LLPS-Cap-1740
LSM6
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Uncharacterized protein |
Gene Name: | LSM6 |
Ensembl Gene: | ENSCPOG00000032655.1 |
Ensembl Protein: | ENSCPOP00000028260.1 |
Organism: | Cavia porcellus |
Taxa ID: | 10141 |
LLPS Type: | LLPS regulator |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Nuclear speckle, P-body, Stress granule | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSCPOT00000038929.1 | ENSCPOP00000028260.1 |
UniProt | A0A286XSB8, A0A286XSB8_CAVPO | |
GeneBank | AAKN02011825 | |
RefSeq | XM_003476841.3, XM_005006784.2 | XP_003476889.1, XP_005006841.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MSLRKQTPSD FLKQIIGRPV VVKLNSGVDY RGVLACLDGY MNIALEQTEE YVNGQLKNKY 60 61 GDAFIRGNNV LYISTQKRRM 80 |
Nucleotide CDS Sequence (FASTA) |
1 ATGAGTCTGC GGAAGCAAAC TCCTAGTGAC TTCTTAAAGC AAATCATCGG AAGGCCAGTT 60 61 GTGGTCAAAT TAAATTCTGG AGTGGATTAT CGAGGGGTCC TGGCTTGCCT GGATGGCTAT 120 121 ATGAATATAG CCCTGGAGCA GACAGAAGAG TATGTAAACG GACAACTCAA GAATAAGTAT 180 181 GGGGATGCGT TTATCCGAGG AAACAATGTA TTGTACATAA GTACACAGAA GAGAAGGATG 240 241 TGA 243 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Cas-0554 | Carlito syrichta | 100.0 | 1e-52 | 165 |
LLPS-Gaga-2644 | Gallus gallus | 100.0 | 1e-52 | 165 |
LLPS-Xet-0754 | Xenopus tropicalis | 100.0 | 1e-52 | 165 |
LLPS-Tag-0100 | Taeniopygia guttata | 100.0 | 1e-52 | 165 |
LLPS-Ict-2414 | Ictidomys tridecemlineatus | 100.0 | 1e-52 | 165 |
LLPS-Nol-1866 | Nomascus leucogenys | 100.0 | 1e-52 | 165 |
LLPS-Anc-1586 | Anolis carolinensis | 100.0 | 1e-52 | 165 |
LLPS-Eqc-2702 | Equus caballus | 100.0 | 1e-52 | 165 |
LLPS-Caf-2044 | Canis familiaris | 100.0 | 1e-52 | 165 |
LLPS-Poa-2687 | Pongo abelii | 100.0 | 1e-52 | 165 |
LLPS-Pes-0989 | Pelodiscus sinensis | 100.0 | 1e-52 | 165 |
LLPS-Otg-3070 | Otolemur garnettii | 100.0 | 1e-52 | 165 |
LLPS-Rhb-2533 | Rhinopithecus bieti | 100.0 | 1e-52 | 165 |
LLPS-Fia-1455 | Ficedula albicollis | 100.0 | 1e-52 | 165 |
LLPS-Orc-2612 | Oryctolagus cuniculus | 100.0 | 3e-52 | 167 |
LLPS-Lac-0994 | Latimeria chalumnae | 100.0 | 1e-52 | 165 |
LLPS-Mod-1307 | Monodelphis domestica | 100.0 | 1e-52 | 165 |
LLPS-Fec-0766 | Felis catus | 100.0 | 1e-52 | 165 |
LLPS-Pap-3007 | Pan paniscus | 100.0 | 1e-52 | 165 |
LLPS-Pat-0934 | Pan troglodytes | 100.0 | 1e-52 | 165 |
LLPS-Meg-1159 | Meleagris gallopavo | 100.0 | 1e-52 | 165 |
LLPS-Hos-0324 | Homo sapiens | 100.0 | 1e-52 | 165 |
LLPS-Loa-1600 | Loxodonta africana | 100.0 | 1e-52 | 165 |
LLPS-Man-0713 | Macaca nemestrina | 100.0 | 1e-52 | 165 |
LLPS-Ran-1522 | Rattus norvegicus | 100.0 | 1e-52 | 165 |
LLPS-Myl-2269 | Myotis lucifugus | 100.0 | 1e-52 | 165 |
LLPS-Mup-2910 | Mustela putorius furo | 100.0 | 9e-52 | 163 |
LLPS-Aim-0799 | Ailuropoda melanoleuca | 100.0 | 1e-52 | 165 |
LLPS-Paa-1798 | Papio anubis | 100.0 | 1e-52 | 165 |
