DrLLPS - Data resource of LLPS

LLPS-Chs-1785
PABPN1

Integrated Annotations

▼ OVERVIEW


Status:	Unreviewed
Protein Name:	Uncharacterized protein
Gene Name:	PABPN1
Ensembl Gene:	ENSCSAG00000016036.1
Ensembl Protein:	ENSCSAP00000012101.1
Organism:	Chlorocebus sabaeus
Taxa ID:	60711
LLPS Type:	LLPS regulator

▼ PROPERTY

——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:

Condensate	Evidence	Orthologs
Nuclear speckle, Paraspeckle	Predicted from orthologs	(View)

Organism	DrLLPS ID	UniProt ID	LLPS type	Condensate	Identity	E-value	Score
Homo sapiens	LLPS-Hos-1913	Q86U42	Regulator	Nuclear speckle, Paraspeckle	98.45	2e-109	327
Mus musculus	LLPS-Mum-0688	D3Z5F7	Regulator	Nuclear speckle, Paraspeckle	100.00	0.0	802

▼ CROSS REFERENCE

Database	Nucleotide ID	Protein ID
Ensembl	ENSCSAT00000014122.1	ENSCSAP00000012101.1
UniProt		A0A0D9RU12, A0A0D9RU12_CHLSB
GeneBank	AQIB01128616
RefSeq	XM_007990849.1	XP_007989040.1

▼ SEQUENCE

Protein Sequence (FASTA)
1 MAAAAAAAAA AGAAGGRGSG PGRRRHLVPG AGGEAGEGAP GGAGDYGNGL ESEELEPEEL 60 61 LLEPQPEPEP EEEPPRPRAP PGAPGPGPGS GGPGSQEEEE EPGLVEGDPG DGAIEDPELE 120 121 VIKARVREME EEAEKLKELQ NEVEKQMNMS PPPGNAGPVI MSIEEKMEAD ARSIYVGNVD 180 181 YGATAEELEA HFHGCGSVNR VTILCDKFSG HPKGFAYIEF SDKEPMRTSL ALDESLFRGR 240 241 QIKVIPKRTN RPGISTTDRG FPRARYRART TNYNSSRSRF YSGFNSRPRG RVYRGRARAT 300 301 SWYSPY 306
Nucleotide CDS Sequence (FASTA)
1 ATGGCGGCGG CGGCGGCGGC GGCAGCAGCA GCGGGGGCTG CGGGCGGTCG GGGCTCCGGG 60 61 CCGGGGCGGC GGCGCCATCT TGTGCCCGGG GCCGGTGGGG AGGCCGGGGA GGGGGCCCCG 120 121 GGGGGCGCAG GGGACTACGG GAACGGCCTG GAGTCTGAGG AACTGGAGCC TGAGGAGCTG 180 181 CTGCTGGAGC CCCAGCCGGA GCCCGAGCCC GAAGAGGAGC CGCCCCGGCC CCGCGCCCCC 240 241 CCGGGAGCTC CGGGCCCTGG GCCTGGTTCG GGAGGCCCCG GCAGCCAAGA GGAGGAGGAG 300 301 GAGCCGGGAC TGGTCGAGGG TGACCCGGGG GACGGCGCCA TTGAGGACCC GGAGCTGGAA 360 361 GTTATCAAAG CTCGAGTCAG GGAGATGGAG GAAGAAGCTG AGAAGCTAAA GGAGCTACAG 420 421 AACGAGGTAG AGAAGCAGAT GAATATGAGT CCACCTCCAG GCAATGCTGG CCCAGTGATC 480 481 ATGTCCATTG AGGAGAAGAT GGAGGCTGAT GCCCGTTCCA TCTATGTTGG CAATGTGGAC 540 541 TATGGTGCAA CAGCAGAAGA GCTGGAAGCT CACTTTCATG GCTGTGGATC AGTCAACCGT 600 601 GTTACCATAC TCTGTGACAA ATTTAGTGGC CATCCCAAAG GGTTTGCGTA TATAGAGTTC 660 661 TCAGACAAAG AGCCAATGAG GACTTCCTTG GCCTTAGATG AGTCCCTATT TAGAGGAAGG 720 721 CAAATCAAGG TGATCCCAAA ACGAACCAAC AGACCAGGCA TCAGCACAAC AGACCGGGGT 780 781 TTTCCACGAG CCCGCTACCG CGCCCGGACC ACCAACTACA ACAGTTCCCG CTCTCGATTC 840 841 TACAGTGGTT TTAACAGCAG GCCCCGGGGT CGTGTCTACA GGGGCCGGGC TAGAGCGACA 900 901 TCATGGTATT CCCCTTACTA A 921

