LLPS-Cas-0027
GTF2B
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | transcription initiation factor IIB |
Gene Name: | GTF2B |
Ensembl Gene: | ENSTSYG00000010351.2 |
Ensembl Protein: | ENSTSYP00000009480.2 |
Organism: | Carlito syrichta |
Taxa ID: | 1868482 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSTSYT00000010347.2 | ENSTSYP00000009480.2 |
UniProt | A0A1U7TA01, A0A1U7TA01_TARSY | |
RefSeq | , XM_008055032.1 | , XP_008053223.1, XP_008053223.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MASTSRLDAL PRVTCPNHPD AILVEDYRAG DMICPECGLV VGDRVIDVGS EWRTFSNDKA 60 61 TKDPSRVGDS QNPLLSDGDL STMIGKGTGA ASFDEFGNSK YQNRRTMSSS DRAMMNAFKE 120 121 ITTMADRINL PRNIVDRTNN LFKQVYEQKS LKGRANDAIA SACLYIACRQ EGVPRTFKEI 180 181 CAVSRISKKE IGRCFKLILK ALETSVDLIT TGDFMSRFCS NLCLPKQVQM AATHIARKAV 240 241 ELDLVPGRSP ISVAAAAIYM ASQASAEKRT QKEIGDIAGV ADVTIRQSYR LIYPRAPDLF 300 301 PTDFKFDTPV DKLPQL 316 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGCGTCCA CCAGCCGTTT GGATGCTCTT CCAAGAGTCA CATGTCCAAA CCATCCAGAT 60 61 GCGATTTTAG TGGAAGACTA CAGAGCTGGT GATATGATCT GTCCTGAATG TGGCTTGGTT 120 121 GTAGGTGACC GTGTAATTGA TGTGGGATCT GAATGGAGAA CTTTCAGCAA TGACAAAGCA 180 181 ACAAAAGATC CGTCTCGAGT TGGAGATTCT CAGAATCCTC TCTTGAGTGA TGGAGATCTG 240 241 TCTACAATGA TTGGCAAGGG TACAGGAGCT GCAAGTTTTG ATGAATTTGG CAATTCTAAG 300 301 TACCAGAATC GGAGAACAAT GAGTAGTTCT GATCGGGCAA TGATGAATGC ATTCAAAGAA 360 361 ATCACTACCA TGGCAGACAG AATTAACTTA CCTCGAAATA TAGTCGATCG AACAAATAAT 420 421 TTATTCAAGC AAGTGTACGA ACAGAAGAGC CTAAAGGGAA GAGCTAATGA TGCCATAGCT 480 481 TCTGCCTGTC TCTATATTGC CTGTAGGCAA GAAGGGGTTC CTAGGACATT TAAGGAAATC 540 541 TGTGCCGTAT CACGAATTTC TAAGAAAGAA ATCGGTCGAT GTTTTAAACT TATTTTGAAA 600 601 GCTCTAGAAA CCAGTGTGGA CTTGATCACA ACTGGGGACT TCATGTCCAG ATTCTGTTCC 660 661 AACCTCTGTC TTCCTAAGCA AGTGCAGATG GCAGCGACAC ATATAGCCCG TAAGGCTGTG 720 721 GAGCTGGACT TGGTCCCTGG GAGGAGCCCC ATCTCGGTGG CAGCGGCAGC TATTTACATG 780 781 GCCTCACAGG CATCCGCTGA GAAGAGGACC CAGAAAGAAA TTGGAGATAT TGCTGGTGTT 840 841 GCAGATGTTA CAATCAGACA GTCCTACAGA CTTATCTATC CTCGAGCCCC AGATCTGTTC 900 901 CCTACAGACT TCAAATTTGA CACTCCAGTG GACAAACTAC CACAGCTATA A 951 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Tut-0065 | Tursiops truncatus | 100.0 | 0.0 | 621 |
LLPS-Bot-1264 | Bos taurus | 100.0 | 0.0 | 621 |
LLPS-Mal-2094 | Mandrillus leucophaeus | 100.0 | 0.0 | 621 |
