LLPS-Chc-0045
CHC_T00010264001
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | DEAD (Asp-Glu-Ala-Asp) box polypeptide |
| Gene Name: | CHC_T00010264001 |
| Ensembl Gene: | CHC_T00010264001 |
| Ensembl Protein: | CDF36593 |
| Organism: | Chondrus crispus |
| Taxa ID: | 2769 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | CDF36593 | CDF36593 |
| UniProt | R7QFR3, R7QFR3_CHOCR | |
| GeneBank | HG001791 | CDF36593.1 |
| RefSeq | XM_005716355.1 | XP_005716412.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MVDDPLRALL RGCHGAAVAS WKSKSAASAR AELIRTPSSA ALSRELDFFG TSSKRLEVTD 60 61 KAQSSSPGRN NVKSVAPTSA DMSAAVASPT LEAALAHMGI VSPTAVQRRA IPAMRAGNDV 120 121 VAVAPTGSGK TLAYAVPLLS ELLSGSRAQH RSAPHALVLA PTRELAEQIG RVFTRLSSEA 180 181 RVNARIKIVC SKAAAAGLKA ADGLIDIVIA TPMRLVATHQ AGAINLGRVA HVVLDEADEL 240 241 FAGNFLEQVD DVLASCGSQL KDGTRVHMFS ATFPPAIETL AQGLLKKQKK IVIDGGAYGG 300 301 SAAVGGVAAR IEQKFMFVGG RGEQGKVMAV RGLLKEGLRA PILLFVQTKD RAAELYRELV 360 361 YDGVKVEAIH ADRSQQARMR AVERFRTGEV WVLIATDVLA RGLDFLAVES VVNYDMPSSA 420 421 SAYVHRIGRT GRNGRKGTAV TLFTEEDRVL LGPVLKVAKV SGADVPEWAL KLKGVRKDVV 480 481 RRMEKRPPTR KRIGGPNRGS IGKRHKKEKR LESRSRTEKG EADSESTSDG KKRNSATKGK 540 541 QTRRKKRGAS DGLNVATSLE EEEYE 565 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGTAGATG ACCCGCTTCG GGCACTTCTC CGCGGATGTC ATGGCGCTGC AGTAGCAAGT 60 61 TGGAAATCGA AGTCAGCCGC ATCCGCCAGG GCTGAGCTTA TACGAACGCC GTCCTCAGCA 120 121 GCGCTCTCTC GCGAGCTTGA CTTCTTCGGG ACTTCCTCGA AGAGACTGGA AGTCACGGAC 180 181 AAAGCTCAAT CCAGTTCACC AGGGCGAAAC AATGTCAAAT CTGTCGCGCC CACGTCCGCT 240 241 GACATGTCTG CAGCTGTGGC CAGTCCCACC TTGGAAGCTG CTCTAGCTCA CATGGGTATT 300 301 GTGTCTCCCA CAGCCGTACA ACGCCGTGCG ATTCCCGCCA TGCGTGCCGG TAACGATGTG 360 361 GTGGCGGTGG CGCCTACAGG GTCTGGTAAG ACGCTTGCTT ATGCCGTTCC TTTACTTTCA 420 421 GAGTTACTGT CCGGGAGTCG GGCGCAACAT CGTTCAGCCC CACATGCGTT GGTGCTAGCC 480 481 CCAACAAGAG AGCTTGCAGA GCAGATTGGT CGCGTTTTTA CGAGGCTTTC TTCAGAGGCA 540 541 CGGGTGAATG CGCGGATAAA GATTGTTTGC TCGAAGGCCG CTGCTGCCGG CCTCAAGGCT 600 601 GCTGATGGGT TAATTGATAT TGTGATTGCG ACCCCAATGA GGCTTGTGGC CACCCACCAA 660 661 GCTGGTGCAA TTAACCTTGG GCGCGTGGCC CATGTCGTTC TGGACGAGGC AGACGAGCTT 720 721 TTCGCAGGAA ATTTTCTCGA GCAAGTTGAT GACGTCTTAG CTTCATGTGG ATCACAACTT 780 781 AAGGATGGAA CGAGGGTGCA TATGTTTTCA GCCACTTTTC CTCCCGCAAT AGAAACGTTG 840 841 GCACAAGGGC TGTTGAAGAA ACAAAAGAAG ATCGTTATTG