▼ ORTHOLOGY

DrLLPS ID	Organism	Identity	E-value	Score
LLPS-Ict-0342	Ictidomys tridecemlineatus	98.78	4e-103	306
LLPS-Mup-2613	Mustela putorius furo	98.61	1e-99	297
LLPS-Caf-2960	Canis familiaris	98.45	4e-109	326
LLPS-Otg-0436	Otolemur garnettii	98.45	2e-109	327
LLPS-Fec-0608	Felis catus	98.45	2e-109	327
LLPS-Hos-1913	Homo sapiens	98.45	2e-109	327
LLPS-Bot-4173	Bos taurus	98.45	1e-109	328
LLPS-Aim-0416	Ailuropoda melanoleuca	98.41	1e-107	318
LLPS-Poa-0165	Pongo abelii	98.28	1e-105	317
LLPS-Loa-3114	Loxodonta africana	98.01	1e-91	276
LLPS-Cap-0983	Cavia porcellus	97.94	4e-109	326
LLPS-Eqc-3423	Equus caballus	97.92	4e-106	319
LLPS-Fud-2800	Fukomys damarensis	97.56	1e-102	305
LLPS-Orc-3527	Oryctolagus cuniculus	97.42	5e-109	326
LLPS-Ran-3532	Rattus norvegicus	97.42	6e-109	326
LLPS-Dio-0936	Dipodomys ordii	97.42	3e-108	324
LLPS-Caj-3943	Callithrix jacchus	96.95	1e-99	298
LLPS-Mum-0688	Mus musculus	96.83	8e-105	316
LLPS-Myl-0257	Myotis lucifugus	96.3	1e-106	315
LLPS-Sah-3226	Sarcophilus harrisii	95.77	8e-96	289
LLPS-Mod-3827	Monodelphis domestica	95.29	2e-95	291
LLPS-Ora-1813	Ornithorhynchus anatinus	95.21	7e-86	261
LLPS-Lac-2818	Latimeria chalumnae	91.61	9e-84	259
LLPS-Maf-1214	Macaca fascicularis	91.49	4e-77	238
LLPS-Anc-3502	Anolis carolinensis	91.05	1e-98	299
LLPS-Gaa-1002	Gasterosteus aculeatus	90.0	4e-77	244
LLPS-Xet-1948	Xenopus tropicalis	89.64	3e-86	268
LLPS-Man-0996	Macaca nemestrina	89.26	1e-77	244
LLPS-Mal-0598	Mandrillus leucophaeus	87.25	4e-73	233
LLPS-Leo-1064	Lepisosteus oculatus	87.21	2e-88	273
LLPS-Ere-0114	Erinaceus europaeus	87.11	2e-100	304
LLPS-Dar-1988	Danio rerio	86.63	3e-87	270
LLPS-Rhb-4003	Rhinopithecus bieti	86.6	2e-88	273
LLPS-Ten-2342	Tetraodon nigroviridis	86.13	9e-89	271
LLPS-Icp-2823	Ictalurus punctatus	86.05	2e-86	267
LLPS-Gog-0032	Gorilla gorilla	85.57	8e-85	263
LLPS-Tar-1628	Takifugu rubripes	85.55	3e-87	270
LLPS-Asm-3993	Astyanax mexicanus	85.55	7e-86	266
LLPS-Orl-0128	Oryzias latipes	85.55	7e-87	269
LLPS-Pes-2022	Pelodiscus sinensis	85.47	1e-64	206
LLPS-Orn-0475	Oreochromis niloticus	84.97	1e-85	265
LLPS-Scm-1434	Scophthalmus maximus	84.97	9e-86	266
LLPS-Scf-0102	Scleropages formosus	82.56	7e-89	272
LLPS-Mam-2776	Macaca mulatta	81.96	5e-81	254
LLPS-Pat-2330	Pan troglodytes	81.96	1e-81	255
LLPS-Paa-4706	Papio anubis	81.96	3e-81	254
LLPS-Pap-4398	Pan paniscus	81.71	1e-75	236
LLPS-Xim-0295	Xiphophorus maculatus	81.61	7e-78	246
LLPS-Pof-1321	Poecilia formosa	80.92	8e-77	243
LLPS-Nol-0606	Nomascus leucogenys	78.35	2e-74	236
LLPS-Cae-0779	Caenorhabditis elegans	76.04	7e-48	165
