LLPS-Cus-2305
Csa_5G517820
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Pectate lyase |
| Gene Name: | Csa_5G517820 |
| Ensembl Gene: | Csa_5G517820 |
| Ensembl Protein: | KGN51335 |
| Organism: | Cucumis sativus |
| Taxa ID: | 3659 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | KGN51335 | KGN51335 |
| UniProt | A0A0A0KNX3, A0A0A0KNX3_CUCSA | |
| GeneBank | CM002926 | KGN51335.1 |
| RefSeq | XM_004142725.2 | XP_004142773.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MAASSSSSSS LYFLLLLLSL SFFLSMTAPL PSNSSLPFVH QHPHLVVEEV QRSINGSRRN 60 61 LGYLSCGTGN PIDDCWRCDS NWETNRKRLA DCAIGFGKNA IGGKNGRFYV VTDSGNDDPL 120 121 NPRPGTLRHA VIQNEPLWII FKRDMVIKLA QELVMNSFKT IDGRGASVHL AGGPCIKIHY 180 181 ATNIIIHGIH IHDCKRGGNA NIRDSPQHAG WWTASDGDGV SILGGKQIWI DHCSLSNCND 240 241 GLIDAIHGST AITISNNYMT HHDKVMLLGH SDSFTQDKNM QVTIAFNHFG EGLVQRMPRC 300 301 RHGYFHVVNN DYTHWEMYAI GGSASPTIYS QGNRFVAPYN RFRKEVTKHE DAPESEWRHW 360 361 NWRSEGDLLL NGAYFRQSGA GASSSYARAY SLSARPSSLV GDITITAGAL NCRRGSRC 418 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGCGGCTT CTTCTTCTTC TTCTTCTTCC CTTTACTTTT TGTTGCTTCT TTTATCTCTT 60 61 TCTTTCTTCT TGTCTATGAC TGCTCCACTA CCTTCCAATT CCTCCTTACC TTTTGTTCAT 120 121 CAACATCCTC ATCTCGTCGT TGAAGAAGTT CAAAGGAGCA TAAATGGATC AAGAAGAAAC 180 181 TTGGGGTATT TATCATGTGG AACAGGAAAC CCAATAGACG ATTGTTGGAG ATGCGATTCC 240 241 AATTGGGAAA CAAACCGTAA ACGCTTAGCC GATTGCGCCA TCGGCTTCGG CAAAAACGCA 300 301 ATCGGCGGCA AAAACGGCCG TTTCTACGTA GTCACTGACT CCGGGAACGA CGACCCACTT 360 361 AACCCCCGTC CGGGCACCCT CCGCCACGCC GTCATCCAAA ACGAACCCTT ATGGATCATC 420 421 TTCAAGCGCG ACATGGTAAT CAAACTCGCC CAAGAGCTGG TCATGAACTC CTTCAAAACC 480 481 ATCGACGGAC GTGGCGCCAG CGTCCACCTG GCAGGTGGCC CTTGTATTAA AATCCACTAC 540 541 GCGACGAATA TAATCATCCA CGGCATCCAT ATTCACGATT GCAAGAGAGG TGGGAATGCT 600 601 AACATACGAG ACTCCCCACA GCATGCTGGC TGGTGGACTG CATCTGACGG TGATGGTGTC 660 661 TCCATTTTAG GTGGTAAACA AATCTGGATC GATCATTGCT CTTTGTCTAA TTGTAATGAT 720 721 GGGTTGATTG ACGCCATTCA TGGATCAACG GCTATTACTA TATCCAATAA CTATATGACA 780 781 CATCATGATA AGGTTATGTT ATTGGGACAT AGTGATTCTT TCACCCAAGA TAAAAACATG 840 841 CAAGTTACTA TTGCTTTTAA CCATTTTGGT GAAGGACTTG TCCAACGAAT GCCAAGATGT 900 901 AGACATGGAT ATTTCCATGT AGTGAACAAC GATTACACTC ATTGGGAAAT GTATGCCATC 960 961 GGAGGGAGTG CTTCACCCAC GATATACAGC CAAGGCAATA GATTCGTGGC GCCTTATAAT 1020 1021 CGGTTTCGAA AGGAGGTAAC AAAGCACGAG GACGCACCCG AGAGCGAGTG GCGCCATTGG 1080 1081 AACTGGCGTT CTGAGGGTGA CTTGTTGTTG AATGGCGCCT ATTTTCGCCA ATCAGGCGCT 1140 1141 GGTGCCTCCT CTAGCTATGC ACGAGCTTAT AGTCTCAGCG CTAGACCCTC ATCTCTTGTT 1200 1201 GGGGATATCA CTATCACTGC AGGTGCTCTC AATTGCCGCA GGGGCTCTCG TTGCTAA 1257 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Pot-1257 | Populus trichocarpa | 87.83 | 0.0 | 640 |
| LLPS-Prp-0607 | Prunus persica | 85.5 | 0.0 | 637 |
| LLPS-Bro-2311 | Brassica oleracea | 83.2 | 0.0 | 612 |
| LLPS-Dac-0601 | Daucus carota | 83.11 | 0.0 | 613 |
| LLPS-Brr-2784 | Brassica rapa | 82.47 | 0.0 | 605 |
| LLPS-Sot-2225 | Solanum tuberosum | 80.95 | 0.0 | 595 |
| LLPS-Sol-2430 | Solanum lycopersicum | 80.93 | 0.0 | 583 |
| LLPS-Brn-0830 | Brassica napus | 80.93 | 0.0 | 629 |
| LLPS-Via-1418 | Vigna angularis | 80.92 | 0.0 | 632 |
| LLPS-Art-1676 | Arabidopsis thaliana | 80.51 | 0.0 | 605 |
| LLPS-Arl-0360 | Arabidopsis lyrata | 80.15 | 0.0 | 597 |
| LLPS-Hea-2348 | Helianthus annuus | 79.89 | 0.0 | 590 |
| LLPS-Nia-2579 | Nicotiana attenuata | 79.02 | 0.0 | 599 |