LLPS-Paa-0114 | Papio anubis | 100.0 | 0.0 | 621 |
LLPS-Aim-3157 | Ailuropoda melanoleuca | 100.0 | 0.0 | 609 |
LLPS-Mup-0428 | Mustela putorius furo | 100.0 | 0.0 | 621 |
LLPS-Maf-1499 | Macaca fascicularis | 100.0 | 0.0 | 621 |
LLPS-Chs-0008 | Chlorocebus sabaeus | 100.0 | 0.0 | 621 |
LLPS-Aon-2533 | Aotus nancymaae | 100.0 | 0.0 | 621 |
LLPS-Cea-0521 | Cercocebus atys | 100.0 | 0.0 | 620 |
LLPS-Sus-1425 | Sus scrofa | 100.0 | 0.0 | 621 |
LLPS-Gog-2597 | Gorilla gorilla | 100.0 | 0.0 | 621 |
LLPS-Caj-1470 | Callithrix jacchus | 100.0 | 0.0 | 621 |
LLPS-Poa-0410 | Pongo abelii | 100.0 | 0.0 | 620 |
LLPS-Caf-1187 | Canis familiaris | 100.0 | 0.0 | 621 |
LLPS-Eqc-0465 | Equus caballus | 100.0 | 0.0 | 621 |
LLPS-Mam-1669 | Macaca mulatta | 100.0 | 0.0 | 620 |
LLPS-Pat-1643 | Pan troglodytes | 100.0 | 0.0 | 609 |
LLPS-Urm-2112 | Ursus maritimus | 100.0 | 0.0 | 621 |
LLPS-Hos-0785 | Homo sapiens | 100.0 | 0.0 | 621 |
LLPS-Fec-2780 | Felis catus | 100.0 | 0.0 | 621 |
LLPS-Man-0510 | Macaca nemestrina | 100.0 | 0.0 | 620 |
LLPS-Otg-0165 | Otolemur garnettii | 100.0 | 0.0 | 621 |
LLPS-Ere-0258 | Erinaceus europaeus | 99.68 | 0.0 | 620 |
LLPS-Mea-1065 | Mesocricetus auratus | 99.68 | 0.0 | 620 |
LLPS-Mum-1268 | Mus musculus | 99.68 | 0.0 | 620 |
LLPS-Ict-2715 | Ictidomys tridecemlineatus | 99.68 | 0.0 | 618 |
LLPS-Nol-1565 | Nomascus leucogenys | 99.68 | 0.0 | 621 |
LLPS-Dio-0462 | Dipodomys ordii | 99.37 | 0.0 | 618 |
LLPS-Myl-1557 | Myotis lucifugus | 99.05 | 0.0 | 613 |
LLPS-Loa-0058 | Loxodonta africana | 99.05 | 0.0 | 614 |
LLPS-Mod-3843 | Monodelphis domestica | 98.73 | 0.0 | 613 |
LLPS-Ova-0972 | Ovis aries | 98.44 | 0.0 | 614 |
LLPS-Fud-0263 | Fukomys damarensis | 98.1 | 0.0 | 607 |
LLPS-Rhb-1244 | Rhinopithecus bieti | 97.92 | 3e-23 | 100 |
LLPS-Gaga-2562 | Gallus gallus | 97.74 | 0.0 | 595 |
LLPS-Fia-1379 | Ficedula albicollis | 97.54 | 0.0 | 544 |
LLPS-Sah-0693 | Sarcophilus harrisii | 97.15 | 0.0 | 602 |
LLPS-Anc-4026 | Anolis carolinensis | 97.15 | 0.0 | 607 |
LLPS-Tag-2142 | Taeniopygia guttata | 97.15 | 0.0 | 606 |
LLPS-Pes-2270 | Pelodiscus sinensis | 97.1 | 0.0 | 595 |
LLPS-Meg-2217 | Meleagris gallopavo | 96.81 | 0.0 | 590 |
LLPS-Anp-1204 | Anas platyrhynchos | 96.52 | 0.0 | 599 |
LLPS-Ora-1078 | Ornithorhynchus anatinus | 96.36 | 0.0 | 517 |
