LLPS-Cii-2392
LOC100180664
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | E3 ubiquitin-protein ligase RNF25-like |
| Gene Name: | LOC100180664 |
| Ensembl Gene: | ENSCING00000005762.2 |
| Ensembl Protein: | ENSCINP00000011893.2 |
| Organism: | Ciona intestinalis |
| Taxa ID: | 7719 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Stress granule | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | ENSCINT00000011893.2 | ENSCINP00000011893.2 |
| UniProt | F6PU23, F6PU23_CIOIN, A0A1W2W9R5 | |
| RefSeq | , XM_002124071.1 | , XP_002124107.1, XP_002124107.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MDDSGASNSC VEDEIMVLQS IYEDKIKIQR DLDNKVKEVG ICLYPATADD TSSQYLKLEL 60 61 VFSIPDQYPE EHLKFTFKSS RGLSDEHLNK LKQQMMDLID SHDEDVNLFD LIELAKESLT 120 121 LNNIPCDPCP VCLLSFQADD DFLKSPCFHH FHDHCLLQYY NHYHSNIEYF QTSTNPIDGP 180 181 PKKKSEVPPG QVPCPICREL IEVDIDALQK AKEPVTQELS VENLEEYKRN VKQMNEIYER 240 241 QLKVGGIINL DAEKKKHLLS TIEQKAKSEA LVAKSKQDAQ TKVVGTNSSN SDDRKTTKVF 300 301 PNPSKPNPHQ SHHNHRMVPG RKPFTKDTTE KYRNYNRPRR TYHEPRKPRN VENSKSPPWN 360 361 NQPKPNKHRT NFNSSNPTSN PTKHQNHSGI NKKSNFSDVK TPPGFKPIRV GPPPGFKALE 420 421 K 421 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGACGACT CTGGTGCTAG CAATAGTTGC GTGGAAGACG AGATTATGGT ACTTCAGTCT 60 61 ATTTACGAAG ATAAAATAAA AATCCAAAGA GATTTAGATA ATAAAGTTAA AGAAGTTGGA 120 121 ATATGTTTGT ATCCTGCTAC AGCTGATGAT ACAAGTTCAC AATATCTTAA GCTTGAACTT 180 181 GTGTTTAGTA TACCAGATCA GTACCCAGAA GAGCATCTGA AATTTACTTT TAAATCTTCG 240 241 CGTGGATTAT CTGACGAACA TCTGAATAAA CTGAAACAAC AGATGATGGA TTTGATTGAC 300 301 AGCCATGATG AGGATGTGAA CTTGTTTGAC CTCATTGAAC TCGCAAAAGA AAGTTTAACC 360 361 TTAAATAACA TACCATGTGA CCCATGCCCA GTGTGTCTGC TATCTTTCCA GGCTGATGAT 420 421 GATTTCCTGA AGTCTCCATG TTTCCACCAC TTCCATGACC ACTGCTTGCT ACAATACTAC 480 481 AACCACTACC ATTCAAATAT CGAGTATTTT CAAACCTCAA CAAACCCTAT CGATGGCCCA 540 541 CCAAAAAAGA AATCTGAAGT TCCACCCGGA CAAGTTCCTT GCCCCATATG TAGAGAGTTG 600 601 ATTGAAGTAG ATATTGATGC ATTACAAAAA GCAAAGGAAC CAGTAACTCA GGAACTTTCT 660 661 GTTGAGAATC TTGAAGAATA CAAAAGAAAC GTAAAGCAAA TGAATGAAAT TTATGAACGA 720 721 CAACTTAAAG TCGGTGGTAT TATTAATCTA GATGCGGAAA AAAAGAAACA CTTGCTCTCA 780 781 ACTATTGAGC AGAAAGCAAA ATCCGAAGCA CTTGTTGCAA AATCAAAACA AGATGCTCAA 840 841 ACCAAAGTAG TTGGAACGAA CAGTTCAAAT AGCGATGACA GGAAAACCAC CAAAGTATTT 900 901 CCAAATCCAA GCAAACCCAA CCCCCACCAA AGTCACCACA ATCATAGAAT GGTCCCTGGA 960 961 CGAAAACCAT TCACGAAAGA TACAACGGAA AAATACAGAA ATTATAACAG ACCTAGAAGA 1020 1021 ACTTACCATG AACCAAGAAA ACCAAGAAAT GTCGAAAATT CAAAATCTCC GCCTTGGAAC 1080 1081 AACCAACCTA AACCAAACAA ACATCGAACA AATTTCAATT CAAGCAATCC TACAAGCAAT 1140 1141 CCTACAAAGC ACCAAAATCA TTCAGGAATA AATAAGAAGT CAAATTTTTC AGATGTTAAA 1200 1201 ACACCTCCTG GTTTTAAACC AATCAGAGTT GGCCCACCAC CTGGATTTAA AGCGCTGGAA 1260 1261 AAATAG 1266 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Cis-1220 | Ciona savignyi | 51.08 | 4e-118 | 358 |
