LLPS-Coc-1543
CCACVL1_15103
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | RNA polymerase I associated factor, A49-like protein |
| Gene Name: | CCACVL1_15103 |
| Ensembl Gene: | CCACVL1_15103 |
| Ensembl Protein: | OMO77305 |
| Organism: | Corchorus capsularis |
| Taxa ID: | 210143 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | OMO77305 | OMO77305 |
| UniProt | A0A1R3I3X5, A0A1R3I3X5_COCAP | |
| GeneBank | AWWV01010763 | OMO77305.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MEKQEPSSSK SRTKKSKKAN REEKQKEPIK PVPESPEAKQ ENIQVKIQLF QDQPKKIPPL 60 61 VAYFPSGYNP CKTNPHEEED DGDGPNNNSN QPRVKVYRNL AQNKHNRLEI VVSPSGSNVD 120 121 FVGSSYRGEA AAAQVCRYSL GVLDKEFGTL KIVPIASNKI FRLEPRVRSL KTANKDDLDS 180 181 ARSEVTAETK EDKLGELTAL YGTKKDRKKR KDMLALKKEA DPESQKSLDK KIEQIAFNKE 240 241 ALGDTTALVA RNIPPHDSSA TSPQDAYPLD QIILNGDWDF LEEDIYRLWQ EGGEESSNAY 300 301 PTFVCNRIKK LEAIEDEDEK WKLACLFSFI THLLKFNDQC KLDRVASAKN HKIPNVIRQR 360 361 FLSMFAADQE SKSRSPDQIN RLISYVLVLT LHADQFRTDP RDIAKDLSMS DVSLRTHFEN 420 421 LGCKLTREKK VLYATLPVPL KFPSENLKRK RRR 453 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGAAAAAC AAGAACCATC ATCATCAAAA TCAAGAACCA AGAAGTCTAA GAAGGCAAAC 60 61 AGAGAAGAGA AGCAAAAAGA ACCGATTAAA CCAGTGCCAG AAAGCCCTGA AGCGAAGCAG 120 121 GAGAATATAC AAGTGAAAAT CCAACTTTTC CAAGACCAAC CAAAAAAGAT TCCTCCTTTA 180 181 GTTGCCTATT TCCCATCTGG CTACAACCCT TGCAAAACCA ATCCACACGA GGAAGAAGAT 240 241 GATGGAGATG GACCCAACAA CAACAGCAAC CAACCAAGGG TCAAGGTTTA TAGAAACCTG 300 301 GCTCAAAATA AGCATAATAG GCTGGAGATT GTGGTTAGCC CAAGTGGGTC CAATGTGGAT 360 361 TTTGTTGGAT CAAGTTATCG TGGTGAGGCA GCTGCTGCAC AAGTGTGCAG GTACTCGCTT 420 421 GGGGTTCTTG ATAAGGAGTT TGGGACTCTC AAGATTGTTC CTATTGCTTC TAATAAGATA 480 481 TTTAGATTAG AGCCGAGAGT TAGAAGCTTG AAGACTGCTA ATAAGGATGA TTTAGATTCA 540 541 GCAAGGAGTG AAGTTACAGC TGAAACCAAG GAGGACAAAT TGGGAGAGCT TACTGCACTT 600 601 TATGGAACAA AGAAGGATAG AAAGAAGAGG AAGGATATGC TTGCTTTGAA AAAGGAAGCT 660 661 GATCCTGAAT CACAAAAGTC CTTGGACAAA AAGATTGAGC AAATTGCGTT CAACAAGGAG 720 721 GCTCTGGGGG ACACCACTGC CCTTGTTGCT CGTAATATCC CTCCACATGA CTCCTCCGCT 780 781 ACTTCACCCC AAGATGCTTA TCCGTTGGAC CAGATTATTC TCAACGGAGA CTGGGATTTC 840 841 CTTGAAGAAG ATATATATAG GCTTTGGCAA GAAGGAGGAG AAGAATCGAG CAATGCTTAT 900 901 CCAACTTTTG TTTGCAACAG GATTAAGAAA TTGGAAGCCA TCGAGGATGA AGACGAGAAG 960 961 