DrLLPS - Data resource of LLPS

LLPS-Dar-0914
rbm34

▼ OVERVIEW


Status:	Unreviewed
Protein Name:	RNA-binding motif protein 34
Gene Name:	rbm34
Ensembl Gene:	ENSDARG00000101877.4
Ensembl Protein:	ENSDARP00000137265.1
Organism:	Danio rerio
Taxa ID:	7955
LLPS Type:	LLPS regulator

▼ PROPERTY

——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:

Condensate	Evidence	Orthologs
Nucleolus, P-body, Others	Predicted from orthologs	(View)

Organism	DrLLPS ID	UniProt ID	LLPS type	Condensate	Identity	E-value	Score
Caenorhabditis elegans	LLPS-Cae-0272	Q95QL3	Regulator	P-body	34.98	1e-32	131
Homo sapiens	LLPS-Hos-0174	P42696	Client	Nucleolus	59.71	6e-74	244
Arabidopsis thaliana	LLPS-Art-0158	Q9LUK6	Client	Nucleolus	39.49	6e-29	122
Saccharomyces cerevisiae	LLPS-Sac-0232	Q08208	Client	Nucleolus, Others	46.89	3e-76	246
Mus musculus	LLPS-Mum-1013	Q8C5L7	Client	Nucleolus	58.82	4e-66	224
Bos taurus	LLPS-Bot-0017	A8NJ74	Client	Nucleolus	53.75	5e-72	239

▼ CROSS REFERENCE

Database	Nucleotide ID	Protein ID
Ensembl	ENSDART00000159068.2	ENSDARP00000137265.1
Ensembl	ENSDART00000159618.3	ENSDARP00000133124.1
Ensembl	ENSDART00000158887.3	ENSDARP00000136398.1
Ensembl	ENSDART00000166323.2	ENSDARP00000135152.1
Ensembl	ENSDART00000187753.1	ENSDARP00000149035.1
UniProt		Q6DHU2, Q6DHU2_DANRE
GeneBank	BX569779, BC075875	, AAH75875.1
RefSeq	NM_001002382.1	NP_001002382.1
Entrez	436655

▼ SEQUENCE

Protein Sequence (FASTA)
1 MKKEIKKSSD GGDAGGYKVG QVSGSLFPEK HKSSALSSLF ASTSSANTLV FLPPPKIEPK 60 61 VTPAVSDNAV VKSKDQVQKQ KKKPKTLSAA EKKLQDRESA LQNADEEGQA SAKKVKRKRA 120 121 DGGEDEEERP TKHKKTVKFN AEERLKMKRT VFVGNLPSSC KKKDLLSVFK KSGVIESVRF 180 181 RSVIREDPTM SRKVAAIQRK VHPKKQNINA YIVFKEEESA TDALKWNGHE IQAGFYIRVD 240 241 RVSQHSKHDH KRSIFVGNLP YDISELPLQN HFQECGNIEA VRLVRDRDSG MGKGFGYVLF 300 301 ESPDSVMLAL KLNGSTLQQR KIRVKRSVKK EKEKKTPPGR KAEGQRTGGG LKGPKQEFRN 360 361 NTGRKNFTKN PRNKPTQASS FKGEMADPTA KRGKPQKKKF KHKKKKHSGH V 411
Nucleotide CDS Sequence (FASTA)
1 ATGAAGAAGG AGATTAAAAA GAGTGATGGT GGCGATGCTG GAGGATATAA AGTCGGTCAG 60 61 GTGTCCGGCA GCCTCTTCCC AGAAAAACAC AAATCCTCAG CTCTGTCTTC ATTATTCGCC 120 121 TCCACTTCAT CTGCAAATAC TTTAGTGTTC CTTCCTCCAC CAAAAATTGA GCCTAAAGTC 180 181 ACGCCTGCAG TGTCTGATAA TGCAGTAGTC AAGAGCAAAG ATCAGGTTCA GAAACAGAAG 240 241 AAAAAACCAA AGACTCTTTC AGCTGCTGAG AAGAAACTCC AGGACAGGGA AAGCGCTCTA 300 301 CAGAACGCTG ATGAAGAAGG ACAAGCGAGT GCAAAGAAAG TCAAACGTAA ACGTGCAGAC 360 361 GGAGGAGAAG ACGAAGAAGA GCGACCCACC AAACACAAGA AAACCGTCAA GTTCAATGCG 420 421 GAGGAACGGC TCAAAATGAA ACGAACGGTG TTTGTGGGAA ATCTCCCGTC CAGCTGCAAG 480 481 AAGAAGGATC TTCTGTCCGT GTTCAAGAAG TCTGGAGTCA TCGAATCGGT TCGCTTTCGT 540 541 TCAGTGATTC GGGAAGATCC AACTATGTCC CGCAAAGTGG CTGCCATCCA GAGAAAAGTA 600 601 CATCCCAAGA AACAAAATAT TAATGCTTAC ATCGTCTTCA AAGAGGAAGA ATCAGCCACT 660 661 GATGCTCTCA AATGGAATGG CCATGAGATT CAGGCAGGTT TCTACATACG AGTGGACCGA 720 721 GTTTCTCAGC ACAGCAAACA TGATCATAAA CGCTCCATAT TTGTGGGGAA TTTACCGTAC 780 781 GATATAAGTG AGCTTCCGCT GCAGAATCAC TTCCAGGAGT GTGGAAACAT CGAGGCCGTG 840 841 CGTTTGGTGC GAGACAGGGA TTCTGGCATG GGGAAAGGCT TCGGCTATGT CCTTT 895

