• Disorder▼
  • Domain▼
  • PTM▼
  • Variation▼
  • Mutation▼
  • Interaction▼
  • Disease▼
  • Drug▼
  • Physicochemical▼
  • Function▼
  • Proteomics▼
  • Structure▼
  • Localization▼
  • Expression▼
  • Element▼
  • Methylation▼

LLPS-Cii-0251
LOC100178056

Integrated Annotations

▼ OVERVIEW

Status: Unreviewed
Protein Name: splicing factor 3B subunit 3 isoform X1
Gene Name: LOC100178056
Ensembl Gene: ENSCING00000001342.3
Ensembl Protein: ENSCINP00000002626.3
Organism: Ciona intestinalis
Taxa ID: 7719
LLPS Type: Others


▼ Classification

Condensates:
CondensateEvidenceOrthologs
NucleolusPredicted from orthologs(View)

▼ SEQUENCE

Protein Sequence (FASTA)
1     MFLYGLTLQR  ATTIIHAVHG  NFSGTKQQEI  AVSRGKLLEL  LKPDPNTGKV  HTLITVEVFG  60
61    EIRSLMSFRL  TGGNKDYVVC  GSDSGRISIL  EYIPNKNKFE  KIHLETFGKS  GCRRIVPGQY  120
121   LAIDPKGRAV  MIGALEKQKL  VYILNRDSQA  RLTISSPLEA  HKANTFVYHM  VGIDVGFENP  180
181   MFACLELDYE  EADTDPTGEA  VQNTQQTLTF  YELDLGLNHV  VRKYSEPLEE  RANHLISVPG  240
241   GNDGPGGVLV  CAENYITYKN  FGDQPDIRTP  IPRRRNDLDD  PERGMIVVCS  ATHKTKSMFF  300
301   FLIQTEQGDI  FKVTLETDED  MVTEIRLKYF  DTVPVSMAMC  VLRTGFLFVA  AEMGNHCLYQ  360
361   IAHLGDDDDE  TEFSSAMPLE  EGDTFFYAPR  ALRNLVLVDE  LDSLSPIMTC  LISDLANEDT  420
421   PQLYVTCGRG  PRSSLRVLRH  GLEVSEMAVS  ELPGNPNAVW  TVKIKEEEEF  DSYIIVSFVN  480
481   ATLVLSIGET  VEEVTDSGFL  GTTPTLSCSL  LGENALVQVY  PDGIRHIRAD  KRVNEWKTPG  540
541   KKTILRCAVN  QRQVVIALTG  GELVYFEMDQ  SGQLNEYTER  KEMNSEVVCM  DLSKVPPTEQ  600
601   RTRFLAVGLA  DNTVRIISLD  PTDCLQPLSM  QALPATPESV  CIIEIGGGED  ETGAQKASGG  660
661   LVLNIGLQNG  VLLRTTLDNV  TGDLSDTRTR  YLGTRAVKLF  RVLTQGSDAV  LAMSSRTWLS  720
721   YQHQNRFHLT  PLSYESLEFA  SGFASEQCPE  GIVAISANTL  RILALEKLGT  VFNQASTGLQ  780
781   YTPRRFAIHY  DSGNVIILET  DHNAYTEETK  ENRKQQMAEE  MIEAAGEDER  ELAAEMTAAF  840
841   LRESLPEDKF  GASKAGPGMW  SSQIRLMHPR  SGETIQKICL  EQNEAALSIA  ICKFPNNSDD  900
901   TFVLVGVACE  LLINPRQARG  GGEIHTYKIN  EEGNKLELVH  KTVVDEVPSA  ICPYQGRVLI  960
961   GVGKLLRIYD  LGKKKLLRKC  ENKHIPNYIA  SIQAVGHRII  VCDVQESVHW  VRYRRHENQL  1020
1021  VVFADDTYPR  WVTSATVLDW  NTVAVSDKFG  NISVLRLPSD  VNDDVQDDPS  GTKALWTRGI  1080
1081  LNGAMQKCEV  LCMYHVGETV  LSLQKTTLIP  GGSESLVYTT  LSGSIGMLVP  FTSHEDHDFF  1140
1141  QHLEMHMRNE  CPPLLGRDHL  AYRSYYFPVK  NVIDGDLCEL  FNSMEASKQK  SVAEELDRVP  1200
1201  SEVSKKLEDI  RTRYAF  1216
Nucleotide CDS Sequence (FASTA)
1     ATGTTTTTGT  ATGGGCTGAC  TCTGCAAAGA  GCTACCACCA  TTATTCATGC  AGTCCATGGC  60