LLPS-Mal-2442 | Mandrillus leucophaeus | 100.0 | 1e-52 | 165 |
LLPS-Tut-1655 | Tursiops truncatus | 100.0 | 1e-52 | 165 |
LLPS-Bot-0887 | Bos taurus | 100.0 | 3e-53 | 167 |
LLPS-Dio-2887 | Dipodomys ordii | 100.0 | 1e-52 | 165 |
LLPS-Gog-3011 | Gorilla gorilla | 100.0 | 1e-52 | 165 |
LLPS-Caj-1330 | Callithrix jacchus | 100.0 | 1e-52 | 165 |
LLPS-Fud-2994 | Fukomys damarensis | 100.0 | 1e-52 | 165 |
LLPS-Chs-3522 | Chlorocebus sabaeus | 100.0 | 1e-52 | 165 |
LLPS-Mea-3387 | Mesocricetus auratus | 100.0 | 1e-52 | 165 |
LLPS-Mum-0241 | Mus musculus | 100.0 | 1e-52 | 165 |
LLPS-Maf-1426 | Macaca fascicularis | 100.0 | 1e-52 | 165 |
LLPS-Cea-2188 | Cercocebus atys | 100.0 | 1e-52 | 165 |
LLPS-Aon-0743 | Aotus nancymaae | 100.0 | 1e-52 | 165 |
LLPS-Sus-2488 | Sus scrofa | 100.0 | 1e-52 | 165 |
LLPS-Cis-1619 | Ciona savignyi | 97.37 | 1e-48 | 155 |
LLPS-Scm-1251 | Scophthalmus maximus | 97.1 | 9e-43 | 143 |
LLPS-Dar-1648 | Danio rerio | 96.25 | 2e-51 | 162 |
LLPS-Scf-1549 | Scleropages formosus | 96.25 | 2e-51 | 162 |
LLPS-Asm-0247 | Astyanax mexicanus | 96.25 | 3e-51 | 163 |
LLPS-Leo-2174 | Lepisosteus oculatus | 96.25 | 2e-51 | 162 |
LLPS-Gaa-2223 | Gasterosteus aculeatus | 96.2 | 1e-50 | 160 |
LLPS-Cii-0292 | Ciona intestinalis | 96.05 | 5e-48 | 153 |
LLPS-Xim-1218 | Xiphophorus maculatus | 95.71 | 1e-43 | 142 |
LLPS-Ten-0064 | Tetraodon nigroviridis | 95.0 | 1e-50 | 160 |
LLPS-Orn-2842 | Oreochromis niloticus | 95.0 | 1e-50 | 160 |
LLPS-Pof-0270 | Poecilia formosa | 95.0 | 1e-50 | 160 |
LLPS-Tar-0753 | Takifugu rubripes | 95.0 | 1e-50 | 160 |
LLPS-Icp-0217 | Ictalurus punctatus | 95.0 | 6e-51 | 160 |
LLPS-Orl-1309 | Oryzias latipes | 93.75 | 2e-50 | 159 |
LLPS-Ova-0770 | Ovis aries | 93.67 | 5e-48 | 154 |
LLPS-Brd-1777 | Brachypodium distachyon | 93.15 | 1e-43 | 143 |
LLPS-Urm-3076 | Ursus maritimus | 91.03 | 1e-44 | 146 |
LLPS-Bro-0417 | Brassica oleracea | 90.28 | 5e-42 | 138 |
LLPS-Brr-1685 | Brassica rapa | 90.28 | 5e-42 | 138 |
LLPS-Brn-1993 | Brassica napus | 90.28 | 5e-42 | 138 |
LLPS-Zem-0334 | Zea mays | 89.33 | 7e-44 | 143 |
LLPS-Org-0592 | Oryza glaberrima | 89.33 | 6e-44 | 143 |
LLPS-Orm-0005 | Oryza meridionalis | 89.33 | 1e-43 | 143 |
LLPS-Orr-1730 | Oryza rufipogon | 89.33 | 5e-44 | 144 |
LLPS-Orbr-1597 | Oryza brachyantha | 89.33 | 1e-43 | 143 |
LLPS-Sob-1048 | Sorghum bicolor | 89.33 | 5e-44 | 144 |
LLPS-Amt-0534 | Amborella trichopoda | 89.33 | 4e-44 | 144 |
LLPS-Ors-0107 | Oryza sativa | 89.33 | 5e-44 | 144 |
LLPS-Tra-1157 | Triticum aestivum | 89.33 | 7e-44 | 143 |
LLPS-Sei-1081 | Setaria italica | 89.33 | 6e-44 | 143 |
LLPS-Hov-1409 | Hordeum vulgare | 89.33 | 3e-44 | 145 |
LLPS-Orgl-0413 | Oryza glumaepatula | 89.33 | 5e-44 | 144 |
LLPS-Lep-1498 | Leersia perrieri | 89.33 | 8e-44 | 143 |
LLPS-Php-1017 | Physcomitrella patens | 89.33 | 1e-43 | 142 |
LLPS-Orni-2001 | Oryza nivara | 89.33 | 5e-44 | 144 |