TGGAAACTCG CATGTCTTTT TTCATTTATC ACTCATCTTC TGAAGTTCAA TGATCAGTGC 1020 1021 AAACTGGATA GAGTTGCTTC TGCAAAGAAC CACAAGATTC CTAACGTAAT ACGCCAGAGG 1080 1081 TTTCTTTCCA TGTTTGCTGC TGATCAAGAG TCAAAAAGTC GGTCCCCTGA CCAAATTAAC 1140 1141 CGTCTAATAA GTTATGTCTT GGTGCTCACT TTACATGCCG ATCAATTTCG AACTGACCCA 1200 1201 AGAGATATAG CTAAGGATCT ATCAATGAGC GATGTAAGTT TGAGAACTCA CTTCGAAAAT 1260 1261 TTGGGGTGCA AACTCACACG TGAGAAGAAA GTGCTATATG CTACCCTTCC TGTCCCTCTA 1320 1321 AAATTCCCTT CTGAGAATTT GAAGCGGAAG CGGAGACGCT AG 1362 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Thc-0179 | Theobroma cacao | 72.98 | 0.0 | 633 |
| LLPS-Gor-0068 | Gossypium raimondii | 66.59 | 0.0 | 582 |
| LLPS-Viv-1432 | Vitis vinifera | 55.1 | 1e-144 | 427 |
| LLPS-Mae-0015 | Manihot esculenta | 52.82 | 2e-141 | 422 |
| LLPS-Sot-1230 | Solanum tuberosum | 52.17 | 1e-137 | 409 |
| LLPS-Cus-0713 | Cucumis sativus | 52.06 | 1e-140 | 417 |
| LLPS-Pot-0929 | Populus trichocarpa | 51.87 | 3e-144 | 428 |
| LLPS-Glm-0066 | Glycine max | 51.8 | 5e-133 | 397 |
| LLPS-Nia-1496 | Nicotiana attenuata | 51.09 | 9e-130 | 390 |
| LLPS-Sol-1080 | Solanum lycopersicum | 50.97 | 1e-134 | 401 |
| LLPS-Prp-1132 | Prunus persica | 50.36 | 3e-137 | 408 |
| LLPS-Via-1954 | Vigna angularis | 49.38 | 5e-117 | 356 |
| LLPS-Phv-1202 | Phaseolus vulgaris | 49.01 | 2e-113 | 347 |
| LLPS-Hea-0501 | Helianthus annuus | 46.63 | 4e-112 | 344 |
| LLPS-Vir-1601 | Vigna radiata | 46.05 | 4e-120 | 365 |
| LLPS-Met-0460 | Medicago truncatula | 45.99 | 4e-114 | 349 |
| LLPS-Art-0376 | Arabidopsis thaliana | 44.28 | 2e-110 | 340 |
| LLPS-Brn-2266 | Brassica napus | 43.72 | 3e-103 | 321 |
| LLPS-Bro-2859 | Brassica oleracea | 43.72 | 3e-103 | 321 |
| LLPS-Brr-0139 | Brassica rapa | 43.33 | 6e-104 | 323 |
| LLPS-Arl-1058 | Arabidopsis lyrata | 43.15 | 1e-114 | 351 |
| LLPS-Mua-1112 | Musa acuminata | 42.35 | 1e-97 | 306 |
| LLPS-Dac-1969 | Daucus carota | 42.23 | 1e-102 | 320 |
| LLPS-Sem-1487 | Selaginella moellendorffii | 42.16 | 2e-17 | 82.8 |
| LLPS-Lep-1699 | Leersia perrieri | 38.07 | 2e-64 | 223 |
| LLPS-Orbr-0033 | Oryza brachyantha | 38.02 | 4e-69 | 234 |
| LLPS-Brd-0874 | Brachypodium distachyon | 37.69 | 6e-66 | 226 |
| LLPS-Amt-1295 | Amborella trichopoda | 37.67 | 4e-86 | 277 |
| LLPS-Sei-2460 | Setaria italica | 37.56 | 4e-67 | 229 |