61    AACTTTTCGG  GGACAAAACA  GCAGGAAATT  GCCGTTTCCA  GAGGGAAACT  GCTGGAGTTG  120
121   TTGAAGCCAG  ATCCAAACAC  AGGGAAGGTG  CACACACTCA  TCACTGTTGA  AGTGTTCGGA  180
181   GAAATTCGTT  CTTTGATGTC  GTTCCGCTTG  ACTGGAGGCA  ACAAAGATTA  CGTCGTGTGC  240
241   GGTTCAGATT  CTGGAAGAAT  CTCCATCCTT  GAATATATTC  CAAATAAAAA  TAAATTTGAA  300
301   AAGATTCACT  TGGAGACTTT  TGGTAAAAGT  GGATGCAGAA  GGATTGTACC  CGGTCAATAT  360
361   CTTGCTATTG  ATCCCAAAGG  AAGAGCTGTA  ATGATCGGTG  CTTTGGAGAA  GCAGAAGTTG  420
421   GTTTACATTT  TGAATCGAGA  CTCACAAGCA  AGGTTGACCA  TCTCGTCTCC  GCTCGAAGCT  480
481   CATAAAGCAA  ACACATTCGT  CTACCACATG  GTGGGGATAG  ACGTGGGGTT  CGAAAATCCA  540
541   ATGTTTGCTT  GTCTTGAACT  TGATTATGAA  GAAGCAGATA  CCGACCCAAC  TGGCGAAGCT  600
601   GTTCAAAATA  CACAACAGAC  CTTAACCTTC  TATGAGCTTG  ACCTTGGTTT  AAACCATGTG  660
661   GTTCGAAAAT  ACAGCGAGCC  CCTGGAAGAA  CGAGCCAATC  ATCTTATATC  AGTGCCTGGT  720
721   GGTAATGATG  GTCCCGGTGG  TGTGTTAGTG  TGCGCAGAGA  ACTATATCAC  ATACAAGAAC  780
781   TTTGGTGACC  AACCTGATAT  TAGAACCCCT  ATTCCAAGAA  GAAGGAATGA  TCTTGATGAT  840
841   CCAGAGCGAG  GCATGATTGT  GGTATGCAGT  GCAACTCATA  AAACAAAGTC  GATGTTTTTC  900
901   TTTTTAATTC  AAACTGAACA  AGGAGATATA  TTTAAGGTGA  CCCTTGAAAC  AGATGAAGAC  960
961   ATGGTGACCG  AGATTCGACT  TAAATATTTT  GACACTGTTC  CCGTTTCCAT  GGCGATGTGT  1020
1021  GTGTTGAGAA  CTGGTTTCTT  ATTCGTGGCT  GCTGAGATGG  GAAATCATTG  TTTATACCAA  1080
1081  ATTGCTCACC  TTGGAGATGA  CGATGATGAG  ACGGAGTTCT  CGAGCGCGAT  GCCGTTAGAG  1140
1141  GAAGGAGACA  CATTCTTCTA  CGCTCCTCGT  GCGCTGAGGA  ACCTTGTGCT  CGTTGACGAG  1200
1201  CTGGACAGCT  TGTCACCAAT  CATGACTTGC  CTGATATCAG  ATCTTGCAAA  TGAAGACACC  1260
1261  CCACAGTTGT  ATGTAACTTG  TGGTAGAGGT  CCACGTTCAT  CTCTTCGTGT  TTTAAGGCAC  1320
1321  GGGCTTGAGG  TTTCCGAGAT  GGCTGTTTCA  GAACTACCTG  GTAATCCGAA  TGCTGTGTGG  1380
1381  ACTGTAAAGA  TAAAAGAAGA  AGAGGAATTT  GATTCTTACA  TCATCGTGTC  CTTCGTCAAC  1440
1441  GCTACCCTTG  TCCTCTCTAT  CGGAGAAACT  GTTGAAGAAG  TTACAGATTC  TGGATTCTTA  1500
1501  GGAACAACTC  CCACTCTATC  TTGCTCATTG  CTGGGTGAGA  ATGCATTGGT  TCAGGTTTAC  1560
1561  CCGGATGGTA  TTCGGCACAT  CCGAGCTGAC  AAGCGAGTCA  ATGAATGGAA  AACTCCGGGT  1620
1621  AAAAAAACCA  TCCTGAGGTG  TGCTGTCAAT  CAAAGACAAG  TTGTCATCGC  ACTTACTGGG  1680
1681  GGGGAACTTG  TATATTTTGA  AATGGATCAG  TCAGGACAAC  TGAATGAATA  CACGGAACGT  1740
1741  AAAGAGATGA  ACAGCGAGGT  TGTGTGCATG  GATTTATCAA  AAGTTCCTCC  AACGGAACAA  1800
