LLPS-Coc-1684
CCACVL1_24105
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Chlorophyll a-b binding protein, chloroplastic |
| Gene Name: | CCACVL1_24105 |
| Ensembl Gene: | CCACVL1_24105 |
| Ensembl Protein: | OMO60483 |
| Organism: | Corchorus capsularis |
| Taxa ID: | 210143 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ FUNCTION
| The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated. |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | OMO60483 | OMO60483 |
| UniProt | A0A1R3GQW5, A0A1R3GQW5_COCAP | |
| GeneBank | AWWV01013694 | OMO60483.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MASVCASSAI AAISSPRQVS QKSGSIVGAT KASFLSGKKL RSVRKYTAPA AVRSVVVGAA 60 61 ADPDRPLWFP GSTPPPWLDG SLPGDFGFDP LGLGSDPETL RWNVQAELVH CRWAMLGAAG 120 121 IFIPEFLTKI GILNTPSWYD AGTEEYFTDT TTLFIVELIF IGWAEGRRWA DILKPGCVNT 180 181 DPIFPNNKLT GTDVGYPGGL WFDPLGWGSG SPEKIKELRT KEIKNGRLAM LAVMGAWFQH 240 241 IYTGTGPIDN LFAHLADPGH ATIFAAFTPK 270 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGCCTCTG TTTGTGCTTC TTCTGCCATT GCAGCCATCT CTTCTCCCAG GCAAGTTTCC 60 61 CAGAAGAGTG GATCAATTGT GGGAGCAACA AAGGCTTCAT TCCTCAGTGG GAAGAAATTG 120 121 AGATCAGTGA GAAAGTACAC AGCTCCAGCT GCCGTACGAT CAGTCGTCGT GGGTGCCGCC 180 181 GCTGACCCCG ACAGACCCCT CTGGTTCCCC GGCAGCACTC CTCCTCCATG GCTCGACGGC 240 241 AGTCTCCCTG GTGACTTTGG TTTTGATCCT CTAGGTCTTG GATCAGATCC AGAGACATTG 300 301 AGATGGAACG TGCAAGCAGA ACTTGTGCAC TGCAGATGGG CAATGTTGGG AGCAGCAGGA 360 361 ATCTTCATCC CAGAATTCCT AACAAAGATT GGAATTCTCA ACACTCCTTC ATGGTACGAT 420 421 GCTGGAACAG AGGAATACTT CACAGACACC ACAACCCTCT TCATAGTTGA GCTTATTTTC 480 481 ATTGGCTGGG CTGAAGGAAG AAGATGGGCT GACATCCTCA AGCCAGGCTG TGTAAACACT 540 541 GACCCCATTT TCCCCAACAA CAAGCTCACT GGGACCGATG TTGGGTACCC GGGTGGGCTC 600 601 TGGTTCGACC CACTGGGCTG GGGAAGTGGT TCACCTGAGA AAATCAAGGA ATTGAGGACA 660 661 AAAGAGATCA AGAATGGTAG ATTGGCTATG TTGGCTGTGA TGGGTGCTTG GTTCCAACAC 720 721 ATTTACACTG GCACTGGTCC TATTGACAAC CTCTTTGCCC ACCTCGCCGA TCCCGGTCAT 780 781 GCTACCATTT TTGCTGCTTT CACCCCCAAG TGA 813 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Chloroplast thylakoid membrane | |
Cellular Component | Integral component of membrane | |
Cellular Component | Photosystem I | |
Cellular Component | Photosystem II | |
Molecular Function | Chlorophyll binding | |
Biological Process | Photosynthesis, light harvesting | |
Biological Process | Protein-chromophore linkage |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Mae-0989 | Manihot esculenta | 95.62 | 1e-164 | 465 |
| LLPS-Gor-0470 | Gossypium raimondii | 94.74 | 2e-163 | 462 |
| LLPS-Sot-0367 | Solanum tuberosum | 94.23 | 3e-103 | 304 |