| LLPS-Tra-0366 | Triticum aestivum | 37.32 | 3e-72 | 241 |
| LLPS-Hov-0960 | Hordeum vulgare | 37.08 | 3e-65 | 222 |
| LLPS-Orgl-1236 | Oryza glumaepatula | 36.59 | 7e-63 | 218 |
| LLPS-Ori-1669 | Oryza indica | 36.45 | 7e-65 | 221 |
| LLPS-Orb-2245 | Oryza barthii | 36.45 | 1e-64 | 222 |
| LLPS-Orni-1482 | Oryza nivara | 36.45 | 1e-64 | 222 |
| LLPS-Orr-0638 | Oryza rufipogon | 36.45 | 1e-64 | 222 |
| LLPS-Org-0029 | Oryza glaberrima | 36.45 | 1e-64 | 222 |
| LLPS-Sob-1110 | Sorghum bicolor | 35.94 | 2e-62 | 216 |
| LLPS-Ors-1508 | Oryza sativa | 35.31 | 5e-58 | 204 |
| LLPS-Zem-1119 | Zea mays | 34.35 | 1e-59 | 209 |
| LLPS-Php-1054 | Physcomitrella patens | 33.88 | 1e-58 | 206 |
| LLPS-Gas-1316 | Galdieria sulphuraria | 29.97 | 4e-22 | 101 |
| LLPS-Pug-1077 | Puccinia graminis | 25.66 | 1e-11 | 70.1 |
| LLPS-Kop-0336 | Komagataella pastoris | 25.11 | 1e-07 | 57.8 |
| LLPS-Tum-0420 | Tuber melanosporum | 24.91 | 8e-12 | 70.9 |
| LLPS-Abg-0302 | Absidia glauca | 24.86 | 3e-16 | 84.7 |
| LLPS-Scc-1138 | Schizosaccharomyces cryophilus | 24.48 | 4e-10 | 65.9 |
| LLPS-Phn-0167 | Phaeosphaeria nodorum | 24.17 | 2e-07 | 57.0 |
| LLPS-Scp-0473 | Schizosaccharomyces pombe | 24.16 | 1e-09 | 63.9 |
| LLPS-Mao-0102 | Magnaporthe oryzae | 23.82 | 5e-09 | 62.4 |
| LLPS-Put-0043 | Puccinia triticina | 23.48 | 8e-09 | 61.6 |
| LLPS-Lem-1078 | Leptosphaeria maculans | 23.1 | 3e-06 | 53.5 |
| LLPS-Ran-0146 | Rattus norvegicus | 23.04 | 9e-13 | 73.9 |
| LLPS-Ten-0377 | Tetraodon nigroviridis | 22.92 | 2e-06 | 54.3 |
| LLPS-Scj-0445 | Schizosaccharomyces japonicus | 22.83 | 9e-08 | 58.2 |
| LLPS-Myl-0035 | Myotis lucifugus | 22.63 | 6e-16 | 84.0 |
| LLPS-Fud-2663 | Fukomys damarensis | 22.5 | 4e-12 | 72.0 |
| LLPS-Scm-0116 | Scophthalmus maximus | 22.43 | 8e-07 | 55.5 |
| LLPS-Fec-0051 | Felis catus | 22.38 | 3e-13 | 75.5 |
| LLPS-Pyt-0864 | Pyrenophora teres | 22.29 | 4e-08 | 59.3 |
| LLPS-Asm-1123 | Astyanax mexicanus | 22.22 | 2e-10 | 66.6 |
| LLPS-Orn-1016 | Oreochromis niloticus | 22.22 | 1e-06 | 55.1 |
| LLPS-Fia-0273 | Ficedula albicollis | 22.03 | 2e-08 | 60.1 |
| LLPS-Xim-0744 | Xiphophorus maculatus | 22.02 | 3e-10 | 66.2 |
| LLPS-Icp-0537 | Ictalurus punctatus | 21.98 | 2e-12 | 72.4 |
| LLPS-Cas-0754 | Carlito syrichta | 21.93 | 2e-12 | 72.8 |