1801  AGAACGCGAT  TTCTTGCTGT  CGGGTTGGCT  GATAATACTG  TCCGTATTAT  ATCTCTTGAC  1860
1861  CCAACTGATT  GTTTGCAACC  TCTGAGCATG  CAAGCTCTTC  CTGCAACTCC  GGAGTCGGTT  1920
1921  TGCATCATTG  AAATCGGAGG  AGGAGAGGAT  GAAACAGGAG  CACAGAAAGC  ATCCGGAGGA  1980
1981  TTGGTCCTCA  ACATTGGGTT  GCAGAACGGG  GTTTTGCTTC  GAACAACGCT  TGATAATGTG  2040
2041  ACAGGAGATC  TCTCGGACAC  ACGAACACGA  TATCTTGGAA  CACGGGCAGT  CAAACTGTTT  2100
2101  CGTGTATTGA  CACAGGGTTC  AGATGCAGTA  TTAGCAATGT  CCAGCAGAAC  ATGGTTAAGT  2160
2161  TATCAACATC  AGAACAGGTT  CCATCTCACA  CCACTATCTT  ATGAAAGCTT  GGAGTTTGCA  2220
2221  TCAGGATTCG  CATCAGAGCA  ATGTCCAGAA  GGAATTGTTG  CAATATCTGC  CAACACCCTC  2280
2281  AGGATTTTAG  CATTGGAGAA  GTTGGGCACC  GTGTTCAACC  AAGCGTCCAC  AGGACTTCAA  2340
2341  TACACGCCAC  GTAGATTTGC  AATACATTAC  GACTCGGGTA  ATGTCATTAT  ACTTGAGACC  2400
2401  GATCATAATG  CTTACACAGA  AGAAACCAAG  GAGAACAGAA  AACAACAAAT  GGCAGAAGAA  2460
2461  ATGATAGAGG  CAGCAGGTGA  GGATGAGAGA  GAACTCGCTG  CTGAGATGAC  CGCAGCTTTC  2520
2521  CTCCGTGAGA  GTCTTCCGGA  GGATAAGTTC  GGAGCATCAA  AAGCTGGTCC  TGGGATGTGG  2580
2581  TCATCTCAGA  TCCGTCTCAT  GCATCCAAGA  TCTGGTGAAA  CAATTCAAAA  AATTTGTCTG  2640
2641  GAGCAAAACG  AAGCAGCGTT  GAGCATTGCT  ATTTGTAAGT  TTCCCAACAA  CAGTGACGAC  2700
2701  ACGTTTGTGT  TGGTTGGCGT  GGCTTGCGAA  CTCCTTATCA  ACCCACGACA  AGCAAGGGGG  2760
2761  GGAGGGGAGA  TACATACTTA  TAAAATAAAT  GAAGAAGGAA  ATAAACTGGA  ACTCGTGCAT  2820
2821  AAGACAGTAG  TTGACGAGGT  GCCGAGCGCA  ATTTGTCCGT  ATCAAGGTCG  TGTCCTCATC  2880
2881  GGGGTTGGAA  AGTTGCTTCG  AATCTATGAT  CTTGGGAAGA  AGAAGTTGTT  GAGGAAGTGT  2940
2941  GAGAATAAGC  ACATCCCTAA  CTACATAGCC  AGCATTCAAG  CTGTTGGTCA  TCGTATCATT  3000
3001  GTGTGCGATG  TACAGGAGTC  TGTGCATTGG  GTGAGATATC  GAAGACATGA  AAACCAACTT  3060
3061  GTGGTGTTTG  CGGACGATAC  TTACCCACGA  TGGGTCACGT  CAGCTACTGT  GTTGGATTGG  3120
3121  AACACAGTGG  CTGTGTCCGA  TAAGTTTGGA  AATATATCTG  TGCTGCGTCT  TCCATCTGAT  3180
3181  GTCAACGATG  ACGTTCAAGA  TGATCCCAGC  GGAACCAAAG  CTTTGTGGAC  GAGAGGAATT  3240
3241  CTTAACGGAG  CAATGCAGAA  GTGTGAGGTG  CTATGCATGT  ACCATGTTGG  GGAAACAGTT  3300
3301  CTATCACTAC  AGAAGACCAC  CCTCATACCT  GGAGGTTCAG  AATCCCTCGT  ATACACCACA  3360
3361  TTATCGGGTA  GTATTGGTAT  GTTGGTGCCA  TTCACATCAC  ATGAGGATCA  TGATTTCTTC  3420
3421  CAGCATTTAG  AAATGCACAT  GAGAAATGAA  TGTCCACCAT  TATTGGGGAG  AGACCATCTT  3480
3481  GCTTATAGAT  CATATTACTT  TCCTGTCAAG  AATGTTATTG  ATGGTGATTT  GTGTGAACTC  3540
