LLPS-Cap-4542
HIF3A
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Uncharacterized protein |
| Gene Name: | HIF3A |
| Ensembl Gene: | ENSCPOG00000024199.2 |
| Ensembl Protein: | ENSCPOP00000014728.2 |
| Organism: | Cavia porcellus |
| Taxa ID: | 10141 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nuclear speckle | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | ENSCPOT00000022549.2 | ENSCPOP00000014728.2 |
| Ensembl | ENSCPOT00000045161.1 | ENSCPOP00000030487.1 |
| UniProt | H0VVK2, H0VVK2_CAVPO | |
| GeneBank | AAKN02048258 | |
| RefSeq | XM_003464686.3, XM_013146916.1, XM_013146917.1 | XP_003464734.1, XP_013002370.1, XP_013002371.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MALGLQRARS STELRKEKSR DAARSRRSQE TEVLYQLAHT LPFARGVSAH LDKASIMRLT 60 61 ISYLRMHRLC TAGEWNQMGA EGEPLDACYL KALEGFVMVL TAEGDMAYLS ENVSKHLGLS 120 121 QLELIGHSIF DFIHPCDQEE LQDALTPRPS LSKKKPEAPT ERCFSLRMKS TLTSRGRTLN 180 181 LKAATWKVLH CSGHMRAYKP PSQTALAGSP SSEPPLQCLV LICEAIPHPG SLEPPLGRGA 240 241 FLSRHSLDMK FTYCDERIAE VAGYSPDDLI GCSAYEYIHA LDSDAVSRSI HTLLSKGQAV 300 301 TGQYRFLARS GGYLWTQTQA TVVSGGRGPQ SESIICVHFL ISRVEETGVV LSLEQTERHS 360 361 RRPFQRGTSS PKDAPNPGDR LDAPGPRILA FLYPPALSEA TLAADPRRFC SPDLRRLLAP 420 421 ILDVSAVITT PSTPQATQRP QSPLPADLPD DLLLAVEHTH RLCAAGKNPE SEDTDLDMAQ 480 481 DADTLDLEML APYISMDDDF QLSSSEQLPR AYQRPPGTVP RPRAQSFHGL SPLIPEPALL 540 541 PRWGSDPRLS CSSPSRGDPS ASSSTAGARK RALAQSSEDE GVELLGVRPP KRSPSLDPEN 600 601 FLLPPVSLSF LLMGGQTPGI QQDPHTHLLD MNGPLGLSPS LLSLYSDEDA VQPRSHFAPT 660 661 TGLAQAH 667 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGCGCTGG GGCTGCAACG GGCAAGGTCG AGCACGGAGC TGCGCAAGGA GAAGTCCCGG 60 61 GATGCGGCCC GCAGCCGGCG CAGCCAGGAG ACCGAGGTGC TATACCAGCT GGCGCACACG 120 121 CTACCCTTCG CACGCGGCGT CAGCGCCCAC CTGGACAAGG CGTCCATCAT GCGCCTCACC 180 181 ATCAGTTACC TGCGCATGCA CCGCCTCTGC ACCGCGGGGG AGTGGAACCA GATGGGAGCC 240 241 GAAGGAGAAC CACTGGATGC CTGCTACCTG AAGGCCCTGG AGGGCTTCGT CATGGTGCTC 300 301 ACTGCCGAGG GAGACATGGC TTACCTGTCG GAGAATGTCA GCAAACACCT GGGCCTCAGT 360 361 CAGCTGGAGC TCATTGGACA CAGTATCTTT GATTTCATCC ATCCCTGCGA CCAAGAGGAG 420 421 CTCCAGGACG CCCTGACCCC CAGGCCCAGC CTGTCCAAGA AGAAACCAGA GGCCCCCACC 480 481 GAGCGATGCT TCTCCTTGCG CATGAAAAGC ACCCTCACCA GCCGTGGGCG CACCCTCAAC 540 541 CTCAAGGCAG CCACCTGGAA GGTGCTGCAC TGCTCTGGAC ACATGAGGGC CTACAAGCCC 600 601 CCAAGTCAGA CAGCCCTGGC CGGGAGCCCC AGCTCTGAGC CCCCCCTACA GTGCCTGGTG 660 661 CTCATCTGTG AGGCCATCCC CCACCCGGGT AGCCTGGAGC CCCCGCTGGG CCGGGGCGCC 720 721 TTCCTGAGCC GCCACAGCCT GGACATGAAG TTCACCTACT GCGACGAGAG GATCGCAGAA 780 781 GTTGCCGGCT ACAGCCCAGA TGACCTGATC GGTTGCTCCG CCTATGAGTA CATCCACGCC 840 841 CTGGACTCGG ATGCAGTCAG CAGGAGCATT CACACCTTGC TGAGCAAGGG