▼ ANNOTATION

Disorder
IUPred2A

Domain
SMART	CDD	Gene3D

Interaction
MIST

Physicochemical
AAindex

▼ ORTHOLOGY

DrLLPS ID	Organism	Identity	E-value	Score
LLPS-Tag-0222	Taeniopygia guttata	61.76	1e-61	204
LLPS-Fia-0959	Ficedula albicollis	59.41	4e-56	189
LLPS-Scf-1775	Scleropages formosus	56.96	3e-97	304
LLPS-Gog-0390	Gorilla gorilla	56.49	7e-76	249
LLPS-Pat-1324	Pan troglodytes	56.49	1e-75	248
LLPS-Hos-0174	Homo sapiens	56.49	6e-76	249
LLPS-Anp-0232	Anas platyrhynchos	56.3	3e-77	248
LLPS-Myl-1295	Myotis lucifugus	55.33	8e-71	236
LLPS-Maf-0532	Macaca fascicularis	55.23	6e-74	244
LLPS-Paa-1530	Papio anubis	55.23	4e-74	244
LLPS-Man-1639	Macaca nemestrina	55.23	6e-74	244
LLPS-Rhb-2165	Rhinopithecus bieti	55.23	5e-74	244
LLPS-Mam-1239	Macaca mulatta	55.23	3e-74	244
LLPS-Chs-1058	Chlorocebus sabaeus	54.81	2e-73	243
LLPS-Cea-1477	Cercocebus atys	54.81	8e-73	241
LLPS-Caj-0195	Callithrix jacchus	54.81	1e-71	238
LLPS-Icp-2256	Ictalurus punctatus	54.61	5e-107	330
LLPS-Ora-0199	Ornithorhynchus anatinus	54.39	1e-65	222
LLPS-Orc-2677	Oryctolagus cuniculus	54.22	2e-70	234
LLPS-Meg-0397	Meleagris gallopavo	54.04	3e-73	240
LLPS-Aon-0498	Aotus nancymaae	53.97	2e-71	238
LLPS-Cas-0041	Carlito syrichta	53.91	7e-74	243
LLPS-Leo-0444	Lepisosteus oculatus	53.67	5e-93	294
LLPS-Ict-3249	Ictidomys tridecemlineatus	53.5	7e-70	233
LLPS-Urm-0729	Ursus maritimus	53.31	8e-72	238
LLPS-Mal-1674	Mandrillus leucophaeus	53.22	2e-67	226
LLPS-Loa-0871	Loxodonta africana	53.2	1e-70	235
LLPS-Dio-0137	Dipodomys ordii	53.02	1e-69	228
LLPS-Otg-0789	Otolemur garnettii	52.52	2e-62	213
LLPS-Ran-0196	Rattus norvegicus	51.63	3e-68	229
LLPS-Pof-0414	Poecilia formosa	50.51	1e-96	302
LLPS-Xim-0398	Xiphophorus maculatus	50.26	9e-92	290
LLPS-Asm-1387	Astyanax mexicanus	50.25	1e-102	318
LLPS-Mum-1013	Mus musculus	50.2	1e-63	217
LLPS-Tar-1598	Takifugu rubripes	50.16	9e-89	281
LLPS-Dos-1237	Dothistroma septosporum	50.0	3e-11	68.9
LLPS-Orn-0623	Oreochromis niloticus	49.49	9e-97	303
LLPS-Lac-1903	Latimeria chalumnae	48.76	4e-82	265
LLPS-Poa-1505	Pongo abelii	48.62	6e-74	244
LLPS-Scm-1686	Scophthalmus maximus	48.45	2e-92	292
LLPS-Nol-0734	Nomascus leucogenys	47.71	3e-72	239
LLPS-Xet-0058	Xenopus tropicalis	47.27	2e-73	242
LLPS-Gaa-1729	Gasterosteus aculeatus	47.1	7e-93	293
LLPS-Cap-0570	Cavia porcellus	46.5	4e-68	228
LLPS-Scc-1495	Schizosaccharomyces cryophilus	46.38	5e-10	64.7
LLPS-Fuv-0221	Fusarium verticillioides	46.27	5e-11	65.9
LLPS-Scs-1098	Sclerotinia sclerotiorum	46.27	4e-10	62.8
LLPS-Blg-0733	Blumeria graminis	46.27	4e-10	63.2