3541  TTCAATTCAA  TGGAGGCTTC  AAAACAAAAA  TCTGTAGCTG  AGGAATTAGA  CAGAGTCCCA  3600
3601  TCTGAGGTGT  CGAAAAAACT  TGAAGACATT  CGTACAAGAT  ATGCGTTCTG  A  3651

▼ ORTHOLOGY

DrLLPS IDOrganismIdentityE-valueScore
LLPS-Cis-0474Ciona savignyi91.180.0 781
LLPS-Ten-0282Tetraodon nigroviridis86.155e-70 236
LLPS-Poa-0155Pongo abelii83.584e-62 236
LLPS-Tag-3330Taeniopygia guttata80.720.02051
LLPS-Meg-1765Meleagris gallopavo80.710.02053
LLPS-Gaga-2873Gallus gallus80.710.02053
LLPS-Sus-2924Sus scrofa80.620.02056
LLPS-Mup-0474Mustela putorius furo80.620.02056
LLPS-Fec-3726Felis catus80.620.02056
LLPS-Urm-0447Ursus maritimus80.620.02056
LLPS-Loa-1541Loxodonta africana80.620.02056
LLPS-Eqc-0135Equus caballus80.620.02056
LLPS-Caf-0721Canis familiaris80.620.02056
LLPS-Chs-1316Chlorocebus sabaeus80.540.02054
LLPS-Ora-1679Ornithorhynchus anatinus80.540.02055
LLPS-Maf-1431Macaca fascicularis80.540.02054
LLPS-Cea-2204Cercocebus atys80.540.02054
LLPS-Sah-1641Sarcophilus harrisii80.540.02055
LLPS-Aon-3830Aotus nancymaae80.540.02054
LLPS-Gog-2506Gorilla gorilla80.540.02054
LLPS-Caj-0555Callithrix jacchus80.540.02052
LLPS-Fud-1907Fukomys damarensis80.540.02054
LLPS-Bot-3368Bos taurus80.540.02054
LLPS-Dio-0075Dipodomys ordii80.540.02054
LLPS-Myl-0472Myotis lucifugus80.540.02048
LLPS-Paa-0072Papio anubis80.540.02054
LLPS-Pap-1856Pan paniscus80.540.02054
LLPS-Pat-1052Pan troglodytes80.540.02054
LLPS-Hos-1008Homo sapiens80.540.02054
LLPS-Man-1938Macaca nemestrina80.540.02054
LLPS-Rhb-0525Rhinopithecus bieti80.540.02054
LLPS-Fia-2204Ficedula albicollis80.540.02052
LLPS-Mam-0516Macaca mulatta80.540.02054
LLPS-Cas-2431Carlito syrichta80.540.02054
LLPS-Ict-0882Ictidomys tridecemlineatus80.540.02054
LLPS-Anc-1674Anolis carolinensis80.540.02050
LLPS-Anp-3360Anas platyrhynchos80.510.01641
LLPS-Mum-1674Mus musculus80.460.02052
LLPS-Ran-0573Rattus norvegicus80.460.02052
LLPS-Ova-1485Ovis aries80.430.02049
LLPS-Aim-0449Ailuropoda melanoleuca80.430.02050
LLPS-Otg-0520Otolemur garnettii80.260.02047
LLPS-Pes-0841Pelodiscus sinensis80.240.01823
LLPS-Tut-1843Tursiops truncatus79.970.02027
LLPS-Xet-1651Xenopus tropicalis79.890.02037
LLPS-Scm-0070Scophthalmus maximus79.80.02040
LLPS-Orn-2153Oreochromis niloticus79.80.02041
LLPS-Leo-2328Lepisosteus oculatus79.740.02035
LLPS-Scf-2720Scleropages formosus79.720.02038
LLPS-Xim-0185Xiphophorus maculatus79.560.02041
LLPS-Dar-2092Danio rerio79.560.02034
LLPS-Cap-1423Cavia porcellus79.560.02009