CCAGGCAGTG 900 901 ACAGGGCAGT ATCGCTTCCT GGCCCGGAGT GGTGGTTACC TGTGGACCCA GACCCAGGCC 960 961 ACGGTGGTGT CGGGGGGCCG GGGCCCCCAG TCAGAGAGTA TCATCTGTGT CCACTTCCTA 1020 1021 ATCAGCCGGG TGGAAGAGAC CGGAGTGGTG CTGTCCCTGG AGCAGACAGA GCGACACTCT 1080 1081 CGCAGGCCCT TTCAGCGTGG CACCTCCTCC CCAAAGGACG CCCCTAATCC TGGGGACAGG 1140 1141 CTTGATGCCC CAGGTCCCCG GATCCTGGCC TTCCTGTACC CCCCAGCCCT GAGCGAGGCT 1200 1201 ACTCTGGCTG CTGACCCCCG CCGCTTCTGT AGCCCGGATC TGCGACGCCT CCTGGCTCCA 1260 1261 ATCCTGGATG TGTCTGCAGT AATCACCACA CCCAGCACAC CACAGGCCAC CCAGCGCCCC 1320 1321 CAAAGTCCTC TCCCGGCTGA TCTCCCAGAT GACCTGCTCC TGGCTGTGGA GCACACGCAC 1380 1381 AGGCTCTGTG CTGCTGGGAA GAACCCCGAG TCCGAGGACA CCGATCTGGA CATGGCTCAG 1440 1441 GACGCCGACA CTCTGGATTT GGAGATGCTG GCCCCCTACA TCTCCATGGA TGATGACTTC 1500 1501 CAGCTCAGCT CCAGTGAGCA GCTGCCCAGG GCCTACCAAA GACCTCCAGG GACTGTGCCC 1560 1561 CGGCCCCGCG CTCAGAGCTT CCATGGCCTG TCACCCCTGA TCCCCGAGCC CGCTCTGCTG 1620 1621 CCCCGATGGG GGAGCGACCC CCGACTGAGC TGCTCCAGCC CTTCCAGAGG GGACCCCTCA 1680 1681 GCATCCTCCT CCACTGCCGG GGCTCGGAAG AGGGCCCTGG CCCAGAGCTC AGAGGACGAG 1740 1741 GGGGTGGAGC TGCTGGGTGT GAGACCCCCC AAAAGGTCCC CCAGCCTAGA TCCTGAAAAC 1800 1801 TTCCTGCTGC CTCCCGTCAG CCTGAGTTTC CTCCTGATGG GAGGCCAAAC CCCAGGGATC 1860 1861 CAGCAGGACC CTCACACCCA CCTCCTGGAC ATGAATGGGC CTTTGGGCCT GAGCCCCTCG 1920 1921 CTGCTCTCTC TCTACTCAGA CGAGGATGCC GTCCAGCCCA GGAGCCACTT CGCGCCAACC 1980 1981 ACAGGTTTGG CCCAGGCCCA CTGA 2004 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Orc-1264 | Oryctolagus cuniculus | 94.43 | 0.0 | 670 |
| LLPS-Caj-0443 | Callithrix jacchus | 93.22 | 0.0 | 565 |
| LLPS-Fud-2558 | Fukomys damarensis | 91.29 | 0.0 | 1123 |
| LLPS-Cas-3138 | Carlito syrichta | 87.29 | 0.0 | 1070 |
| LLPS-Fec-2576 | Felis catus | 87.29 | 0.0 | 1082 |
| LLPS-Eqc-4015 | Equus caballus | 87.28 | 0.0 | 1053 |
| LLPS-Tut-1808 | Tursiops truncatus | 87.14 | 0.0 | 1054 |
| LLPS-Paa-3894 | Papio anubis | 86.56 | 0.0 | 1063 |
| LLPS-Bot-4063 | Bos taurus | 86.38 | 0.0 | 1050 |
| LLPS-Sus-4205 | Sus scrofa | 86.25 | 0.0 | 1021 |
| LLPS-Mal-0069 | Mandrillus leucophaeus | 86.23 | 0.0 | 1067 |
| LLPS-Maf-1762 | Macaca fascicularis | 86.08 | 0.0 | 1066 |
| LLPS-Rhb-2589 | Rhinopithecus bieti | 86.08 | 0.0 | 1061 |
| LLPS-Cea-4367 | Cercocebus atys | 85.89 | 0.0 | 1043 |
| LLPS-Aim-2600 | Ailuropoda melanoleuca | 85.82 | 0.0 | 1035 |
| LLPS-Mup-2574 | Mustela putorius furo | 85.63 | 0.0 | 1028 |
| LLPS-Gog-4216 | Gorilla gorilla | 85.63 | 0.0 | 1053 |
| LLPS-Pat-4724 | Pan troglodytes | 85.63 | 0.0 | 1051 |
| LLPS-Nol-3519 | Nomascus leucogenys | 85.5 | 0.0 | 1054 |
| LLPS-Pap-4590 | Pan paniscus | 85.48 | 0.0 | 1049 |
| LLPS-Chs-3140 | Chlorocebus sabaeus | 85.47 | 0.0 | 934 |