ACGGTGGGGC TTATGGAGGT 900 901 TCTGCTGCCG TTGGAGGGGT TGCGGCGAGG ATCGAACAAA AGTTTATGTT TGTCGGTGGT 960 961 AGGGGAGAAC AAGGGAAGGT CATGGCCGTG CGGGGTTTGC TCAAAGAGGG CTTGAGAGCG 1020 1021 CCGATACTTT TGTTCGTGCA AACGAAGGAC CGAGCTGCTG AGTTGTACCG AGAATTGGTT 1080 1081 TATGATGGAG TGAAAGTAGA AGCAATTCAT GCTGACCGAA GCCAACAAGC CCGCATGCGC 1140 1141 GCCGTAGAGC GATTTCGAAC AGGCGAAGTG TGGGTTCTAA TCGCAACAGA CGTATTGGCA 1200 1201 CGCGGGTTGG ATTTTCTAGC GGTAGAGAGT GTGGTGAACT ACGACATGCC GAGTAGCGCA 1260 1261 TCGGCATACG TGCATAGAAT CGGAAGAACA GGGAGGAACG GGCGAAAAGG GACGGCAGTG 1320 1321 ACGCTGTTCA CTGAGGAAGA TCGAGTACTG CTAGGTCCTG TTCTGAAAGT GGCAAAGGTG 1380 1381 AGTGGAGCAG ACGTGCCAGA GTGGGCGTTG AAACTGAAAG GCGTGAGAAA AGATGTGGTG 1440 1441 AGGAGAATGG AGAAGAGACC ACCAACGCGG AAGCGAATTG GGGGACCTAA TCGTGGAAGC 1500 1501 ATTGGAAAAC GACACAAAAA GGAAAAGAGG TTGGAGTCGA GGAGTCGGAC TGAGAAGGGT 1560 1561 GAAGCAGATA GCGAATCGAC AAGTGACGGG AAGAAAAGAA ATTCAGCGAC AAAGGGAAAA 1620 1621 CAGACGAGGA GGAAGAAAAG GGGTGCAAGC GATGGTCTTA ACGTTGCTAC CAGTCTTGAA 1680 1681 GAAGAAGAGT ATGAATGA 1698 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Miv-0622 | Microbotryum violaceum | 43.62 | 7e-09 | 62.8 |
| LLPS-Chr-0091 | Chlamydomonas reinhardtii | 42.72 | 2e-86 | 290 |
| LLPS-Osl-0005 | Ostreococcus lucimarinus | 42.34 | 1e-87 | 286 |
| LLPS-Mua-1935 | Musa acuminata | 41.59 | 2e-92 | 300 |
| LLPS-Scm-0845 | Scophthalmus maximus | 41.48 | 1e-86 | 289 |
| LLPS-Mae-0603 | Manihot esculenta | 41.41 | 5e-88 | 288 |
| LLPS-Tra-0108 | Triticum aestivum | 41.27 | 4e-87 | 286 |
| LLPS-Sot-1074 | Solanum tuberosum | 41.27 | 1e-83 | 278 |
| LLPS-Orr-0036 | Oryza rufipogon | 41.25 | 1e-87 | 288 |
| LLPS-Ors-0562 | Oryza sativa | 41.25 | 1e-87 | 288 |
| LLPS-Phv-0663 | Phaseolus vulgaris | 41.16 | 2e-87 | 287 |
| LLPS-Orni-0362 | Oryza nivara | 40.99 | 1e-87 | 288 |
| LLPS-Orb-0664 | Oryza barthii | 40.99 | 1e-87 | 288 |
| LLPS-Ori-0025 | Oryza indica | 40.99 | 1e-87 | 288 |
| LLPS-Org-0600 | Oryza glaberrima | 40.99 | 3e-87 | 287 |
| LLPS-Sob-1098 | Sorghum bicolor | 40.99 | 3e-86 | 284 |
| LLPS-Sah-1186 | Sarcophilus harrisii | 40.8 | 2e-79 | 268 |
| LLPS-Eqc-1569 | Equus caballus | 40.8 | 2e-80 | 270 |
| LLPS-Sol-0261 | Solanum lycopersicum | 40.77 | 1e-83 | 277 |
| LLPS-Brd-0181 | Brachypodium distachyon | 40.74 | 2e-85 | 284 |
| LLPS-Orgl-0748 | Oryza glumaepatula | 40.73 | 5e-84 | 284 |