LLPS-Aon-3383	Aotus nancymaae	73.62	7e-60	195
LLPS-Gas-0176	Galdieria sulphuraria	70.33	3e-39	142
LLPS-Drm-0647	Drosophila melanogaster	68.83	1e-58	194
LLPS-Sus-4501	Sus scrofa	67.88	4e-72	230
LLPS-Cis-0822	Ciona savignyi	66.38	5e-51	172
LLPS-Usm-0715	Ustilago maydis	66.3	1e-38	141
LLPS-Spr-1390	Sporisorium reilianum	66.3	7e-39	142
LLPS-Anp-3304	Anas platyrhynchos	66.12	9e-40	141
LLPS-Aso-1056	Aspergillus oryzae	65.22	1e-37	138
LLPS-Asfu-1627	Aspergillus fumigatus	63.44	7e-37	137
LLPS-Nef-1412	Neosartorya fischeri	63.44	2e-37	137
LLPS-Cii-0349	Ciona intestinalis	63.35	2e-56	188
LLPS-Yal-0939	Yarrowia lipolytica	63.33	9e-33	125
LLPS-Dos-1332	Dothistroma septosporum	63.04	2e-35	134
LLPS-Pug-0969	Puccinia graminis	63.04	2e-44	156
LLPS-Tum-1486	Tuber melanosporum	63.04	1e-36	135
LLPS-Zyt-0535	Zymoseptoria tritici	63.04	4e-36	134
LLPS-Asni-1159	Aspergillus niger	63.04	5e-37	136
LLPS-Asc-1002	Aspergillus clavatus	63.04	7e-37	136
LLPS-Art-1653	Arabidopsis thaliana	62.77	3e-30	120
LLPS-Scp-0443	Schizosaccharomyces pombe	62.64	3e-33	125
LLPS-Asn-0871	Aspergillus nidulans	62.37	6e-37	136
LLPS-Put-0998	Puccinia triticina	62.32	1e-43	154
LLPS-Fia-0294	Ficedula albicollis	62.18	7e-53	179
LLPS-Scc-1478	Schizosaccharomyces cryophilus	61.63	7e-32	122
LLPS-Mel-1207	Melampsora laricipopulina	61.59	3e-41	146
LLPS-Pyt-0823	Pyrenophora teres	61.11	4e-33	126
LLPS-Zem-0308	Zea mays	61.04	2e-23	101
LLPS-Ved-1530	Verticillium dahliae	60.92	1e-32	125
LLPS-Trv-1568	Trichoderma virens	60.87	1e-34	129
LLPS-Trr-1118	Trichoderma reesei	60.87	1e-34	129
LLPS-Fus-1443	Fusarium solani	60.87	2e-34	129
LLPS-Nec-1041	Neurospora crassa	60.87	2e-34	130
LLPS-Chr-1492	Chlamydomonas reinhardtii	60.44	4e-28	114
LLPS-Mao-1319	Magnaporthe oryzae	60.0	4e-35	132
LLPS-Phn-0070	Phaeosphaeria nodorum	59.78	3e-34	130
LLPS-Pytr-0914	Pyrenophora triticirepentis	59.78	3e-33	127
LLPS-Miv-0106	Microbotryum violaceum	59.78	5e-32	124
LLPS-Map-1001	Magnaporthe poae	59.78	6e-34	129
LLPS-Gag-0018	Gaeumannomyces graminis	59.78	7e-34	128
LLPS-Crn-0271	Cryptococcus neoformans	59.55	3e-35	132
LLPS-Hov-1303	Hordeum vulgare	59.41	1e-31	122
LLPS-Kop-0084	Komagataella pastoris	59.18	1e-33	128
LLPS-Blg-0733	Blumeria graminis	59.09	2e-33	127
LLPS-Gaga-3039	Gallus gallus	58.9	7e-50	169
LLPS-Coo-1147	Colletotrichum orbiculare	58.89	7e-32	123
LLPS-Fuo-0582	Fusarium oxysporum	58.7	9e-33	125
LLPS-Fuv-0221	Fusarium verticillioides	58.7	9e-33	125
LLPS-Cog-1321	Colletotrichum gloeosporioides	57.89	1e-35	134
LLPS-Abg-0375	Absidia glauca	57.75	6e-39	145
LLPS-Scs-1098	Sclerotinia sclerotiorum	57.5	2e-27	110
