LLPS-Dar-1795
ptcd2

▼ OVERVIEW

Status: Unreviewed
Protein Name: Pentatricopeptide repeat-containing protein 2, mitochondrial
Gene Name: ptcd2, zgc:112401
Ensembl Gene: ENSDARG00000035391.7
Ensembl Protein: ENSDARP00000097803.1
Organism: Danio rerio
Taxa ID: 7955
LLPS Type: Client


▼ PROPERTY


——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:
CondensateEvidenceOrthologs
Mitochondrial RNA granulePredicted from orthologs(View)

▼ FUNCTION

Involved in mitochondrial RNA maturation and mitochondrial respiratory chain function.

▼ CROSS REFERENCE

▼ SEQUENCE

Protein Sequence (FASTA)
1     MALQALNIWT  RVILTDASRA  AVFRGSLQSH  CFKCRHGAKR  FLLSEDVVKL  QEFQQKKLSH  60
61    EMSQLKDYRF  DIVNQKLEKN  EIILKTELKT  LLHSCQSAED  VIVARNVIKR  YHENNRTTVF  120
121   GEFKFGPLFM  RLCYELGLEE  LAATTIKDPA  LKGFFSDTTS  FNITIDMLFN  KQLYESGLEV  180
181   VGEMKKQGVS  LSRDTFMLVF  AICYKLNTSR  SYHICLTLLE  EGQTKGNIIP  RRAYCFAIAL  240
241   ALKQNDLERA  QIFYSHIMST  GTRLCQNLRV  FILAVKGSMK  EAVYVLKTAR  ISETPVLVRK  300
301   PEFSREVVNV  LRRKSAGSVW  EERVEQVLTQ  LEKAGQITEM  TLDDLLCYTP  SRKRRLLELP  360
361   QKDRQIKQRT  RKSLQSGLLL  E  381
Nucleotide CDS Sequence (FASTA)
1     ATGGCGCTGC  AGGCACTAAA  CATTTGGACT  CGTGTTATTC  TGACCGACGC  GTCCAGAGCA  60
61    GCGGTGTTTC  GGGGATCCCT  GCAGTCACAC  TGTTTCAAGT  GTCGACATGG  AGCCAAGCGC  120
121   TTTCTCTTAT  CTGAAGATGT  GGTGAAGCTG  CAGGAGTTCC  AGCAGAAGAA  ACTCTCCCAT  180
181   GAAATGTCAC  AATTGAAAGA  TTATCGTTTT  GATATAGTGA  ATCAGAAACT  GGAGAAAAAT  240
241   GAGATCATTT  TAAAGACTGA  GCTGAAAACT  CTACTGCATT  CATGCCAGTC  TGCTGAGGAT  300
301   GTTATTGTGG  CCAGAAATGT  CATTAAAAGA  TACCATGAAA  ATAATCGAAC  CACAGTGTTT  360
361   GGGGAATTCA  AGTTTGGTCC  TCTTTTCATG  AGATTATGCT  ATGAACTGGG  TTTAGAGGAG  420
421   CTGGCAGCCA  CAACTATAAA  AGATCCGGCT  CTCAAAGGAT  TTTTTTCAGA  CACCACTTCT  480
481   TTTAATATCA  CCATTGACAT  GCTGTTTAAT  AAACAACTCT  ATGAAAGTGG  CTTGGAGGTG  540
541   GTTGGAGAAA  TGAAAAAACA  AGGAGTGTCG  CTCAGCAGAG  ACACCTTCAT  GCTTGTCTTC  600
601   GCTATTTGTT  ATAAACTGAA  CACCTCAAGG  TCATATCATA  TATGTTTGAC  CCTGTTGGAA  660
661   GAAGGTCAGA  CAAAAGGCAA  CATCATCCCT  CGACGTGCCT  ATTGCTTTGC  AATTGCTCTT  720
721   GCTTTAAAAC  AGAATGATCT  AGAAAGAGCC  CAGATCTTCT  ATTCTCACAT  CATGAGCACA  780
781   GGGACTCGGC  TATGCCAGAA  CCTGAGGGTT  TTCATATTGG  CTGTAAAAGG  GTCCATGAAA  840
841   GAGGCAGTTT  ATGTCCTCAA  AACAGCCAGA  ATATCAGAGA  CTCCAGTGCT  GGTGAGGAAA  900
901   CCAGAGTTTT  CTCGAGAAGT  GGTAAATGTA  TTAAGAAGAA  AGAGTGCTGG  TAGTGTTTGG  960
961   GAGGAGAGGG  TAGAACAGGT  GCTGACACAG  TTAGAAAAGG  CCGGTCAGAT  CACGGAGATG  1020
1021  ACACTTGATG  ATTTGCTGTG  TTACACTCCA  TCAAGGAAGA  GGAGACTTCT  GGAGCTACCA  1080
1081  CAGAAAGACA  GACAAATCAA  ACAAAGGACT  CGTAAATCTC  TTCAGTCTGG  ACTGCTGTTA  1140
1141  GAATGA  1146