| LLPS-Otg-3581 | Otolemur garnettii | 85.46 | 0.0 | 1038 |
| LLPS-Hos-1596 | Homo sapiens | 85.33 | 0.0 | 1046 |
| LLPS-Aon-0547 | Aotus nancymaae | 84.88 | 0.0 | 1035 |
| LLPS-Ict-2195 | Ictidomys tridecemlineatus | 84.5 | 0.0 | 1013 |
| LLPS-Loa-1640 | Loxodonta africana | 84.33 | 0.0 | 969 |
| LLPS-Poa-4292 | Pongo abelii | 83.82 | 0.0 | 937 |
| LLPS-Mam-2848 | Macaca mulatta | 83.58 | 0.0 | 829 |
| LLPS-Man-1988 | Macaca nemestrina | 83.21 | 0.0 | 886 |
| LLPS-Dio-0223 | Dipodomys ordii | 83.04 | 0.0 | 988 |
| LLPS-Ran-3194 | Rattus norvegicus | 83.0 | 0.0 | 982 |
| LLPS-Mum-4305 | Mus musculus | 82.61 | 0.0 | 974 |
| LLPS-Ova-3384 | Ovis aries | 82.21 | 0.0 | 1036 |
| LLPS-Mea-2799 | Mesocricetus auratus | 82.21 | 0.0 | 957 |
| LLPS-Urm-2902 | Ursus maritimus | 81.44 | 0.0 | 914 |
| LLPS-Myl-3371 | Myotis lucifugus | 80.94 | 0.0 | 1009 |
| LLPS-Sah-2305 | Sarcophilus harrisii | 73.43 | 0.0 | 903 |
| LLPS-Anp-0086 | Anas platyrhynchos | 58.79 | 4e-140 | 436 |
| LLPS-Tag-1463 | Taeniopygia guttata | 58.45 | 3e-139 | 434 |
| LLPS-Xet-0336 | Xenopus tropicalis | 58.29 | 3e-141 | 439 |
| LLPS-Fia-1491 | Ficedula albicollis | 58.17 | 8e-139 | 433 |
| LLPS-Gaga-0901 | Gallus gallus | 57.83 | 4e-140 | 436 |
| LLPS-Leo-1207 | Lepisosteus oculatus | 57.79 | 4e-140 | 423 |
| LLPS-Dar-3267 | Danio rerio | 57.79 | 6e-135 | 422 |
| LLPS-Meg-0124 | Meleagris gallopavo | 57.66 | 5e-138 | 431 |
| LLPS-Anc-1307 | Anolis carolinensis | 57.55 | 3e-139 | 434 |
| LLPS-Scf-0799 | Scleropages formosus | 57.22 | 8e-137 | 426 |
| LLPS-Lac-2249 | Latimeria chalumnae | 57.14 | 8e-137 | 428 |
| LLPS-Pes-1194 | Pelodiscus sinensis | 57.1 | 1e-138 | 432 |
| LLPS-Mod-1374 | Monodelphis domestica | 56.82 | 4e-137 | 429 |
| LLPS-Orn-2705 | Oreochromis niloticus | 56.66 | 8e-135 | 421 |
| LLPS-Caf-3469 | Canis familiaris | 56.41 | 5e-140 | 437 |
| LLPS-Asm-1990 | Astyanax mexicanus | 56.34 | 1e-134 | 421 |
| LLPS-Tar-1255 | Takifugu rubripes | 56.21 | 4e-128 | 403 |
| LLPS-Xim-1693 | Xiphophorus maculatus | 56.18 | 3e-130 | 409 |
| LLPS-Ten-1414 | Tetraodon nigroviridis | 55.65 | 2e-116 | 374 |
| LLPS-Ora-3314 | Ornithorhynchus anatinus | 55.48 | 6e-112 | 362 |
| LLPS-Pof-0092 | Poecilia formosa | 55.18 | 5e-130 | 409 |
| LLPS-Scm-1682 | Scophthalmus maximus | 55.18 | 1e-130 | 410 |
| LLPS-Icp-1756 | Ictalurus punctatus | 55.15 | 6e-129 | 406 |
| LLPS-Orl-0622 | Oryzias latipes | 54.49 | 7e-127 | 400 |
| LLPS-Gaa-2890 | Gasterosteus aculeatus | 52.79 | 3e-122 | 388 |
| LLPS-Cii-0865 | Ciona intestinalis | 37.68 | 5e-49 | 178 |
| LLPS-Cis-1012 | Ciona savignyi | 36.97 | 6e-72 | 253 |
| LLPS-Drm-0349 | Drosophila melanogaster | 35.95 | 9e-73 | 262 |