| LLPS-Leo-3583 | Lepisosteus oculatus | 41.86 | 2e-10 | 62.4 |
| LLPS-Mea-1348 | Mesocricetus auratus | 40.19 | 5e-17 | 81.3 |
| LLPS-Dio-2226 | Dipodomys ordii | 39.81 | 4e-15 | 75.9 |
| LLPS-Fud-3218 | Fukomys damarensis | 39.25 | 4e-15 | 76.3 |
| LLPS-Cap-2441 | Cavia porcellus | 39.25 | 2e-14 | 73.9 |
| LLPS-Tag-1951 | Taeniopygia guttata | 37.12 | 1e-40 | 155 |
| LLPS-Fia-1749 | Ficedula albicollis | 36.22 | 2e-44 | 167 |
| LLPS-Anc-1993 | Anolis carolinensis | 36.08 | 9e-45 | 168 |
| LLPS-Mam-4565 | Macaca mulatta | 35.85 | 2e-35 | 140 |
| LLPS-Mod-0005 | Monodelphis domestica | 35.19 | 2e-45 | 169 |
| LLPS-Dar-3591 | Danio rerio | 35.16 | 1e-36 | 145 |
| LLPS-Lac-1809 | Latimeria chalumnae | 35.04 | 3e-39 | 151 |
| LLPS-Pat-4765 | Pan troglodytes | 35.0 | 1e-41 | 159 |
| LLPS-Pof-3241 | Poecilia formosa | 34.9 | 9e-36 | 141 |
| LLPS-Gaa-0737 | Gasterosteus aculeatus | 34.65 | 1e-37 | 147 |
| LLPS-Loa-2639 | Loxodonta africana | 34.46 | 3e-42 | 160 |
| LLPS-Tar-2257 | Takifugu rubripes | 34.24 | 1e-38 | 150 |
| LLPS-Mum-4449 | Mus musculus | 34.24 | 1e-43 | 164 |
| LLPS-Ten-1892 | Tetraodon nigroviridis | 34.09 | 1e-15 | 78.6 |
| LLPS-Anp-3308 | Anas platyrhynchos | 34.08 | 1e-40 | 155 |
| LLPS-Chs-3778 | Chlorocebus sabaeus | 33.88 | 7e-44 | 164 |
| LLPS-Aon-1129 | Aotus nancymaae | 33.72 | 2e-43 | 163 |
| LLPS-Gaga-1766 | Gallus gallus | 33.66 | 3e-22 | 101 |
| LLPS-Pap-2253 | Pan paniscus | 33.59 | 1e-41 | 158 |
| LLPS-Myl-4017 | Myotis lucifugus | 33.53 | 8e-48 | 175 |
| LLPS-Icp-0504 | Ictalurus punctatus | 33.33 | 5e-35 | 139 |
| LLPS-Orn-0157 | Oreochromis niloticus | 33.33 | 7e-37 | 145 |
| LLPS-Xet-1127 | Xenopus tropicalis | 33.21 | 2e-39 | 151 |
| LLPS-Orl-4042 | Oryzias latipes | 33.2 | 1e-32 | 133 |
| LLPS-Meg-3233 | Meleagris gallopavo | 33.17 | 8e-22 | 100 |
| LLPS-Otg-2948 | Otolemur garnettii | 33.12 | 3e-43 | 162 |
| LLPS-Eqc-3213 | Equus caballus | 32.86 | 2e-46 | 171 |
| LLPS-Rhb-2436 | Rhinopithecus bieti | 32.76 | 9e-44 | 164 |
| LLPS-Mal-4429 | Mandrillus leucophaeus | 32.67 | 9e-44 | 164 |
| LLPS-Cea-3429 | Cercocebus atys | 32.67 | 9e-44 | 164 |
| LLPS-Caj-4672 | Callithrix jacchus | 32.45 | 1e-44 | 166 |
| LLPS-Urm-1081 | Ursus maritimus | 32.4 | 3e-45 | 168 |
| LLPS-Aim-2171 | Ailuropoda melanoleuca | 32.39 | 2e-44 | 166 |
| LLPS-Paa-4039 | Papio anubis | 32.34 | 9e-43 | 162 |
| LLPS-Maf-0079 | Macaca fascicularis | 32.34 | 4e-43 | 162 |
| LLPS-Man-3349 | Macaca nemestrina | 32.34 | 4e-43 | 162 |
| LLPS-Sah-3562 | Sarcophilus harrisii | 32.3 | 2e-45 | 168 |
| LLPS-Xim-4164 | Xiphophorus maculatus | 32.2 | 6e-39 | 150 |
| LLPS-Gog-0191 | Gorilla gorilla | 32.12 | 1e-42 | 161 |
| LLPS-Nol-4014 | Nomascus leucogenys | 32.12 | 1e-42 | 161 |
| LLPS-Poa-1264 | Pongo abelii | 32.12 | 1e-42 | 161 |
| LLPS-Ict-3920 | Ictidomys tridecemlineatus | 32.0 | 1e-46 | 172 |
| LLPS-Mup-3112 | Mustela putorius furo | 31.99 | 5e-49 | 179 |
