LLPS-Dar-2865
prpf4

▼ OVERVIEW

Status: Unreviewed
Protein Name: PRP4 pre-mRNA-processing factor 4 homolog (yeast)
Gene Name: prpf4
Ensembl Gene: ENSDARG00000067639.4
Ensembl Protein: ENSDARP00000088166.3
Organism: Danio rerio
Taxa ID: 7955
LLPS Type: Others


▼ PROPERTY


——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:
CondensateEvidenceOrthologs
Nuclear speckle, NucleolusPredicted from orthologs(View)

▼ CROSS REFERENCE

▼ SEQUENCE

Protein Sequence (FASTA)
1     MSDEDEAPVV  KRSRIFYGSL  EEKEKERLSR  EGTSTTAKDA  VKAGIEAGHI  NISSGESMEM  60
61    EERVSERQAE  VLAEFERRKR  ARQITVSTDD  VEVKACLRAL  GEPITLFGEG  PAERRERLRN  120
121   VLSVLGPDAL  KKSKKEDEKA  KRTHEEYQQT  WYHEGPTSLK  EARLWLAKYS  LPRAVKRLDA  180
181   ARAQKEIPES  TRTIKQQELH  KNLRNVNNFC  SQIGDDRPIS  YCQFSPNSKL  LVTASWSGLC  240
241   KLWKVPDCTL  IRTLRGHNTN  VGAISFHPQA  TLTLEESDVN  MASCAADGSV  KLWSLDSDEP  300
301   IADIEGHSMR  VARVTWHPSG  RFLGTTCYDH  SWRLWDLEVQ  EEILHQEGHS  KGVHDLHFHP  360
361   DGSLAGTGGL  DSFARVWDLR  TGRCVMFLEG  HIKEIYSINF  SPNGFHVATG  SGDNACKVWD  420
421   LRQRRCIYTI  PAHQNLVSSV  KFQPNDGHYL  LTGAYDNTAK  IWTHPGWSPL  KTLAGHEGKV  480
481   MGVDLSPDGQ  LIATCSYDRT  FKLWMSE  507
Nucleotide CDS Sequence (FASTA)
1     ATGTCAGATG  AAGATGAAGC  TCCAGTTGTG  AAAAGGTCCA  GGATCTTCTA  TGGAAGCCTT  60
61    GAGGAAAAGG  AGAAGGAGCG  TCTCAGCCGT  GAAGGGACAT  CCACCACTGC  CAAAGATGCC  120
121   GTTAAAGCTG  GCATTGAGGC  TGGACATATT  AATATCTCCA  GTGGTGAGTC  CATGGAGATG  180
181   GAGGAGCGTG  TGAGCGAGAG  ACAGGCTGAA  GTGCTGGCAG  AGTTTGAGCG  CAGGAAGAGA  240
241   GCCAGACAGA  TCACCGTCTC  TACTGATGAT  GTAGAGGTGA  AGGCCTGCCT  TCGTGCACTT  300
301   GGAGAACCAA  TCACATTGTT  CGGGGAGGGG  CCTGCAGAGA  GACGAGAGAG  ATTGAGAAAC  360
361   GTTCTTTCAG  TACTTGGTCC  TGATGCCTTA  AAGAAATCCA  AGAAAGAGGA  TGAAAAAGCA  420
421   AAACGCACTC  ATGAAGAGTA  TCAACAGACA  TGGTACCATG  AAGGACCTAC  ATCTCTGAAG  480
481   GAAGCGCGTT  TGTGGTTAGC  CAAGTATTCA  CTGCCTAGAG  CTGTGAAACG  TTTAGACGCA  540
541   GCAAGAGCCC  AAAAAGAAAT  TCCAGAATCT  ACACGAACAA  TTAAACAGCA  AGAGCTTCAC  600
601   AAGAACTTGC  GGAATGTAAA  TAACTTCTGC  AGCCAGATCG  GAGACGACCG  TCCAATATCT  660
661   TACTGCCAGT  TTAGCCCCAA  CTCAAAGCTG  CTTGTGACGG  CATCATGGTC  GGGCTTGTGT  720
721   AAATTGTGGA  AGGTCCCCGA  TTGTACTCTT  ATACGCACAT  TAAGAGGTCA  CAATACCAAT  780
781   GTGGGAGCGA  TTAGCTTTCA  CCCACAAGCC  ACACTAACAC  TTGAGGAGTC  AGATGTCAAT  840
841   ATGGCCTCTT  GTGCTGCAGA  TGGATCTGTT  AAGCTGTGGA  GTTTAGACAG  TGATGAACCT  900
901   ATAGCAGACA  TTGAGGGACA  CTCTATGAGG  GTGGCTCGGG  TGACCTGGCA  TCCCTCTGGC  960
961   CGGTTTCTGG  GCACAACTTG  CTATGATCAC  TCATGGCGAC  TTTGGGATCT  TGAGGTCCAA  1020
1021  GAAGAAATTC  TTCATCAGGA  GGGTCACAGT  AAAGGCGTCC  ATGATCTGCA  CTTCCACCCA  1080
1081  GATGGCTCTT  TGGCAGGAAC  TGGTGGTTTG  GATTCATTTG  CACGTGTCTG  GGACCTGCGC  1140
1141  ACTGGTCGCT  GTGTCATGTT  CCTAGAGGGC  CACATCAAAG  AGATTTACAG  CATCAACTTT  1200
1201  TCCCCAAACG  GCTTTCATGT  GGCAACGGGA  AGTGGAGATA  ATGCCTGTAA  AGTGTGGGAC  1260
1261  CTTCGCCAGA  GACGGTGCAT  ATACACAATC  CCAGCCCATC  AGAACCTTGT  GTCCTCTGTC  1320
1321  AAGTTCCAAC  CTAATGATGG  GCATTATTTG  CTGACTGGTG  CGTATGACAA  CACGGCTAAA  1380
1381  ATCTGGACTC  ATCCTGGCTG  GTCCCCGCTG  AAGACCCTGG  CAGGACATGA  GGGGAAGGTG  1440
1441  ATGGGGGTTG  ACCTTTCACC  TGACGGACAG  CTCATCGCAA  CCTGTTCTTA  TGACCGAACC  1500
1501  TTTAAACTCT  GGATGTCAGA  ATGA  1524