| LLPS-Cap-0728 | Cavia porcellus | 21.81 | 1e-11 | 70.5 |
| LLPS-Urm-0290 | Ursus maritimus | 21.81 | 6e-08 | 58.9 |
| LLPS-Orc-1274 | Oryctolagus cuniculus | 21.74 | 2e-13 | 75.9 |
| LLPS-Sus-1294 | Sus scrofa | 21.71 | 1e-13 | 76.6 |
| LLPS-Pytr-0358 | Pyrenophora triticirepentis | 21.71 | 8e-09 | 61.6 |
| LLPS-Eqc-0415 | Equus caballus | 21.69 | 1e-12 | 73.6 |
| LLPS-Aon-1954 | Aotus nancymaae | 21.65 | 1e-10 | 67.4 |
| LLPS-Poa-0759 | Pongo abelii | 21.59 | 2e-13 | 75.9 |
| LLPS-Fuo-0371 | Fusarium oxysporum | 21.58 | 4e-08 | 59.3 |
| LLPS-Bot-0149 | Bos taurus | 21.55 | 8e-15 | 80.5 |
| LLPS-Mum-0640 | Mus musculus | 21.55 | 2e-10 | 67.0 |
| LLPS-Paa-3626 | Papio anubis | 21.53 | 3e-13 | 75.5 |
| LLPS-Mal-2959 | Mandrillus leucophaeus | 21.53 | 4e-13 | 75.1 |
| LLPS-Cea-2644 | Cercocebus atys | 21.53 | 3e-13 | 75.5 |
| LLPS-Chs-1558 | Chlorocebus sabaeus | 21.53 | 2e-12 | 73.2 |
| LLPS-Maf-0649 | Macaca fascicularis | 21.53 | 8e-13 | 74.3 |
| LLPS-Mam-2296 | Macaca mulatta | 21.53 | 3e-13 | 75.5 |
| LLPS-Caf-1488 | Canis familiaris | 21.52 | 1e-13 | 77.0 |
| LLPS-Ict-0711 | Ictidomys tridecemlineatus | 21.52 | 2e-12 | 73.2 |
| LLPS-Pes-0046 | Pelodiscus sinensis | 21.39 | 1e-07 | 58.2 |
| LLPS-Fuv-1101 | Fusarium verticillioides | 21.35 | 4e-08 | 59.3 |
| LLPS-Gaga-1975 | Gallus gallus | 21.3 | 1e-07 | 57.8 |
| LLPS-Mod-1432 | Monodelphis domestica | 21.23 | 3e-11 | 69.3 |
| LLPS-Mea-2070 | Mesocricetus auratus | 21.22 | 5e-10 | 65.5 |
| LLPS-Rhb-1561 | Rhinopithecus bieti | 21.22 | 4e-13 | 75.1 |
| LLPS-Otg-2218 | Otolemur garnettii | 21.17 | 1e-12 | 73.6 |
| LLPS-Xet-2467 | Xenopus tropicalis | 21.14 | 2e-09 | 63.9 |
| LLPS-Leo-1431 | Lepisosteus oculatus | 21.12 | 7e-08 | 58.5 |
| LLPS-Caj-3112 | Callithrix jacchus | 21.09 | 6e-07 | 55.5 |
| LLPS-Scf-0852 | Scleropages formosus | 21.04 | 2e-07 | 57.0 |
| LLPS-Ova-0388 | Ovis aries | 21.03 | 8e-15 | 80.5 |
| LLPS-Nol-0809 | Nomascus leucogenys | 20.86 | 3e-12 | 72.4 |
| LLPS-Tut-0020 | Tursiops truncatus | 20.76 | 1e-12 | 73.9 |
| LLPS-Gog-0046 | Gorilla gorilla | 20.54 | 3e-12 | 72.4 |
| LLPS-Pat-3205 | Pan troglodytes | 20.54 | 3e-12 | 72.4 |
| LLPS-Pap-0547 | Pan paniscus | 20.54 | 3e-12 | 72.4 |
| LLPS-Hos-1037 | Homo sapiens | 20.4 | 3e-12 | 72.8 |
| LLPS-Loa-3216 | Loxodonta africana | 20.09 | 4e-06 | 53.1 |