LLPS-Ran-0524 | Rattus norvegicus | 95.82 | 0.0 | 571 |
LLPS-Xet-0657 | Xenopus tropicalis | 95.25 | 0.0 | 594 |
LLPS-Cap-1427 | Cavia porcellus | 94.62 | 0.0 | 574 |
LLPS-Lac-0842 | Latimeria chalumnae | 94.62 | 0.0 | 586 |
LLPS-Orn-1897 | Oreochromis niloticus | 94.48 | 0.0 | 570 |
LLPS-Scf-2796 | Scleropages formosus | 93.99 | 0.0 | 586 |
LLPS-Dar-0784 | Danio rerio | 93.99 | 0.0 | 586 |
LLPS-Leo-2247 | Lepisosteus oculatus | 93.67 | 0.0 | 583 |
LLPS-Scm-2669 | Scophthalmus maximus | 93.4 | 0.0 | 578 |
LLPS-Gaa-1337 | Gasterosteus aculeatus | 93.08 | 0.0 | 577 |
LLPS-Xim-2190 | Xiphophorus maculatus | 92.77 | 0.0 | 577 |
LLPS-Ten-1822 | Tetraodon nigroviridis | 92.77 | 0.0 | 574 |
LLPS-Tar-0230 | Takifugu rubripes | 92.7 | 1e-173 | 493 |
LLPS-Pof-1902 | Poecilia formosa | 92.45 | 0.0 | 575 |
LLPS-Pap-0111 | Pan paniscus | 90.51 | 0.0 | 574 |
LLPS-Orl-2753 | Oryzias latipes | 90.28 | 0.0 | 558 |
LLPS-Asm-2018 | Astyanax mexicanus | 85.86 | 3e-123 | 360 |
LLPS-Icp-1706 | Ictalurus punctatus | 85.86 | 2e-123 | 360 |
LLPS-Drm-0459 | Drosophila melanogaster | 79.11 | 3e-173 | 490 |
LLPS-Cii-0232 | Ciona intestinalis | 74.03 | 2e-156 | 447 |
LLPS-Cis-0193 | Ciona savignyi | 72.73 | 2e-154 | 442 |
LLPS-Cae-0587 | Caenorhabditis elegans | 61.51 | 4e-129 | 378 |
LLPS-Mae-1191 | Manihot esculenta | 49.49 | 1e-71 | 231 |
LLPS-Cus-1846 | Cucumis sativus | 49.13 | 2e-70 | 228 |
LLPS-Gor-0183 | Gossypium raimondii | 48.97 | 2e-71 | 230 |
LLPS-Nia-0124 | Nicotiana attenuata | 48.97 | 9e-74 | 236 |
LLPS-Prp-2033 | Prunus persica | 48.63 | 3e-71 | 230 |
LLPS-Sot-0819 | Solanum tuberosum | 48.62 | 8e-73 | 234 |
LLPS-Mua-0456 | Musa acuminata | 48.62 | 1e-72 | 233 |
LLPS-Dac-0388 | Daucus carota | 48.6 | 6e-37 | 137 |
LLPS-Bro-0387 | Brassica oleracea | 48.45 | 2e-73 | 235 |
LLPS-Brr-2499 | Brassica rapa | 48.45 | 2e-73 | 235 |
LLPS-Sem-1355 | Selaginella moellendorffii | 48.33 | 5e-74 | 237 |
LLPS-Via-0294 | Vigna angularis | 48.29 | 3e-71 | 230 |
LLPS-Hea-1456 | Helianthus annuus | 48.28 | 9e-71 | 228 |
LLPS-Coc-0103 | Corchorus capsularis | 48.0 | 2e-72 | 233 |
LLPS-Amt-0673 | Amborella trichopoda | 47.95 | 1e-67 | 221 |
LLPS-Phv-0073 | Phaseolus vulgaris | 47.95 | 5e-71 | 229 |
LLPS-Glm-0356 | Glycine max | 47.77 | 8e-74 | 236 |
LLPS-Sei-1832 | Setaria italica | 47.75 | 2e-69 | 225 |
LLPS-Sob-1254 | Sorghum bicolor | 47.75 | 2e-69 | 225 |