▼ KEYWORD

ID
Family
Complete proteome
Mitochondrion
mRNA processing
Reference proteome

▼ GENE ONTOLOGY

ID
Classification
Description
Cellular Component
Mitochondrion
Biological Process
MRNA processing
Biological Process
Regulation of mRNA processing

▼ KEGG


▼ ANNOTATION

Disorder
D2P2IUPred2A
Interaction
RAINMIST
Physicochemical
AAindex

▼ ORTHOLOGY

DrLLPS IDOrganismIdentityE-valueScore
LLPS-Mea-2230Mesocricetus auratus55.04e-60 203
LLPS-Icp-1301Ictalurus punctatus54.273e-129 383
LLPS-Ten-2423Tetraodon nigroviridis54.153e-131 389
LLPS-Tar-2521Takifugu rubripes53.522e-132 391
LLPS-Asm-1177Astyanax mexicanus53.132e-130 386
LLPS-Pof-2310Poecilia formosa52.781e-117 352
LLPS-Orn-4066Oreochromis niloticus52.741e-117 352
LLPS-Gaa-0301Gasterosteus aculeatus52.332e-129 384
LLPS-Pes-0780Pelodiscus sinensis51.781e-106 323
LLPS-Orl-1802Oryzias latipes51.522e-121 364
LLPS-Xim-2951Xiphophorus maculatus51.347e-120 361
LLPS-Leo-0038Lepisosteus oculatus51.171e-127 379
LLPS-Loa-1248Loxodonta africana50.917e-89 277
LLPS-Scf-1420Scleropages formosus50.571e-116 351
LLPS-Scm-1595Scophthalmus maximus50.533e-121 363
LLPS-Lac-3206Latimeria chalumnae49.572e-112 342
LLPS-Anc-1163Anolis carolinensis48.345e-115 347
LLPS-Ran-3893Rattus norvegicus47.192e-99 307
LLPS-Tag-3595Taeniopygia guttata46.971e-96 299
LLPS-Mod-2518Monodelphis domestica46.935e-104 319
LLPS-Dio-0132Dipodomys ordii46.563e-99 307
LLPS-Gaga-2976Gallus gallus46.331e-94 295
LLPS-Fec-2588Felis catus46.134e-83 266
LLPS-Anp-2617Anas platyrhynchos46.061e-91 286
LLPS-Fia-0719Ficedula albicollis45.851e-88 278
LLPS-Mum-3725Mus musculus45.799e-95 295
LLPS-Meg-2610Meleagris gallopavo45.696e-94 292
LLPS-Tut-1005Tursiops truncatus45.682e-97 302
LLPS-Orc-4164Oryctolagus cuniculus45.634e-100 309
LLPS-Mup-4301Mustela putorius furo45.588e-99 305
LLPS-Fud-3561Fukomys damarensis45.488e-96 298
LLPS-Myl-3364Myotis lucifugus45.451e-94 295
LLPS-Aon-4496Aotus nancymaae45.431e-93 292
LLPS-Aim-4343Ailuropoda melanoleuca45.314e-97 301
LLPS-Pat-0231Pan troglodytes45.289e-94 293
LLPS-Urm-3725Ursus maritimus45.043e-95 296
LLPS-Caf-3998Canis familiaris45.044e-97 303
LLPS-Eqc-0537Equus caballus44.851e-97 303
LLPS-Chs-0516Chlorocebus sabaeus44.764e-94 293
LLPS-Nol-2946Nomascus leucogenys44.765e-95 296
LLPS-Otg-3376Otolemur garnettii44.721e-97 303
LLPS-Sus-4291Sus scrofa44.579e-94 294
LLPS-Caj-3823Callithrix jacchus44.531e-93 293
LLPS-Maf-0727Macaca fascicularis44.57e-96 298
LLPS-Mal-3925Mandrillus leucophaeus44.54e-95 296
LLPS-Man-3366Macaca nemestrina44.54e-95 296
LLPS-Cap-4645Cavia porcellus44.383e-96 299
LLPS-Bot-0927Bos taurus44.36e-96 298
LLPS-Xet-2992Xenopus tropicalis44.32e-101 312
LLPS-Ict-0983Ictidomys tridecemlineatus44.272e-97 302
LLPS-Cea-3995Cercocebus atys44.244e-94 293
LLPS-Gog-2117Gorilla gorilla44.123e-93 291
LLPS-Hos-1101Homo sapiens44.127e-93 290
LLPS-Pap-4503Pan paniscus44.122e-93 292
LLPS-Ova-3124Ovis aries43.882e-93 292
LLPS-Ora-2330Ornithorhynchus anatinus43.388e-49 170
LLPS-Ere-0992Erinaceus europaeus42.784e-96 299
LLPS-Sah-1534Sarcophilus harrisii42.151e-94 295
LLPS-Rhb-3049Rhinopithecus bieti40.052e-75 244
LLPS-Poa-3722Pongo abelii39.532e-73 239
LLPS-Mam-1415Macaca mulatta38.942e-36 139
LLPS-Cas-1251Carlito syrichta38.212e-37 140