| LLPS-Hea-1484 | Helianthus annuus | 40.72 | 1e-87 | 287 |
| LLPS-Php-0891 | Physcomitrella patens | 40.7 | 4e-86 | 285 |
| LLPS-Ova-1979 | Ovis aries | 40.53 | 9e-79 | 266 |
| LLPS-Mum-0495 | Mus musculus | 40.53 | 7e-79 | 266 |
| LLPS-Ten-2763 | Tetraodon nigroviridis | 40.49 | 4e-86 | 285 |
| LLPS-Zem-0091 | Zea mays | 40.47 | 1e-86 | 285 |
| LLPS-Orm-0545 | Oryza meridionalis | 40.47 | 3e-85 | 281 |
| LLPS-Orp-0017 | Oryza punctata | 40.47 | 5e-86 | 283 |
| LLPS-Xim-0780 | Xiphophorus maculatus | 40.39 | 2e-86 | 288 |
| LLPS-Myl-3512 | Myotis lucifugus | 40.32 | 4e-79 | 264 |
| LLPS-Bot-0143 | Bos taurus | 40.27 | 5e-79 | 266 |
| LLPS-Man-1044 | Macaca nemestrina | 40.27 | 3e-78 | 265 |
| LLPS-Mod-2173 | Monodelphis domestica | 40.2 | 9e-81 | 271 |
| LLPS-Cas-1401 | Carlito syrichta | 40.16 | 3e-78 | 265 |
| LLPS-Coc-1463 | Corchorus capsularis | 40.1 | 1e-84 | 279 |
| LLPS-Ora-1849 | Ornithorhynchus anatinus | 40.05 | 3e-83 | 278 |
| LLPS-Dar-0836 | Danio rerio | 40.05 | 4e-85 | 283 |
| LLPS-Paa-0465 | Papio anubis | 40.0 | 6e-78 | 264 |
| LLPS-Mal-0788 | Mandrillus leucophaeus | 40.0 | 2e-78 | 265 |
| LLPS-Tut-0055 | Tursiops truncatus | 40.0 | 2e-78 | 265 |
| LLPS-Fud-0094 | Fukomys damarensis | 40.0 | 1e-77 | 263 |
| LLPS-Asg-1009 | Ashbya gossypii | 40.0 | 3e-77 | 261 |
| LLPS-Dac-0709 | Daucus carota | 40.0 | 3e-75 | 254 |
| LLPS-Cea-0421 | Cercocebus atys | 40.0 | 4e-78 | 264 |
| LLPS-Maf-0438 | Macaca fascicularis | 40.0 | 4e-78 | 264 |
| LLPS-Chs-0418 | Chlorocebus sabaeus | 40.0 | 2e-78 | 265 |
| LLPS-Nol-0346 | Nomascus leucogenys | 40.0 | 2e-78 | 265 |
| LLPS-Mam-1573 | Macaca mulatta | 40.0 | 4e-78 | 264 |
| LLPS-Sei-0225 | Setaria italica | 39.95 | 3e-86 | 284 |
| LLPS-Tar-0766 | Takifugu rubripes | 39.95 | 2e-84 | 283 |
| LLPS-Brr-2030 | Brassica rapa | 39.95 | 1e-84 | 280 |
| LLPS-Spr-0305 | Sporisorium reilianum | 39.91 | 5e-91 | 299 |
| LLPS-Ran-1730 | Rattus norvegicus | 39.9 | 3e-79 | 267 |
| LLPS-Pof-2058 | Poecilia formosa | 39.9 | 5e-86 | 286 |
| LLPS-Via-1207 | Vigna angularis | 39.85 | 7e-88 | 288 |
| LLPS-Asm-2742 | Astyanax mexicanus | 39.8 | 2e-82 | 276 |
| LLPS-Caj-1778 | Callithrix jacchus | 39.79 | 4e-78 | 264 |
| LLPS-Loa-0968 | Loxodonta africana | 39.78 | 4e-72 | 248 |
| LLPS-Icp-0824 | Ictalurus punctatus | 39.75 | 1e-83 | 279 |