LLPS-Brn-1440 | Brassica napus | 47.65 | 5e-73 | 234 |
LLPS-Met-2129 | Medicago truncatula | 47.42 | 1e-69 | 225 |
LLPS-Arl-2016 | Arabidopsis lyrata | 47.32 | 2e-71 | 230 |
LLPS-Thc-0262 | Theobroma cacao | 47.24 | 8e-72 | 231 |
LLPS-Art-0095 | Arabidopsis thaliana | 47.24 | 2e-72 | 233 |
LLPS-Orgl-2085 | Oryza glumaepatula | 46.67 | 3e-70 | 227 |
LLPS-Lep-1126 | Leersia perrieri | 46.67 | 9e-70 | 226 |
LLPS-Orb-0582 | Oryza barthii | 46.67 | 3e-70 | 227 |
LLPS-Ori-1805 | Oryza indica | 46.67 | 3e-70 | 227 |
LLPS-Orni-2388 | Oryza nivara | 46.67 | 3e-70 | 227 |
LLPS-Orr-1449 | Oryza rufipogon | 46.67 | 3e-70 | 227 |
LLPS-Orm-0159 | Oryza meridionalis | 46.67 | 3e-70 | 227 |
LLPS-Org-0019 | Oryza glaberrima | 46.67 | 3e-70 | 227 |
LLPS-Viv-0354 | Vitis vinifera | 46.67 | 3e-72 | 233 |
LLPS-Ors-1427 | Oryza sativa | 46.67 | 3e-70 | 227 |
LLPS-Orp-0072 | Oryza punctata | 46.67 | 3e-70 | 227 |
LLPS-Orbr-0290 | Oryza brachyantha | 46.67 | 9e-70 | 226 |
LLPS-Brd-0933 | Brachypodium distachyon | 46.33 | 4e-69 | 224 |
LLPS-Php-0495 | Physcomitrella patens | 46.18 | 4e-75 | 240 |
LLPS-Tra-0540 | Triticum aestivum | 45.97 | 5e-69 | 224 |
LLPS-Pot-0664 | Populus trichocarpa | 45.95 | 1e-71 | 231 |
LLPS-Scj-0117 | Schizosaccharomyces japonicus | 45.02 | 6e-65 | 214 |
LLPS-Hov-1789 | Hordeum vulgare | 44.95 | 1e-68 | 224 |
LLPS-Abg-1938 | Absidia glauca | 44.52 | 2e-66 | 218 |
LLPS-Zem-0954 | Zea mays | 44.3 | 1e-64 | 213 |
LLPS-Scp-1103 | Schizosaccharomyces pombe | 43.92 | 4e-70 | 228 |
LLPS-Scc-0373 | Schizosaccharomyces cryophilus | 43.71 | 2e-69 | 226 |
LLPS-Vir-0670 | Vigna radiata | 43.4 | 1e-62 | 208 |
LLPS-Sol-1750 | Solanum lycopersicum | 43.0 | 4e-61 | 203 |
LLPS-Yal-1181 | Yarrowia lipolytica | 41.84 | 2e-56 | 191 |
LLPS-Mel-1139 | Melampsora laricipopulina | 41.41 | 7e-64 | 212 |
LLPS-Coo-0329 | Colletotrichum orbiculare | 40.87 | 1e-62 | 217 |
LLPS-Blg-0924 | Blumeria graminis | 40.75 | 1e-58 | 198 |
LLPS-Tum-1352 | Tuber melanosporum | 40.72 | 4e-62 | 207 |
LLPS-Cogr-0724 | Colletotrichum graminicola | 40.56 | 6e-66 | 217 |
LLPS-Pug-1002 | Puccinia graminis | 40.37 | 5e-57 | 194 |
LLPS-Scs-0529 | Sclerotinia sclerotiorum | 40.34 | 5e-60 | 202 |
LLPS-Nec-0004 | Neurospora crassa | 40.06 | 4e-62 | 207 |
LLPS-Cog-0725 | Colletotrichum gloeosporioides | 39.94 | 1e-62 | 214 |
