• Disorder
  • Domain
  • PTM
  • Variation
  • Mutation
  • Interaction
  • Disease
  • Drug
  • Physicochemical
  • Function
  • Proteomics
  • Structure
  • Localization
  • Expression
  • Element
  • Methylation

LLPS-Cap-1740
LSM6

Integrated Annotations

▼ OVERVIEW


Status: Unreviewed
Protein Name: Uncharacterized protein
Gene Name: LSM6
Ensembl Gene: ENSCPOG00000032655.1
Ensembl Protein: ENSCPOP00000028260.1
Organism: Cavia porcellus
Taxa ID: 10141
LLPS Type: LLPS regulator


▼ PROPERTY



——— Disorder propensity (calculated by IUPred2A)

▼ Classification


Condensates:
CondensateEvidenceOrthologs
Nuclear speckle, P-body, Stress granulePredicted from orthologs(View)

▼ SEQUENCE


Protein Sequence (FASTA)
1     MSLRKQTPSD  FLKQIIGRPV  VVKLNSGVDY  RGVLACLDGY  MNIALEQTEE  YVNGQLKNKY  60
61    GDAFIRGNNV  LYISTQKRRM  80
Nucleotide CDS Sequence (FASTA)
1     ATGAGTCTGC  GGAAGCAAAC  TCCTAGTGAC  TTCTTAAAGC  AAATCATCGG  AAGGCCAGTT  60
61    GTGGTCAAAT  TAAATTCTGG  AGTGGATTAT  CGAGGGGTCC  TGGCTTGCCT  GGATGGCTAT  120
121   ATGAATATAG  CCCTGGAGCA  GACAGAAGAG  TATGTAAACG  GACAACTCAA  GAATAAGTAT  180
181   GGGGATGCGT  TTATCCGAGG  AAACAATGTA  TTGTACATAA  GTACACAGAA  GAGAAGGATG  240
241   TGA  243