| LLPS-Cap-0046 | Cavia porcellus | 39.73 | 1e-77 | 263 |
| LLPS-Scj-0151 | Schizosaccharomyces japonicus | 39.72 | 4e-85 | 280 |
| LLPS-Mup-0149 | Mustela putorius furo | 39.69 | 5e-80 | 269 |
| LLPS-Lep-1280 | Leersia perrieri | 39.69 | 1e-86 | 285 |
| LLPS-Caf-3286 | Canis familiaris | 39.69 | 4e-80 | 270 |
| LLPS-Brn-1934 | Brassica napus | 39.68 | 2e-83 | 276 |
| LLPS-Art-0488 | Arabidopsis thaliana | 39.58 | 3e-83 | 276 |
| LLPS-Sac-0567 | Saccharomyces cerevisiae | 39.54 | 2e-80 | 269 |
| LLPS-Sem-0280 | Selaginella moellendorffii | 39.46 | 7e-92 | 295 |
| LLPS-Dio-1306 | Dipodomys ordii | 39.44 | 5e-79 | 266 |
| LLPS-Bro-0090 | Brassica oleracea | 39.42 | 1e-83 | 277 |
| LLPS-Amt-0146 | Amborella trichopoda | 39.42 | 8e-80 | 275 |
| LLPS-Anp-0061 | Anas platyrhynchos | 39.3 | 3e-76 | 259 |
| LLPS-Fec-3096 | Felis catus | 39.3 | 1e-79 | 268 |
| LLPS-Tag-1015 | Taeniopygia guttata | 39.27 | 5e-81 | 271 |
| LLPS-Kop-0846 | Komagataella pastoris | 39.25 | 1e-83 | 277 |
| LLPS-Nia-0693 | Nicotiana attenuata | 39.25 | 4e-74 | 252 |
| LLPS-Mea-1131 | Mesocricetus auratus | 39.19 | 6e-77 | 261 |
| LLPS-Scc-0018 | Schizosaccharomyces cryophilus | 39.19 | 9e-77 | 258 |
| LLPS-Orc-0249 | Oryctolagus cuniculus | 39.19 | 3e-78 | 264 |
| LLPS-Gaga-0453 | Gallus gallus | 39.0 | 3e-76 | 261 |
| LLPS-Lac-0207 | Latimeria chalumnae | 38.98 | 9e-81 | 271 |
| LLPS-Pes-0789 | Pelodiscus sinensis | 38.96 | 3e-77 | 262 |
| LLPS-Gaa-0388 | Gasterosteus aculeatus | 38.93 | 1e-88 | 292 |
| LLPS-Thc-0029 | Theobroma cacao | 38.84 | 1e-88 | 290 |
| LLPS-Orbr-1144 | Oryza brachyantha | 38.59 | 2e-86 | 285 |
| LLPS-Yal-0435 | Yarrowia lipolytica | 38.55 | 3e-89 | 292 |
| LLPS-Anc-0669 | Anolis carolinensis | 38.44 | 6e-81 | 270 |
| LLPS-Scf-0212 | Scleropages formosus | 38.37 | 4e-80 | 270 |
| LLPS-Usm-0084 | Ustilago maydis | 38.36 | 1e-91 | 301 |
| LLPS-Gor-0228 | Gossypium raimondii | 38.35 | 3e-87 | 286 |
| LLPS-Viv-0963 | Vitis vinifera | 38.32 | 2e-89 | 292 |
| LLPS-Crn-0168 | Cryptococcus neoformans | 38.3 | 9e-57 | 206 |
| LLPS-Cus-0088 | Cucumis sativus | 38.24 | 6e-85 | 283 |
| LLPS-Cis-0166 | Ciona savignyi | 38.23 | 2e-77 | 256 |
| LLPS-Meg-0254 | Meleagris gallopavo | 38.22 | 3e-78 | 264 |
| LLPS-Prp-0832 | Prunus persica | 38.14 | 1e-90 | 297 |
| LLPS-Scp-0352 | Schizosaccharomyces pombe | 38.12 | 2e-74 | 251 |
