRSPVKSP  VPKLGSPITA  PLAPIPGLQN  LPQCTRCANG  IVGVIVKARD  KLYHPDCFMC  300
301   DDCGLNLKQR  GYFFIDDNLY  CETHAKARVQ  PPEGYDVVAV  YPNSKVELV  349
Nucleotide CDS Sequence (FASTA)
1     ATGTCTCACA  CTGTGACTCT  CAGCGGTCCC  TCGCCCTGGG  GTTTTCGGCT  GGTGGGTGGA  60
61    CGAGACTTCA  GCACACCGCT  CACCATTTCC  AGAATAACAC  CTGCGAGCAA  AGCGGCGCAG  120
121   AGCAACCTGA  GTCCTGGAGA  CACCATCCTG  GCCATCAATG  GAGAAAGCAC  AGAGAGCATG  180
181   ACGCACATGG  AGGCTCAGAA  CCGCATTAAA  GCCTGCACAG  ATCAGCTGGT  GCTGGCCATC  240
241   TGCAGATCTG  GCAAGGCTTG  GTCTCCAACT  GGAATGGAAG  AACTCAAGAC  AAGTCCATTC  300
301   AGCCCAACAC  TGGAGTCTGA  TTCACAGACT  TTCCGACCAA  TCAGCAGTGG  CTACAGTCCA  360
361   ACTCCCAAAA  GTCCGTCGCC  CAAGAGCCCA  ATCACTGGTG  CTGTGCCTTA  CAACAATGGT  420
421   GGATCCAGAC  CAGTGTACAA  CAACCCAGCA  GGACTTTATT  CCCACAACAA  CGGCAACGGT  480
481   GCCCTGCCGA  AGCAGATGTC  AGGCCTCAGC  CTGGGCTCTC  CTCACAGTTT  TAGCCCTGAG  540
541   CCGCCAGTGA  ATTCATCAGG  CAACCGCAAC  GGTTTCGACA  CACAGTCTGA  CGTCTACAGG  600
601   ATGCTCCTGG  ACTATGAGGA  ACCGGTTTCA  GCTCCCAAAC  AATCCGGCTC  CTTTAAATAC  660
661   CTGCAGGGAA  TCCTGGAAGC  TGAGGATGGG  GGAGTCTCGC  CGGTGGACAG  ATCTGGGGTC  720
721   AGAGGCTTGC  GTTCCCCTGT  TAAATCACCC  GTGCCGAAGC  TGGGCAGCCC  TATTACAGCC  780
781   CCTCTGGCAC  CCATTCCTGG  CCTACAGAAC  CTTCCTCAGT  GCACACGCTG  CGCAAACGGC  840
841   ATTGTGGGAG  TCATCGTGAA  GGCCCGAGAC  AAGCTCTACC  ACCCCGACTG  CTTCATGTGT  900
901   GACGACTGCG  GCCTCAACCT  GAAGCAGAGA  GGATATTTCT  TCATCGATGA  CAATCTGTAT  960
961   TGTGAGACCC  ACGCCAAGGC  CCGCGTCCAG  CCTCCTGAGG  GCTACGACGT  AGTGGCCGTT  1020
1021  TATCCCAACT  CTAAAGTGGA  ACTGGTCTAA  1050