LLPS-Gaa-0521Gasterosteus aculeatus79.490.02030
LLPS-Orl-0421Oryzias latipes79.470.02035
LLPS-Nol-1952Nomascus leucogenys79.410.02006
LLPS-Pof-2211Poecilia formosa79.390.02040
LLPS-Icp-0233Ictalurus punctatus79.310.02031
LLPS-Asm-2644Astyanax mexicanus79.310.02030
LLPS-Mal-0628Mandrillus leucophaeus77.670.01957
LLPS-Lac-1002Latimeria chalumnae77.010.01927
LLPS-Mod-1516Monodelphis domestica76.780.01939
LLPS-Drm-0524Drosophila melanogaster71.910.01873
LLPS-Tar-0068Takifugu rubripes69.170.0 829
LLPS-Mea-0738Mesocricetus auratus66.670.01010
LLPS-Vir-0047Vigna radiata61.10.0 984
LLPS-Cae-1244Caenorhabditis elegans58.670.01486
LLPS-Php-0645Physcomitrella patens58.270.01466
LLPS-Amt-0000Amborella trichopoda57.150.01431
LLPS-Nia-1315Nicotiana attenuata57.010.01426
LLPS-Sol-0073Solanum lycopersicum56.80.01367
LLPS-Sot-1442Solanum tuberosum56.770.01422
LLPS-Sem-0296Selaginella moellendorffii56.710.01416
LLPS-Via-0739Vigna angularis56.440.01408
LLPS-Cus-0321Cucumis sativus56.310.01408
LLPS-Gor-1604Gossypium raimondii56.30.01403
LLPS-Coc-0822Corchorus capsularis56.270.01404
LLPS-Glm-1872Glycine max56.230.01402
LLPS-Phv-0770Phaseolus vulgaris56.190.01398
LLPS-Prp-0380Prunus persica56.150.01407
LLPS-Dac-0561Daucus carota55.870.01400
LLPS-Viv-0558Vitis vinifera55.860.01407
LLPS-Hea-1089Helianthus annuus55.770.01399
LLPS-Thc-1625Theobroma cacao55.70.01400
LLPS-Pot-1826Populus trichocarpa55.610.01408
LLPS-Bro-0961Brassica oleracea55.370.01398
LLPS-Mae-0949Manihot esculenta55.340.01408
LLPS-Brr-1033Brassica rapa55.210.01394
LLPS-Sob-1815Sorghum bicolor54.960.01382
LLPS-Met-2304Medicago truncatula54.920.01353
LLPS-Zem-1496Zea mays54.870.01380
LLPS-Orb-0613Oryza barthii54.830.01373
LLPS-Orni-0114Oryza nivara54.830.01373
LLPS-Orgl-0310Oryza glumaepatula54.830.01372
LLPS-Orr-0050Oryza rufipogon54.830.01373
LLPS-Orm-0352Oryza meridionalis54.830.01373
LLPS-Org-1153Oryza glaberrima54.830.01373
LLPS-Ori-0783Oryza indica54.750.01372
LLPS-Lep-0314Leersia perrieri54.730.01375
LLPS-Sei-0729Setaria italica54.730.01374
LLPS-Art-0007Arabidopsis thaliana54.560.01384
LLPS-Tra-2470Triticum aestivum54.540.01365
LLPS-Hov-0302Hordeum vulgare54.540.01368
LLPS-Abg-0620Absidia glauca54.440.01377
LLPS-Brd-1474Brachypodium distachyon54.270.01365
LLPS-Orbr-0747Oryza brachyantha54.270.01348
LLPS-Brn-0791Brassica napus53.50.01337
LLPS-Put-0957Puccinia triticina52.673e-39 163
LLPS-Fuv-1068Fusarium verticillioides52.120.0 826
LLPS-Ors-1379Oryza sativa51.920.0 889