| LLPS-Orbr-0204 | Oryza brachyantha | 93.75 | 8e-143 | 409 |
| LLPS-Thc-0285 | Theobroma cacao | 93.25 | 3e-164 | 464 |
| LLPS-Pot-0269 | Populus trichocarpa | 92.55 | 1e-162 | 460 |
| LLPS-Arl-1710 | Arabidopsis lyrata | 91.87 | 4e-141 | 404 |
| LLPS-Brd-1470 | Brachypodium distachyon | 91.83 | 2e-137 | 395 |
| LLPS-Tra-2247 | Triticum aestivum | 91.83 | 4e-139 | 399 |
| LLPS-Tru-1057 | Triticum urartu | 91.57 | 2e-107 | 317 |
| LLPS-Art-0392 | Arabidopsis thaliana | 91.39 | 1e-140 | 403 |
| LLPS-Cus-1000 | Cucumis sativus | 90.08 | 3e-148 | 423 |
| LLPS-Hov-0010 | Hordeum vulgare | 89.9 | 5e-135 | 390 |
| LLPS-Glm-2170 | Glycine max | 88.45 | 2e-157 | 447 |
| LLPS-Phv-2347 | Phaseolus vulgaris | 87.7 | 5e-155 | 440 |
| LLPS-Hea-0557 | Helianthus annuus | 87.6 | 7e-150 | 427 |
| LLPS-Vir-1887 | Vigna radiata | 87.5 | 8e-150 | 428 |
| LLPS-Viv-1999 | Vitis vinifera | 87.35 | 1e-154 | 439 |
| LLPS-Prp-1868 | Prunus persica | 86.96 | 2e-153 | 436 |
| LLPS-Sol-2504 | Solanum lycopersicum | 86.85 | 2e-156 | 444 |
| LLPS-Nia-1447 | Nicotiana attenuata | 86.85 | 1e-157 | 447 |
| LLPS-Sei-1177 | Setaria italica | 85.6 | 7e-140 | 401 |
| LLPS-Zem-1685 | Zea mays | 85.48 | 5e-139 | 399 |
| LLPS-Bro-0267 | Brassica oleracea | 85.36 | 4e-143 | 410 |
| LLPS-Met-0499 | Medicago truncatula | 85.26 | 6e-149 | 425 |
| LLPS-Via-1740 | Vigna angularis | 85.17 | 5e-153 | 437 |
| LLPS-Brr-2654 | Brassica rapa | 85.11 | 7e-140 | 401 |
| LLPS-Brn-0142 | Brassica napus | 84.26 | 4e-139 | 399 |
| LLPS-Amt-1375 | Amborella trichopoda | 84.23 | 2e-144 | 413 |
| LLPS-Lep-1187 | Leersia perrieri | 83.0 | 4e-145 | 415 |
| LLPS-Orni-2011 | Oryza nivara | 82.73 | 5e-145 | 414 |
| LLPS-Ori-1670 | Oryza indica | 82.73 | 5e-145 | 414 |
| LLPS-Orb-0554 | Oryza barthii | 82.73 | 5e-145 | 414 |
| LLPS-Ors-0120 | Oryza sativa | 82.73 | 5e-145 | 414 |
| LLPS-Orr-2288 | Oryza rufipogon | 82.73 | 5e-145 | 414 |
| LLPS-Orp-0845 | Oryza punctata | 82.47 | 6e-145 | 414 |
| LLPS-Orgl-2104 | Oryza glumaepatula | 82.33 | 5e-145 | 415 |
| LLPS-Sob-2350 | Sorghum bicolor | 81.96 | 3e-141 | 405 |
| LLPS-Mua-2073 | Musa acuminata | 75.31 | 1e-118 | 347 |
| LLPS-Sem-1634 | Selaginella moellendorffii | 72.94 | 2e-129 | 375 |
| LLPS-Php-2287 | Physcomitrella patens | 69.84 | 1e-118 | 348 |
| LLPS-Org-0560 | Oryza glaberrima | 54.23 | 4e-70 | 223 |
| LLPS-Chr-1535 | Chlamydomonas reinhardtii | 52.91 | 1e-62 | 204 |
| LLPS-Dac-0778 | Daucus carota | 49.17 | 1e-72 | 229 |
| LLPS-Orm-1511 | Oryza meridionalis | 44.8 | 9e-49 | 169 |
| LLPS-Osl-0544 | Ostreococcus lucimarinus | 39.73 | 2e-35 | 134 |