| LLPS-Fec-4207 | Felis catus | 31.88 | 3e-48 | 176 |
| LLPS-Ran-0506 | Rattus norvegicus | 31.79 | 6e-44 | 164 |
| LLPS-Ova-3922 | Ovis aries | 31.52 | 8e-47 | 172 |
| LLPS-Hos-0159 | Homo sapiens | 31.46 | 6e-43 | 162 |
| LLPS-Sus-0739 | Sus scrofa | 31.41 | 2e-48 | 177 |
| LLPS-Caf-3229 | Canis familiaris | 31.4 | 3e-47 | 174 |
| LLPS-Cas-0676 | Carlito syrichta | 31.34 | 1e-42 | 161 |
| LLPS-Tut-0873 | Tursiops truncatus | 31.14 | 4e-45 | 167 |
| LLPS-Bot-2247 | Bos taurus | 30.88 | 5e-46 | 171 |
| LLPS-Orc-2859 | Oryctolagus cuniculus | 30.68 | 2e-43 | 163 |
| LLPS-Asm-0804 | Astyanax mexicanus | 30.35 | 3e-36 | 144 |
| LLPS-Drm-2136 | Drosophila melanogaster | 29.8 | 8e-29 | 120 |
| LLPS-Scm-0709 | Scophthalmus maximus | 29.48 | 5e-36 | 142 |
| LLPS-Thc-1046 | Theobroma cacao | 28.9 | 3e-08 | 58.9 |
| LLPS-Zem-1764 | Zea mays | 28.74 | 3e-10 | 65.9 |
| LLPS-Pes-3205 | Pelodiscus sinensis | 28.57 | 6e-10 | 65.1 |
| LLPS-Bro-1689 | Brassica oleracea | 28.24 | 1e-10 | 66.6 |
| LLPS-Glm-0644 | Glycine max | 27.9 | 4e-10 | 65.1 |
| LLPS-Mae-0384 | Manihot esculenta | 27.18 | 2e-06 | 53.1 |
| LLPS-Via-2061 | Vigna angularis | 27.07 | 8e-10 | 64.3 |
| LLPS-Phv-2264 | Phaseolus vulgaris | 26.64 | 2e-11 | 69.3 |
| LLPS-Brr-2489 | Brassica rapa | 26.51 | 2e-09 | 62.8 |
| LLPS-Arl-2816 | Arabidopsis lyrata | 26.45 | 9e-12 | 70.1 |
| LLPS-Brn-0923 | Brassica napus | 26.43 | 5e-10 | 64.7 |
| LLPS-Coc-1895 | Corchorus capsularis | 26.16 | 1e-09 | 63.5 |
| LLPS-Sot-1366 | Solanum tuberosum | 25.79 | 2e-12 | 72.4 |
| LLPS-Hea-1865 | Helianthus annuus | 25.68 | 9e-10 | 64.3 |
| LLPS-Sei-2492 | Setaria italica | 25.67 | 1e-12 | 73.2 |
| LLPS-Gor-1347 | Gossypium raimondii | 25.53 | 1e-09 | 63.9 |
| LLPS-Lep-1465 | Leersia perrieri | 25.45 | 1e-08 | 60.8 |
| LLPS-Orb-1278 | Oryza barthii | 25.2 | 8e-09 | 61.2 |
| LLPS-Orr-1460 | Oryza rufipogon | 25.2 | 7e-09 | 61.2 |
| LLPS-Sol-1439 | Solanum lycopersicum | 24.84 | 1e-11 | 70.1 |
| LLPS-Sob-1892 | Sorghum bicolor | 24.8 | 3e-10 | 65.5 |
| LLPS-Art-3082 | Arabidopsis thaliana | 24.69 | 1e-07 | 57.8 |
| LLPS-Orp-0559 | Oryza punctata | 24.61 | 1e-09 | 63.5 |
| LLPS-Brd-0937 | Brachypodium distachyon | 24.46 | 1e-09 | 63.9 |
| LLPS-Prp-1966 | Prunus persica | 24.29 | 5e-09 | 62.0 |
| LLPS-Orgl-2055 | Oryza glumaepatula | 24.22 | 2e-08 | 60.1 |
| LLPS-Orni-2156 | Oryza nivara | 24.22 | 3e-08 | 59.3 |
| LLPS-Ori-0430 | Oryza indica | 24.22 | 9e-09 | 61.2 |
| LLPS-Orm-1837 | Oryza meridionalis | 24.22 | 7e-09 | 61.6 |
| LLPS-Mua-0635 | Musa acuminata | 24.11 | 2e-10 | 65.9 |
| LLPS-Orbr-2296 | Oryza brachyantha | 23.74 | 9e-07 | 54.7 |
| LLPS-Org-1677 | Oryza glaberrima | 23.66 | 9e-07 | 54.7 |
| LLPS-Tra-2694 | Triticum aestivum | 23.6 | 5e-09 | 61.6 |
| LLPS-Met-1676 | Medicago truncatula | 23.02 | 2e-08 | 60.1 |
| LLPS-Cae-1321 | Caenorhabditis elegans | 22.7 | 1e-07 | 57.0 |