▼ ANNOTATION

Disorder
D2P2IUPred2A
Interaction
RAINMIST
Physicochemical
AAindex

▼ ORTHOLOGY

DrLLPS IDOrganismIdentityE-valueScore
LLPS-Scf-1671Scleropages formosus88.950.0 878
LLPS-Icp-1224Ictalurus punctatus87.180.0 873
LLPS-Leo-0302Lepisosteus oculatus85.40.0 858
LLPS-Chs-1126Chlorocebus sabaeus81.980.0 604
LLPS-Tar-3570Takifugu rubripes81.030.0 791
LLPS-Ten-1456Tetraodon nigroviridis80.790.0 785
LLPS-Tag-0131Taeniopygia guttata80.630.0 788
LLPS-Orn-1988Oreochromis niloticus80.20.0 796
LLPS-Ora-0039Ornithorhynchus anatinus80.050.0 669
LLPS-Pap-1968Pan paniscus80.00.0 791
LLPS-Pat-0413Pan troglodytes80.00.0 791
LLPS-Hos-2040Homo sapiens80.00.0 793
LLPS-Bot-0362Bos taurus80.00.0 793
LLPS-Gog-1719Gorilla gorilla80.00.0 792
LLPS-Fud-2547Fukomys damarensis80.00.0 793
LLPS-Gaga-0071Gallus gallus79.840.0 805
LLPS-Nol-0150Nomascus leucogenys79.80.0 792
LLPS-Caf-2935Canis familiaris79.80.0 794
LLPS-Mam-0007Macaca mulatta79.80.0 791
LLPS-Rhb-1553Rhinopithecus bieti79.80.0 791
LLPS-Scm-3026Scophthalmus maximus79.80.0 784
LLPS-Fec-1778Felis catus79.80.0 793
LLPS-Loa-4120Loxodonta africana79.80.0 791
LLPS-Mal-0527Mandrillus leucophaeus79.80.0 791
LLPS-Myl-0373Myotis lucifugus79.80.0 791
LLPS-Mup-2368Mustela putorius furo79.80.0 793
LLPS-Aim-0122Ailuropoda melanoleuca79.80.0 793
LLPS-Caj-2648Callithrix jacchus79.80.0 793
LLPS-Mea-1281Mesocricetus auratus79.80.0 790
LLPS-Mum-0081Mus musculus79.80.0 792
LLPS-Cea-1565Cercocebus atys79.80.0 791
LLPS-Aon-1827Aotus nancymaae79.80.0 791
LLPS-Sus-1617Sus scrofa79.80.0 793
LLPS-Cas-1492Carlito syrichta79.60.0 791
LLPS-Ict-4158Ictidomys tridecemlineatus79.60.0 791
LLPS-Orc-1120Oryctolagus cuniculus79.60.0 791
LLPS-Ran-2254Rattus norvegicus79.60.0 790
LLPS-Paa-1894Papio anubis79.60.0 787
LLPS-Ova-3448Ovis aries79.60.0 790
LLPS-Maf-3866Macaca fascicularis79.60.0 788
LLPS-Cap-0794Cavia porcellus79.410.0 788
LLPS-Dio-1626Dipodomys ordii79.410.0 790
LLPS-Sah-3023Sarcophilus harrisii79.410.0 788
LLPS-Urm-3767Ursus maritimus79.210.0 781
LLPS-Mod-1072Monodelphis domestica79.210.0 786
LLPS-Pes-3065Pelodiscus sinensis78.70.0 797
LLPS-Eqc-2377Equus caballus78.680.0 671
LLPS-Anc-1827Anolis carolinensis78.540.0 796
LLPS-Meg-2283Meleagris gallopavo78.260.0 800
LLPS-Orl-1457Oryzias latipes78.150.0 777
LLPS-Fia-2987Ficedula albicollis77.830.0 678
LLPS-Otg-1760Otolemur garnettii76.040.0 742