▼ ORTHOLOGY


DrLLPS IDOrganismIdentityE-valueScore
LLPS-Cas-0554Carlito syrichta100.01e-52 165
LLPS-Gaga-2644Gallus gallus100.01e-52 165
LLPS-Xet-0754Xenopus tropicalis100.01e-52 165
LLPS-Tag-0100Taeniopygia guttata100.01e-52 165
LLPS-Ict-2414Ictidomys tridecemlineatus100.01e-52 165
LLPS-Nol-1866Nomascus leucogenys100.01e-52 165
LLPS-Anc-1586Anolis carolinensis100.01e-52 165
LLPS-Eqc-2702Equus caballus100.01e-52 165
LLPS-Caf-2044Canis familiaris100.01e-52 165
LLPS-Poa-2687Pongo abelii100.01e-52 165
LLPS-Pes-0989Pelodiscus sinensis100.01e-52 165
LLPS-Otg-3070Otolemur garnettii100.01e-52 165
LLPS-Rhb-2533Rhinopithecus bieti100.01e-52 165
LLPS-Fia-1455Ficedula albicollis100.01e-52 165
LLPS-Orc-2612Oryctolagus cuniculus100.03e-52 167
LLPS-Lac-0994Latimeria chalumnae100.01e-52 165
LLPS-Mod-1307Monodelphis domestica100.01e-52 165
LLPS-Fec-0766Felis catus100.01e-52 165
LLPS-Pap-3007Pan paniscus100.01e-52 165
LLPS-Pat-0934Pan troglodytes100.01e-52 165
LLPS-Meg-1159Meleagris gallopavo100.01e-52 165
LLPS-Hos-0324Homo sapiens100.01e-52 165
LLPS-Loa-1600Loxodonta africana100.01e-52 165
LLPS-Man-0713Macaca nemestrina100.01e-52 165
LLPS-Ran-1522Rattus norvegicus100.01e-52 165
LLPS-Myl-2269Myotis lucifugus100.01e-52 165
LLPS-Mup-2910Mustela putorius furo100.09e-52 163
LLPS-Aim-0799Ailuropoda melanoleuca100.01e-52 165
LLPS-Paa-1798Papio anubis100.01e-52 165
LLPS-Mal-2442Mandrillus leucophaeus100.01e-52 165
LLPS-Tut-1655Tursiops truncatus100.01e-52 165
LLPS-Bot-0887Bos taurus100.03e-53 167
LLPS-Dio-2887Dipodomys ordii100.01e-52 165
LLPS-Gog-3011Gorilla gorilla100.01e-52 165
LLPS-Caj-1330Callithrix jacchus100.01e-52 165
LLPS-Fud-2994Fukomys damarensis100.01e-52 165
LLPS-Chs-3522Chlorocebus sabaeus100.01e-52 165
LLPS-Mea-3387Mesocricetus auratus100.01e-52 165
LLPS-Mum-0241Mus musculus100.01e-52 165
LLPS-Maf-1426Macaca fascicularis100.01e-52 165
LLPS-Cea-2188Cercocebus atys100.01e-52 165
LLPS-Aon-0743Aotus nancymaae100.01e-52 165
LLPS-Sus-2488Sus scrofa100.01e-52 165
LLPS-Cis-1619Ciona savignyi97.371e-48 155
LLPS-Scm-1251Scophthalmus maximus97.19e-43 143
LLPS-Dar-1648Danio rerio96.252e-51 162
LLPS-Scf-1549Scleropages formosus96.252e-51 162
LLPS-Asm-0247Astyanax mexicanus96.253e-51 163
LLPS-Leo-2174Lepisosteus oculatus96.252e-51 162
LLPS-Gaa-2223Gasterosteus aculeatus96.21e-50 160
LLPS-Cii-0292Ciona intestinalis96.055e-48 153
LLPS-Xim-1218Xiphophorus maculatus95.711e-43 142
LLPS-Ten-0064Tetraodon nigroviridis95.01e-50 160
LLPS-Orn-2842Oreochromis niloticus95.01e-50 160
LLPS-Pof-0270Poecilia formosa95.01e-50 160
LLPS-Tar-0753Takifugu rubripes95.01e-50 160
LLPS-Icp-0217Ictalurus punctatus95.06e-51 160
LLPS-Orl-1309Oryzias latipes93.752e-50 159
LLPS-Ova-0770Ovis aries93.675e-48 154
LLPS-Brd-1777Brachypodium distachyon93.151e-43 143
LLPS-Urm-3076Ursus maritimus91.031e-44 146
LLPS-Bro-0417Brassica oleracea90.285e-42 138
LLPS-Brr-1685Brassica rapa90.285e-42 138
LLPS-Brn-1993Brassica napus90.285e-42 138
LLPS-Zem-0334Zea mays89.337e-44 143
LLPS-Org-0592Oryza glaberrima89.336e-44 143
LLPS-Orm-0005Oryza meridionalis89.331e-43 143
LLPS-Orr-1730Oryza rufipogon89.335e-44 144
LLPS-Orbr-1597Oryza brachyantha89.331e-43 143
LLPS-Sob-1048Sorghum bicolor89.335e-44 144
LLPS-Amt-0534Amborella trichopoda89.334e-44 144
LLPS-Ors-0107Oryza sativa89.335e-44 144
LLPS-Tra-1157Triticum aestivum89.337e-44 143
LLPS-Sei-1081Setaria italica89.336e-44 143
LLPS-Hov-1409Hordeum vulgare89.333e-44 145
LLPS-Orgl-0413Oryza glumaepatula89.335e-44 144