LLPS-Trr-1118	Trichoderma reesei	46.27	1e-10	64.3
LLPS-Fus-1443	Fusarium solani	46.27	1e-10	64.3
LLPS-Trv-1568	Trichoderma virens	46.27	1e-10	64.3
LLPS-Fuo-0582	Fusarium oxysporum	46.27	6e-11	65.9
LLPS-Bot-0017	Bos taurus	46.22	7e-73	241
LLPS-Aim-0225	Ailuropoda melanoleuca	46.22	3e-72	239
LLPS-Pap-0305	Pan paniscus	45.73	9e-68	227
LLPS-Anc-0612	Anolis carolinensis	45.37	6e-74	243
LLPS-Ten-0837	Tetraodon nigroviridis	45.36	3e-78	253
LLPS-Fec-1083	Felis catus	45.32	7e-72	238
LLPS-Sei-0003	Setaria italica	45.03	2e-32	131
LLPS-Brd-0180	Brachypodium distachyon	44.44	2e-31	129
LLPS-Sob-0755	Sorghum bicolor	44.44	8e-32	129
LLPS-Gaga-0265	Gallus gallus	44.39	1e-31	127
LLPS-Mup-1189	Mustela putorius furo	43.95	2e-69	232
LLPS-Sah-0108	Sarcophilus harrisii	43.86	4e-68	229
LLPS-Yal-0778	Yarrowia lipolytica	43.84	1e-10	66.6
LLPS-Zem-1098	Zea mays	43.79	9e-32	129
LLPS-Caf-0035	Canis familiaris	43.77	1e-63	216
LLPS-Ova-1826	Ovis aries	43.73	6e-62	212
LLPS-Phv-0081	Phaseolus vulgaris	43.65	1e-27	118
LLPS-Coc-0160	Corchorus capsularis	43.65	7e-28	120
LLPS-Sol-0160	Solanum lycopersicum	43.53	1e-25	113
LLPS-Sot-0848	Solanum tuberosum	43.53	7e-26	113
LLPS-Gas-0110	Galdieria sulphuraria	43.42	3e-12	69.3
LLPS-Orb-0785	Oryza barthii	43.27	3e-31	128
LLPS-Ori-0038	Oryza indica	43.27	4e-31	127
LLPS-Orni-1033	Oryza nivara	43.27	4e-31	127
LLPS-Orgl-0251	Oryza glumaepatula	43.27	1e-30	127
LLPS-Ors-1555	Oryza sativa	43.27	4e-31	127
LLPS-Orr-0744	Oryza rufipogon	43.27	4e-31	127
LLPS-Orm-0381	Oryza meridionalis	43.27	3e-31	127
LLPS-Org-0063	Oryza glaberrima	43.27	3e-31	128
LLPS-Glm-1186	Glycine max	43.09	2e-27	117
LLPS-Thc-1099	Theobroma cacao	43.09	3e-29	122
LLPS-Vir-1342	Vigna radiata	43.09	4e-27	117
LLPS-Orl-1260	Oryzias latipes	43.07	2e-86	276
LLPS-Dac-0577	Daucus carota	42.94	2e-25	112
LLPS-Viv-0480	Vitis vinifera	42.86	5e-26	113
LLPS-Hea-0601	Helianthus annuus	42.71	4e-27	116
LLPS-Orp-0466	Oryza punctata	42.69	7e-31	127
LLPS-Orbr-0514	Oryza brachyantha	42.69	2e-30	125
LLPS-Gor-0626	Gossypium raimondii	42.54	3e-32	131
LLPS-Eqc-2979	Equus caballus	42.51	4e-58	201
LLPS-Pes-0839	Pelodiscus sinensis	42.47	1e-66	224
LLPS-Osl-0125	Ostreococcus lucimarinus	42.27	2e-13	73.6
LLPS-Mao-1319	Magnaporthe oryzae	42.22	2e-12	70.1
LLPS-Lep-1030	Leersia perrieri	42.11	4e-30	125
LLPS-Cus-0289	Cucumis sativus	42.05	8e-26	113
LLPS-Abg-0693	Absidia glauca	41.81	4e-29	121
LLPS-Scj-0150	Schizosaccharomyces japonicus	41.81	9e-34	135
LLPS-Asn-0871	Aspergillus nidulans	41.67	9e-11	64.7