LLPS-Gaa-1774Gasterosteus aculeatus72.940.0 698
LLPS-Man-1708Macaca nemestrina71.490.0 655
LLPS-Poa-3139Pongo abelii70.690.0 684
LLPS-Asm-2119Astyanax mexicanus68.450.0 624
LLPS-Xim-0109Xiphophorus maculatus65.950.0 537
LLPS-Cii-1321Ciona intestinalis60.630.0 608
LLPS-Cis-0170Ciona savignyi59.170.0 620
LLPS-Drm-1695Drosophila melanogaster58.941e-172 506
LLPS-Cae-1131Caenorhabditis elegans47.485e-144 430
LLPS-Xet-0937Xenopus tropicalis47.163e-112 347
LLPS-Vir-2115Vigna radiata44.573e-130 399
LLPS-Dac-1588Daucus carota44.273e-130 398
LLPS-Sei-2106Setaria italica44.244e-127 388
LLPS-Coc-1754Corchorus capsularis44.23e-131 400
LLPS-Gor-1040Gossypium raimondii44.127e-119 368
LLPS-Via-1400Vigna angularis44.122e-129 395
LLPS-Phv-2605Phaseolus vulgaris43.971e-129 396
LLPS-Brd-1546Brachypodium distachyon43.963e-128 390
LLPS-Cus-2124Cucumis sativus43.782e-129 395
LLPS-Tra-1645Triticum aestivum43.762e-125 383
LLPS-Mae-0257Manihot esculenta43.653e-129 395
LLPS-Sem-0380Selaginella moellendorffii43.628e-131 397
LLPS-Prp-0598Prunus persica43.582e-133 404
LLPS-Sob-1435Sorghum bicolor43.573e-127 388
LLPS-Lep-1364Leersia perrieri43.566e-125 379
LLPS-Glm-1971Glycine max43.532e-128 393
LLPS-Pot-1898Populus trichocarpa43.432e-127 390
LLPS-Asni-0457Aspergillus niger43.432e-123 377
LLPS-Hov-1217Hordeum vulgare43.412e-122 375
LLPS-Tru-0604Triticum urartu43.341e-104 327
LLPS-Orbr-0586Oryza brachyantha43.336e-124 377
LLPS-Php-2080Physcomitrella patens43.242e-130 397
LLPS-Viv-0575Vitis vinifera43.212e-129 398
LLPS-Amt-1259Amborella trichopoda43.151e-119 368
LLPS-Orr-2335Oryza rufipogon42.991e-119 365
LLPS-Arl-2847Arabidopsis lyrata42.955e-121 373
LLPS-Met-2231Medicago truncatula42.893e-111 347
LLPS-Nia-1989Nicotiana attenuata42.861e-0552.4
LLPS-Orgl-1347Oryza glumaepatula42.867e-123 377
LLPS-Sot-2109Solanum tuberosum42.865e-130 397
LLPS-Thc-0716Theobroma cacao42.862e-129 395
LLPS-Sol-0570Solanum lycopersicum42.861e-129 396
LLPS-Bro-1256Brassica oleracea42.834e-122 378
LLPS-Art-2150Arabidopsis thaliana42.839e-123 378
LLPS-Orm-0918Oryza meridionalis42.633e-121 372
LLPS-Ors-1965Oryza sativa42.633e-121 372
LLPS-Orni-0654Oryza nivara42.631e-121 373
LLPS-Spr-0481Sporisorium reilianum42.618e-128 389
LLPS-Brr-0654Brassica rapa42.68e-123 377
LLPS-Mua-0648Musa acuminata42.55e-118 362
LLPS-Orp-0615Oryza punctata42.45e-121 372