▼ ANNOTATION


Disorder
D2P2IUPred2A
Interaction
RAINMIST
Physicochemical
AAindex

▼ ORTHOLOGY


DrLLPS IDOrganismIdentityE-valueScore
LLPS-Scf-2474Scleropages formosus72.245e-168 479
LLPS-Leo-0152Lepisosteus oculatus69.66e-166 474
LLPS-Pof-0376Poecilia formosa67.917e-164 470
LLPS-Xim-1481Xiphophorus maculatus66.844e-162 465
LLPS-Tar-0427Takifugu rubripes66.675e-163 468
LLPS-Scm-3301Scophthalmus maximus66.145e-161 463
LLPS-Gaa-2633Gasterosteus aculeatus64.258e-142 414
LLPS-Ten-0640Tetraodon nigroviridis64.049e-152 438
LLPS-Orl-1196Oryzias latipes63.713e-145 421
LLPS-Fia-3505Ficedula albicollis61.953e-40 151
LLPS-Asm-3908Astyanax mexicanus61.251e-23 106
LLPS-Meg-0440Meleagris gallopavo60.985e-26 111
LLPS-Tag-1438Taeniopygia guttata60.761e-24 107
LLPS-Lac-1109Latimeria chalumnae60.05e-24 105
LLPS-Icp-2876Ictalurus punctatus59.761e-24 108
LLPS-Anc-2530Anolis carolinensis59.551e-129 381
LLPS-Orn-0678Oreochromis niloticus59.268e-33 130
LLPS-Sah-2629Sarcophilus harrisii58.291e-123 367
LLPS-Xet-2294Xenopus tropicalis58.241e-125 372
LLPS-Pes-3593Pelodiscus sinensis57.681e-115 344
LLPS-Mod-1219Monodelphis domestica57.144e-121 361
LLPS-Gog-1601Gorilla gorilla56.11e-23 105
LLPS-Fud-4129Fukomys damarensis56.12e-23 103
LLPS-Gaga-1246Gallus gallus55.682e-124 368
LLPS-Mea-1934Mesocricetus auratus55.566e-23 102
LLPS-Otg-3205Otolemur garnettii54.883e-23 103
LLPS-Rhb-4027Rhinopithecus bieti54.884e-23 103
LLPS-Hos-2252Homo sapiens54.883e-23 103
LLPS-Pat-0474Pan troglodytes54.883e-23 103
LLPS-Pap-3350Pan paniscus54.884e-23 103
LLPS-Man-0308Macaca nemestrina54.883e-23 103
LLPS-Ict-2638Ictidomys tridecemlineatus54.882e-23 103
LLPS-Poa-2679Pongo abelii54.882e-23 103
LLPS-Mam-2137Macaca mulatta54.884e-23 103
LLPS-Caj-4495Callithrix jacchus54.884e-23 103
LLPS-Maf-1209Macaca fascicularis54.883e-23 103
LLPS-Mum-0821Mus musculus54.888e-23 102
LLPS-Chs-2271Chlorocebus sabaeus54.883e-23 103
LLPS-Aon-3433Aotus nancymaae54.884e-23 103
LLPS-Mal-3814Mandrillus leucophaeus54.883e-23 103
LLPS-Aim-1646Ailuropoda melanoleuca54.328e-22 100
LLPS-Anp-2854Anas platyrhynchos54.244e-117 349
LLPS-Sus-2231Sus scrofa54.112e-113 340
LLPS-Loa-2005Loxodonta africana54.084e-103 313
LLPS-Nol-3598Nomascus leucogenys54.061e-105 320
LLPS-Ran-0848Rattus norvegicus54.022e-23 103
LLPS-Ova-0041Ovis aries53.662e-22 102
LLPS-Caf-1489Canis familiaris53.222e-108 327
LLPS-Fec-2889Felis catus53.093e-106 322
LLPS-Eqc-2634Equus caballus52.879e-23 102
LLPS-Cea-0369Cercocebus atys52.712e-105 320
LLPS-Paa-2184Papio anubis52.712e-105 319
LLPS-Bot-1920Bos taurus52.715e-104 316
LLPS-Mup-0695Mustela putorius furo52.21e-109 330
LLPS-Myl-2390Myotis lucifugus51.991e-107 325
LLPS-Tut-1939Tursiops truncatus51.855e-2095.1
LLPS-Urm-3018Ursus maritimus51.693e-2094.0
LLPS-Ere-0823Erinaceus europaeus51.692e-2196.7
LLPS-Dio-3256Dipodomys ordii48.524e-82 259
LLPS-Orc-3220Oryctolagus cuniculus47.677e-1989.7
LLPS-Cap-4370Cavia porcellus45.875e-87 271
LLPS-Cas-2137Carlito syrichta44.385e-73 235
LLPS-Ora-2175Ornithorhynchus anatinus37.462e-61 206