| LLPS-Fia-0647 | Ficedula albicollis | 38.03 | 7e-80 | 269 |
| LLPS-Orn-0095 | Oreochromis niloticus | 38.03 | 4e-86 | 286 |
| LLPS-Arl-0574 | Arabidopsis lyrata | 38.02 | 1e-83 | 277 |
| LLPS-Met-1247 | Medicago truncatula | 37.87 | 4e-84 | 281 |
| LLPS-Orl-0462 | Oryzias latipes | 37.87 | 5e-85 | 285 |
| LLPS-Aim-0111 | Ailuropoda melanoleuca | 37.64 | 2e-79 | 268 |
| LLPS-Hos-2908 | Homo sapiens | 37.56 | 2e-79 | 268 |
| LLPS-Gog-1290 | Gorilla gorilla | 37.32 | 8e-79 | 266 |
| LLPS-Aon-0117 | Aotus nancymaae | 37.32 | 6e-79 | 266 |
| LLPS-Poa-0966 | Pongo abelii | 37.32 | 1e-78 | 266 |
| LLPS-Sus-2343 | Sus scrofa | 37.25 | 5e-83 | 277 |
| LLPS-Rhb-0180 | Rhinopithecus bieti | 37.2 | 1e-62 | 222 |
| LLPS-Gas-0339 | Galdieria sulphuraria | 37.09 | 1e-76 | 257 |
| LLPS-Abg-0747 | Absidia glauca | 36.91 | 1e-85 | 281 |
| LLPS-Drm-0416 | Drosophila melanogaster | 36.78 | 1e-86 | 286 |
| LLPS-Pap-0118 | Pan paniscus | 36.71 | 4e-79 | 266 |
| LLPS-Pat-1160 | Pan troglodytes | 36.71 | 5e-79 | 266 |
| LLPS-Tru-0802 | Triticum urartu | 36.65 | 2e-70 | 241 |
| LLPS-Blg-0024 | Blumeria graminis | 36.53 | 8e-58 | 210 |
| LLPS-Pot-1078 | Populus trichocarpa | 36.34 | 2e-78 | 263 |
| LLPS-Ast-1013 | Aspergillus terreus | 35.88 | 6e-59 | 210 |
| LLPS-Glm-1855 | Glycine max | 35.84 | 2e-53 | 195 |
| LLPS-Cae-1238 | Caenorhabditis elegans | 35.68 | 8e-70 | 241 |
| LLPS-Cii-1101 | Ciona intestinalis | 35.35 | 5e-77 | 258 |
| LLPS-Asf-0935 | Aspergillus flavus | 35.29 | 3e-59 | 211 |
| LLPS-Aso-1471 | Aspergillus oryzae | 35.29 | 2e-59 | 211 |
| LLPS-Asfu-0716 | Aspergillus fumigatus | 35.2 | 2e-59 | 211 |
| LLPS-Pytr-1302 | Pyrenophora triticirepentis | 34.93 | 3e-52 | 194 |
| LLPS-Nef-1479 | Neosartorya fischeri | 34.93 | 5e-59 | 210 |
| LLPS-Cym-1015 | Cyanidioschyzon merolae | 34.72 | 6e-53 | 196 |
| LLPS-Urm-1264 | Ursus maritimus | 34.64 | 5e-53 | 197 |
| LLPS-Nec-0844 | Neurospora crassa | 34.61 | 1e-53 | 197 |
| LLPS-Hov-0815 | Hordeum vulgare | 34.42 | 1e-54 | 200 |
| LLPS-Ict-2437 | Ictidomys tridecemlineatus | 34.38 | 5e-52 | 194 |
| LLPS-Asni-0533 | Aspergillus niger | 34.28 | 2e-58 | 209 |
| LLPS-Asc-0407 | Aspergillus clavatus | 34.21 | 2e-57 | 206 |
| LLPS-Otg-1182 | Otolemur garnettii | 34.11 | 3e-52 | 195 |
| LLPS-Vir-0144 | Vigna radiata | 33.33 | 9e-54 | 198 |
| LLPS-Trv-0361 | Trichoderma virens | 32.9 | 1e-52 | 192 |