LLPS-Chr-1063Chlamydomonas reinhardtii42.342e-101 318
LLPS-Usm-0939Ustilago maydis42.253e-129 393
LLPS-Zem-2473Zea mays41.453e-121 374
LLPS-Mel-1389Melampsora laricipopulina41.416e-123 375
LLPS-Asf-0523Aspergillus flavus41.162e-120 370
LLPS-Aso-0895Aspergillus oryzae41.161e-120 370
LLPS-Tum-1435Tuber melanosporum41.066e-121 372
LLPS-Map-0787Magnaporthe poae40.88e-58 199
LLPS-Crn-0728Cryptococcus neoformans40.581e-125 384
LLPS-Asn-1055Aspergillus nidulans40.511e-118 366
LLPS-Ast-0665Aspergillus terreus40.57e-119 367
LLPS-Blg-1198Blumeria graminis40.484e-118 364
LLPS-Miv-0082Microbotryum violaceum40.42e-127 389
LLPS-Asc-1069Aspergillus clavatus40.125e-117 362
LLPS-Asfu-0963Aspergillus fumigatus40.02e-113 353
LLPS-Nef-0284Neosartorya fischeri40.06e-119 367
LLPS-Zyt-1098Zymoseptoria tritici39.71e-107 338
LLPS-Gas-0912Galdieria sulphuraria39.685e-113 351
LLPS-Cogr-0679Colletotrichum graminicola39.441e-106 335
LLPS-Ved-0120Verticillium dahliae39.261e-107 337
LLPS-Cog-1365Colletotrichum gloeosporioides39.223e-104 338
LLPS-Pytr-1024Pyrenophora triticirepentis39.091e-95 306
LLPS-Coo-1011Colletotrichum orbiculare39.053e-105 338
LLPS-Beb-1042Beauveria bassiana38.972e-104 329
LLPS-Trr-0927Trichoderma reesei38.926e-101 320
LLPS-Dos-1380Dothistroma septosporum38.93e-104 329
LLPS-Fus-1088Fusarium solani38.761e-103 327
LLPS-Scs-0537Sclerotinia sclerotiorum38.614e-114 354
LLPS-Fuv-1125Fusarium verticillioides38.466e-103 325
LLPS-Pyt-0989Pyrenophora teres38.441e-95 306
LLPS-Gag-0469Gaeumannomyces graminis38.431e-103 327
LLPS-Abg-0918Absidia glauca38.332e-93 298
LLPS-Fuo-1377Fusarium oxysporum38.033e-102 323
LLPS-Trv-1091Trichoderma virens37.552e-99 316
LLPS-Nec-0944Neurospora crassa37.475e-104 328
LLPS-Mao-0389Magnaporthe oryzae37.291e-97 311
LLPS-Pug-0874Puccinia graminis37.081e-118 367
LLPS-Yal-0840Yarrowia lipolytica36.281e-85 278
LLPS-Scj-1317Schizosaccharomyces japonicus36.163e-89 288
LLPS-Put-0498Puccinia triticina36.076e-98 314
LLPS-Scp-1349Schizosaccharomyces pombe35.994e-92 295
LLPS-Pof-1583Poecilia formosa35.448e-0652.4
LLPS-Osl-0433Ostreococcus lucimarinus35.417e-86 279
LLPS-Brn-2134Brassica napus34.673e-81 267
LLPS-Sac-1013Saccharomyces cerevisiae34.376e-77 256
LLPS-Kop-0746Komagataella pastoris33.244e-69 234
LLPS-Chc-0385Chondrus crispus32.736e-59 207
LLPS-Asg-0754Ashbya gossypii31.325e-62 216
LLPS-Lac-2087Latimeria chalumnae30.043e-33 133