LLPS-Tra-1622	Triticum aestivum	41.53	3e-31	128
LLPS-Tru-0363	Triticum urartu	41.53	4e-31	127
LLPS-Prp-0814	Prunus persica	41.44	9e-31	127
LLPS-Pot-1447	Populus trichocarpa	41.34	4e-31	128
LLPS-Sac-1201	Saccharomyces cerevisiae	41.27	3e-10	65.1
LLPS-Scp-0443	Schizosaccharomyces pombe	41.18	2e-10	63.5
LLPS-Hov-0046	Hordeum vulgare	40.67	8e-33	133
LLPS-Cae-0272	Caenorhabditis elegans	40.61	2e-30	125
LLPS-Nia-1280	Nicotiana attenuata	40.59	2e-30	126
LLPS-Art-0158	Arabidopsis thaliana	40.56	7e-27	115
LLPS-Tum-0191	Tuber melanosporum	40.41	2e-32	132
LLPS-Mae-0230	Manihot esculenta	40.28	7e-32	129
LLPS-Arl-0263	Arabidopsis lyrata	40.0	3e-26	114
LLPS-Mod-0675	Monodelphis domestica	40.0	3e-64	218
LLPS-Cog-1321	Colletotrichum gloeosporioides	40.0	3e-11	67.0
LLPS-Brn-1092	Brassica napus	39.78	3e-25	110
LLPS-Brr-0006	Brassica rapa	39.78	2e-25	109
LLPS-Ved-1530	Verticillium dahliae	39.77	3e-12	69.3
LLPS-Asg-0668	Ashbya gossypii	39.42	3e-34	136
LLPS-Gag-0018	Gaeumannomyces graminis	39.33	2e-11	66.6
LLPS-Map-1001	Magnaporthe poae	39.33	4e-11	65.9
LLPS-Aso-1056	Aspergillus oryzae	39.33	4e-11	65.9
LLPS-Bro-0137	Brassica oleracea	39.23	9e-25	109
LLPS-Php-0235	Physcomitrella patens	38.64	4e-28	120
LLPS-Mua-0740	Musa acuminata	38.63	2e-29	125
LLPS-Met-0192	Medicago truncatula	38.6	2e-29	123
LLPS-Zyt-0535	Zymoseptoria tritici	38.24	9e-13	70.9
LLPS-Asc-1002	Aspergillus clavatus	38.2	8e-11	65.1
LLPS-Nec-1041	Neurospora crassa	38.2	7e-11	65.5
LLPS-Nef-1412	Neosartorya fischeri	38.2	8e-11	65.1
LLPS-Asfu-1627	Aspergillus fumigatus	38.2	1e-10	65.1
LLPS-Drm-0369	Drosophila melanogaster	37.99	1e-25	111
LLPS-Asni-1159	Aspergillus niger	37.08	1e-10	64.7
LLPS-Amt-0648	Amborella trichopoda	36.48	2e-26	115
LLPS-Kop-0849	Komagataella pastoris	35.59	5e-21	98.6
LLPS-Chr-0162	Chlamydomonas reinhardtii	35.14	1e-20	98.6
LLPS-Beb-0109	Beauveria bassiana	34.93	1e-20	98.2
LLPS-Phn-0747	Phaeosphaeria nodorum	34.29	2e-20	97.1
LLPS-Coo-1147	Colletotrichum orbiculare	33.33	7e-12	68.2
LLPS-Pyt-0189	Pyrenophora teres	32.86	2e-20	97.4
LLPS-Pytr-0314	Pyrenophora triticirepentis	32.86	1e-20	97.8
LLPS-Cym-0519	Cyanidioschyzon merolae	32.84	6e-30	124
LLPS-Ast-0047	Aspergillus terreus	32.05	2e-14	79.3
LLPS-Lem-0420	Leptosphaeria maculans	32.02	3e-18	90.9
LLPS-Crn-1144	Cryptococcus neoformans	30.43	8e-14	77.0
LLPS-Cogr-0379	Colletotrichum graminicola	29.13	1e-15	82.8
LLPS-Asf-0486	Aspergillus flavus	28.72	1e-10	67.0
LLPS-Via-1374	Vigna angularis	27.53	3e-10	65.1

LLPS-Dar-0914rbm34

Protein Sequence

Nucleotide Sequence

LLPS-Dar-0914
rbm34