LLPS-Miv-0771Microbotryum violaceum51.880.01290
LLPS-Pug-0863Puccinia graminis51.660.01263
LLPS-Mel-1021Melampsora laricipopulina51.540.01276
LLPS-Chr-0698Chlamydomonas reinhardtii51.380.01262
LLPS-Orp-0879Oryza punctata51.250.01231
LLPS-Osl-0018Ostreococcus lucimarinus51.110.01278
LLPS-Tum-0291Tuber melanosporum50.740.01249
LLPS-Tru-1187Triticum urartu50.420.01047
LLPS-Spr-0248Sporisorium reilianum50.410.01252
LLPS-Usm-0745Ustilago maydis50.240.01245
LLPS-Mua-0633Musa acuminata50.06e-124 413
LLPS-Nef-1183Neosartorya fischeri49.920.01228
LLPS-Asc-0869Aspergillus clavatus49.590.01231
LLPS-Asfu-0670Aspergillus fumigatus49.510.01215
LLPS-Ast-0372Aspergillus terreus49.140.01209
LLPS-Asn-0171Aspergillus nidulans49.030.01217
LLPS-Scs-0575Sclerotinia sclerotiorum48.910.01107
LLPS-Asni-0132Aspergillus niger48.870.01218
LLPS-Cog-0890Colletotrichum gloeosporioides48.620.01194
LLPS-Cogr-0597Colletotrichum graminicola48.620.01193
LLPS-Blg-0191Blumeria graminis48.580.01206
LLPS-Aso-0995Aspergillus oryzae48.460.01207
LLPS-Asf-0621Aspergillus flavus48.340.01209
LLPS-Nec-0857Neurospora crassa48.30.01187
LLPS-Coo-0875Colletotrichum orbiculare47.980.01186
LLPS-Mao-0631Magnaporthe oryzae47.980.01174
LLPS-Trv-0299Trichoderma virens47.90.01190
LLPS-Trr-0561Trichoderma reesei47.860.01189
LLPS-Gag-0619Gaeumannomyces graminis47.660.01165
LLPS-Crn-1577Cryptococcus neoformans47.530.01159
LLPS-Map-0045Magnaporthe poae47.420.01162
LLPS-Fuo-1287Fusarium oxysporum47.320.01153
LLPS-Ved-1493Verticillium dahliae47.210.01175
LLPS-Arl-0615Arabidopsis lyrata46.810.0 599
LLPS-Fus-0989Fusarium solani46.60.01159
LLPS-Beb-0709Beauveria bassiana46.440.01159
LLPS-Scp-1108Schizosaccharomyces pombe44.420.01023
LLPS-Scc-0287Schizosaccharomyces cryophilus43.650.01026
LLPS-Scj-0971Schizosaccharomyces japonicus41.750.0 957
LLPS-Lem-0254Leptosphaeria maculans39.090.0 922
LLPS-Pyt-0265Pyrenophora teres38.610.0 920
LLPS-Gas-0034Galdieria sulphuraria38.460.0 827
LLPS-Pytr-0201Pyrenophora triticirepentis38.320.0 905
LLPS-Phn-0445Phaeosphaeria nodorum38.30.0 903
LLPS-Dos-1229Dothistroma septosporum36.850.0 802
LLPS-Zyt-1136Zymoseptoria tritici36.540.0 804
LLPS-Kop-0864Komagataella pastoris35.640.0 715
LLPS-Yal-1298Yarrowia lipolytica32.542e-114 391
LLPS-Chc-0609Chondrus crispus32.530.0 599
LLPS-Asg-1150Ashbya gossypii26.645e-121 412
LLPS-Sac-1111Saccharomyces cerevisiae24.323e-84 305
LLPS-Orc-4257Oryctolagus cuniculus22.76e-51 201