LLPS-Brr-0892	Brassica rapa	55.47	3e-33	127
LLPS-Pot-1161	Populus trichocarpa	55.47	9e-35	131
LLPS-Brn-2021	Brassica napus	55.47	3e-33	127
LLPS-Org-1615	Oryza glaberrima	55.07	8e-36	134
LLPS-Orr-1898	Oryza rufipogon	55.07	8e-36	134
LLPS-Ors-0555	Oryza sativa	55.07	8e-36	134
LLPS-Orp-0883	Oryza punctata	55.07	1e-35	134
LLPS-Orgl-0024	Oryza glumaepatula	55.07	8e-36	134
LLPS-Ori-0750	Oryza indica	55.07	8e-36	134
LLPS-Orb-1972	Oryza barthii	55.07	8e-36	134
LLPS-Orbr-1176	Oryza brachyantha	54.79	2e-32	125
LLPS-Arl-2591	Arabidopsis lyrata	54.74	7e-32	124
LLPS-Lep-0731	Leersia perrieri	54.74	4e-35	133
LLPS-Prp-1962	Prunus persica	54.35	2e-33	128
LLPS-Nia-0809	Nicotiana attenuata	54.35	1e-32	125
LLPS-Vir-0905	Vigna radiata	54.35	8e-34	129
LLPS-Bro-2170	Brassica oleracea	54.01	9e-31	121
LLPS-Brd-2091	Brachypodium distachyon	54.01	4e-31	121
LLPS-Met-1263	Medicago truncatula	54.01	1e-33	128
LLPS-Via-1789	Vigna angularis	54.01	4e-32	124
LLPS-Sot-1768	Solanum tuberosum	54.01	3e-34	130
LLPS-Mua-0614	Musa acuminata	54.01	1e-32	125
LLPS-Phv-2320	Phaseolus vulgaris	53.62	1e-32	125
LLPS-Dac-2365	Daucus carota	53.55	4e-34	129
LLPS-Orm-1493	Oryza meridionalis	53.42	3e-32	124
LLPS-Orni-0503	Oryza nivara	53.42	3e-32	124
LLPS-Tra-0024	Triticum aestivum	53.1	2e-32	125
LLPS-Sei-0972	Setaria italica	52.9	6e-33	126
LLPS-Tru-0975	Triticum urartu	52.74	1e-31	122
LLPS-Sem-1800	Selaginella moellendorffii	52.55	2e-30	119
LLPS-Thc-2368	Theobroma cacao	52.52	4e-33	127
LLPS-Cus-0149	Cucumis sativus	52.26	4e-34	129
LLPS-Sob-0775	Sorghum bicolor	52.17	1e-32	125
LLPS-Ast-0643	Aspergillus terreus	52.17	1e-22	97.4
LLPS-Mae-1939	Manihot esculenta	51.8	6e-32	124
LLPS-Glm-2041	Glycine max	51.61	2e-34	130
LLPS-Php-2527	Physcomitrella patens	51.35	7e-30	118
LLPS-Lem-0019	Leptosphaeria maculans	51.09	2e-23	99.8
LLPS-Amt-1756	Amborella trichopoda	50.65	5e-32	124
LLPS-Gor-0969	Gossypium raimondii	49.69	2e-33	128
LLPS-Viv-0313	Vitis vinifera	49.52	6e-26	106
LLPS-Hea-1777	Helianthus annuus	48.82	5e-33	127
LLPS-Sol-0323	Solanum lycopersicum	48.77	1e-32	125
LLPS-Osl-0772	Ostreococcus lucimarinus	47.86	6e-25	102
LLPS-Coc-0108	Corchorus capsularis	47.1	2e-29	116
LLPS-Scj-0883	Schizosaccharomyces japonicus	45.77	8e-31	119
LLPS-Cogr-0744	Colletotrichum graminicola	38.89	5e-10	63.9
LLPS-Cea-1477	Cercocebus atys	38.16	4e-10	64.3
LLPS-Urm-0729	Ursus maritimus	35.53	2e-09	62.4
LLPS-Ova-1826	Ovis aries	35.53	2e-09	62.4
LLPS-Meg-0397	Meleagris gallopavo	32.46	5e-10	63.9
LLPS-Cas-0041	Carlito syrichta	29.82	4e-10	64.3

LLPS-Chs-1785PABPN1

Protein Sequence

Nucleotide Sequence

LLPS-Chs-1785
PABPN1