LLPS-Lep-1498Leersia perrieri89.338e-44 143
LLPS-Php-1017Physcomitrella patens89.331e-43 142
LLPS-Orni-2001Oryza nivara89.335e-44 144
LLPS-Mua-0823Musa acuminata89.338e-44 143
LLPS-Ori-1365Oryza indica89.335e-44 144
LLPS-Orb-0555Oryza barthii89.334e-44 144
LLPS-Hea-0240Helianthus annuus88.312e-44 144
LLPS-Phv-1711Phaseolus vulgaris88.08e-44 143
LLPS-Orp-0871Oryza punctata88.03e-43 141
LLPS-Met-0005Medicago truncatula88.06e-44 143
LLPS-Vir-0370Vigna radiata88.08e-44 143
LLPS-Via-0773Vigna angularis88.08e-44 143
LLPS-Sol-1102Solanum lycopersicum88.09e-44 143
LLPS-Glm-1762Glycine max88.06e-44 143
LLPS-Prp-1355Prunus persica87.679e-42 137
LLPS-Sem-0243Selaginella moellendorffii87.671e-42 140
LLPS-Arl-2620Arabidopsis lyrata86.113e-41 136
LLPS-Drm-0766Drosophila melanogaster85.714e-42 138
LLPS-Art-2279Arabidopsis thaliana85.336e-41 135
LLPS-Coc-0257Corchorus capsularis84.816e-44 143
LLPS-Mae-2390Manihot esculenta84.815e-44 143
LLPS-Gor-0519Gossypium raimondii84.814e-44 144
LLPS-Viv-0960Vitis vinifera84.814e-44 144
LLPS-Pot-1540Populus trichocarpa84.815e-44 144
LLPS-Cus-0342Cucumis sativus84.813e-44 144
LLPS-Sot-0684Solanum tuberosum84.815e-44 144
LLPS-Thc-0695Theobroma cacao84.814e-44 144
LLPS-Chr-0544Chlamydomonas reinhardtii84.291e-38 129
LLPS-Dac-0293Daucus carota83.543e-43 141
LLPS-Cae-0371Caenorhabditis elegans81.332e-41 136
LLPS-Pug-0540Puccinia graminis79.412e-34 119
LLPS-Mel-0546Melampsora laricipopulina75.346e-36 123
LLPS-Gas-0253Galdieria sulphuraria75.327e-40 132
LLPS-Ora-1862Ornithorhynchus anatinus74.362e-32 113
LLPS-Chc-0498Chondrus crispus74.324e-37 126
LLPS-Scc-0633Schizosaccharomyces cryophilus72.862e-34 119
LLPS-Abg-1430Absidia glauca71.014e-31 110
LLPS-Scj-1022Schizosaccharomyces japonicus70.02e-33 116
LLPS-Asn-0821Aspergillus nidulans69.121e-27 101
LLPS-Fuo-1301Fusarium oxysporum68.572e-28 103
LLPS-Fuv-0486Fusarium verticillioides68.572e-28 103
LLPS-Usm-1354Ustilago maydis68.09e-32 112
LLPS-Spr-0205Sporisorium reilianum68.04e-32 113
LLPS-Miv-0679Microbotryum violaceum67.658e-29 104
LLPS-Cogr-0176Colletotrichum graminicola67.613e-28 103
LLPS-Cog-0924Colletotrichum gloeosporioides67.618e-28 102
LLPS-Coo-0837Colletotrichum orbiculare67.611e-28 103
LLPS-Dos-1123Dothistroma septosporum67.141e-27 102
LLPS-Ved-0554Verticillium dahliae67.148e-2799.4
LLPS-Tum-0217Tuber melanosporum67.111e-29 107
LLPS-Asfu-0367Aspergillus fumigatus65.716e-2595.1
LLPS-Nef-0283Neosartorya fischeri65.713e-2595.9
LLPS-Beb-0026Beauveria bassiana65.715e-27 100
LLPS-Nec-0226Neurospora crassa65.712e-27 101
LLPS-Scp-1348Schizosaccharomyces pombe65.711e-30 108
LLPS-Trr-0463Trichoderma reesei65.623e-2287.8
LLPS-Zyt-0233Zymoseptoria tritici65.083e-2082.8
LLPS-Blg-0793Blumeria graminis64.712e-2390.5
LLPS-Mao-1022Magnaporthe oryzae64.713e-2595.1
LLPS-Trv-0584Trichoderma virens63.897e-2697.1
LLPS-Gag-0770Gaeumannomyces graminis63.773e-2595.5
LLPS-Asc-0428Aspergillus clavatus62.162e-2596.7
LLPS-Map-0164Magnaporthe poae61.976e-2594.7
LLPS-Cym-0310Cyanidioschyzon merolae60.03e-28 103
LLPS-Crn-1222Cryptococcus neoformans59.423e-2492.8
LLPS-Pytr-0588Pyrenophora triticirepentis57.971e-2289.0
LLPS-Pyt-1103Pyrenophora teres57.971e-2289.0
LLPS-Phn-1081Phaeosphaeria nodorum55.079e-2184.0
LLPS-Lem-0645Leptosphaeria maculans53.012e-2083.6
LLPS-Ere-0081Erinaceus europaeus51.522e-1775.5
LLPS-Sah-0730Sarcophilus harrisii51.521e-1776.3
LLPS-Osl-0626Ostreococcus lucimarinus46.971e-1570.5
LLPS-Kop-0362Komagataella pastoris45.835e-1568.9
LLPS-Tru-1685Triticum urartu45.451e-1570.5