LLPS-Miv-0617 | Microbotryum violaceum | 39.41 | 4e-50 | 181 |
LLPS-Tru-0614 | Triticum urartu | 39.24 | 4e-58 | 197 |
LLPS-Put-0513 | Puccinia triticina | 38.97 | 2e-55 | 190 |
LLPS-Gag-0743 | Gaeumannomyces graminis | 38.91 | 1e-49 | 174 |
LLPS-Aso-1392 | Aspergillus oryzae | 38.68 | 4e-54 | 186 |
LLPS-Asf-0414 | Aspergillus flavus | 38.68 | 4e-54 | 186 |
LLPS-Asc-0632 | Aspergillus clavatus | 38.68 | 8e-55 | 188 |
LLPS-Asni-1182 | Aspergillus niger | 38.68 | 3e-54 | 187 |
LLPS-Asn-0519 | Aspergillus nidulans | 38.68 | 6e-54 | 186 |
LLPS-Ast-0645 | Aspergillus terreus | 38.41 | 1e-53 | 185 |
LLPS-Ved-0126 | Verticillium dahliae | 38.22 | 3e-60 | 202 |
LLPS-Asfu-1105 | Aspergillus fumigatus | 37.98 | 3e-53 | 186 |
LLPS-Nef-1552 | Neosartorya fischeri | 37.98 | 1e-53 | 185 |
LLPS-Kop-0530 | Komagataella pastoris | 37.97 | 2e-54 | 187 |
LLPS-Chc-0932 | Chondrus crispus | 37.58 | 4e-54 | 186 |
LLPS-Zyt-0074 | Zymoseptoria tritici | 37.16 | 6e-51 | 178 |
LLPS-Cym-0338 | Cyanidioschyzon merolae | 37.14 | 6e-44 | 160 |
LLPS-Mao-0798 | Magnaporthe oryzae | 37.03 | 7e-55 | 189 |
LLPS-Usm-0145 | Ustilago maydis | 36.5 | 7e-50 | 176 |
LLPS-Spr-0726 | Sporisorium reilianum | 36.5 | 7e-50 | 176 |
LLPS-Dos-1071 | Dothistroma septosporum | 36.39 | 8e-55 | 188 |
LLPS-Osl-0904 | Ostreococcus lucimarinus | 36.36 | 9e-48 | 171 |
LLPS-Sac-0912 | Saccharomyces cerevisiae | 36.24 | 9e-49 | 172 |
LLPS-Fuv-0697 | Fusarium verticillioides | 35.8 | 1e-51 | 179 |
LLPS-Map-0181 | Magnaporthe poae | 35.56 | 1e-52 | 182 |
LLPS-Lem-0735 | Leptosphaeria maculans | 35.51 | 6e-53 | 184 |
LLPS-Fuo-0033 | Fusarium oxysporum | 35.49 | 1e-50 | 177 |
LLPS-Asg-0951 | Ashbya gossypii | 35.47 | 3e-52 | 181 |
LLPS-Gas-0033 | Galdieria sulphuraria | 35.41 | 1e-45 | 164 |
LLPS-Chr-0548 | Chlamydomonas reinhardtii | 35.01 | 1e-36 | 142 |
LLPS-Beb-0028 | Beauveria bassiana | 34.69 | 4e-49 | 173 |
LLPS-Trv-0232 | Trichoderma virens | 34.67 | 1e-48 | 172 |
LLPS-Trr-0644 | Trichoderma reesei | 34.33 | 1e-47 | 170 |
LLPS-Fus-0252 | Fusarium solani | 34.29 | 3e-50 | 176 |
LLPS-Pyt-0237 | Pyrenophora teres | 33.12 | 9e-44 | 159 |
LLPS-Crn-0580 | Cryptococcus neoformans | 32.7 | 7e-47 | 168 |
LLPS-Pytr-0183 | Pyrenophora triticirepentis | 32.29 | 5e-38 | 143 |
LLPS-Phn-0316 | Phaeosphaeria nodorum | 32.23 | 2e-40 | 150 |