LLPS-Mua-0823 | Musa acuminata | 89.33 | 8e-44 | 143 |
LLPS-Ori-1365 | Oryza indica | 89.33 | 5e-44 | 144 |
LLPS-Orb-0555 | Oryza barthii | 89.33 | 4e-44 | 144 |
LLPS-Hea-0240 | Helianthus annuus | 88.31 | 2e-44 | 144 |
LLPS-Phv-1711 | Phaseolus vulgaris | 88.0 | 8e-44 | 143 |
LLPS-Orp-0871 | Oryza punctata | 88.0 | 3e-43 | 141 |
LLPS-Met-0005 | Medicago truncatula | 88.0 | 6e-44 | 143 |
LLPS-Vir-0370 | Vigna radiata | 88.0 | 8e-44 | 143 |
LLPS-Via-0773 | Vigna angularis | 88.0 | 8e-44 | 143 |
LLPS-Sol-1102 | Solanum lycopersicum | 88.0 | 9e-44 | 143 |
LLPS-Glm-1762 | Glycine max | 88.0 | 6e-44 | 143 |
LLPS-Prp-1355 | Prunus persica | 87.67 | 9e-42 | 137 |
LLPS-Sem-0243 | Selaginella moellendorffii | 87.67 | 1e-42 | 140 |
LLPS-Arl-2620 | Arabidopsis lyrata | 86.11 | 3e-41 | 136 |
LLPS-Drm-0766 | Drosophila melanogaster | 85.71 | 4e-42 | 138 |
LLPS-Art-2279 | Arabidopsis thaliana | 85.33 | 6e-41 | 135 |
LLPS-Coc-0257 | Corchorus capsularis | 84.81 | 6e-44 | 143 |
LLPS-Mae-2390 | Manihot esculenta | 84.81 | 5e-44 | 143 |
LLPS-Gor-0519 | Gossypium raimondii | 84.81 | 4e-44 | 144 |
LLPS-Viv-0960 | Vitis vinifera | 84.81 | 4e-44 | 144 |
LLPS-Pot-1540 | Populus trichocarpa | 84.81 | 5e-44 | 144 |
LLPS-Cus-0342 | Cucumis sativus | 84.81 | 3e-44 | 144 |
LLPS-Sot-0684 | Solanum tuberosum | 84.81 | 5e-44 | 144 |
LLPS-Thc-0695 | Theobroma cacao | 84.81 | 4e-44 | 144 |
LLPS-Chr-0544 | Chlamydomonas reinhardtii | 84.29 | 1e-38 | 129 |
LLPS-Dac-0293 | Daucus carota | 83.54 | 3e-43 | 141 |
LLPS-Cae-0371 | Caenorhabditis elegans | 81.33 | 2e-41 | 136 |
LLPS-Pug-0540 | Puccinia graminis | 79.41 | 2e-34 | 119 |
LLPS-Mel-0546 | Melampsora laricipopulina | 75.34 | 6e-36 | 123 |
LLPS-Gas-0253 | Galdieria sulphuraria | 75.32 | 7e-40 | 132 |
LLPS-Ora-1862 | Ornithorhynchus anatinus | 74.36 | 2e-32 | 113 |
LLPS-Chc-0498 | Chondrus crispus | 74.32 | 4e-37 | 126 |
LLPS-Scc-0633 | Schizosaccharomyces cryophilus | 72.86 | 2e-34 | 119 |
LLPS-Abg-1430 | Absidia glauca | 71.01 | 4e-31 | 110 |
LLPS-Scj-1022 | Schizosaccharomyces japonicus | 70.0 | 2e-33 | 116 |
LLPS-Asn-0821 | Aspergillus nidulans | 69.12 | 1e-27 | 101 |
LLPS-Fuo-1301 | Fusarium oxysporum | 68.57 | 2e-28 | 103 |
LLPS-Fuv-0486 | Fusarium verticillioides | 68.57 | 2e-28 | 103 |
LLPS-Usm-1354 | Ustilago maydis | 68.0 | 9e-32 | 112 |
LLPS-Spr-0205 | Sporisorium reilianum | 68.0 | 4e-32 | 113 |
LLPS-Miv-0679 | Microbotryum violaceum | 67.65 | 8e-29 | 104 |
LLPS-Cogr-0176 | Colletotrichum graminicola | 67.61 | 3e-28 | 103 |
LLPS-Cog-0924 | Colletotrichum gloeosporioides | 67.61 | 8e-28 | 102 |
LLPS-Coo-0837 | Colletotrichum orbiculare | 67.61 | 1e-28 | 103 |
LLPS-Dos-1123 | Dothistroma septosporum | 67.14 | 1e-27 | 102 |
LLPS-Ved-0554 | Verticillium dahliae | 67.14 | 8e-27 | 99.4 |
LLPS-Tum-0217 | Tuber melanosporum | 67.11 | 1e-29 | 107 |
LLPS-Asfu-0367 | Aspergillus fumigatus | 65.71 | 6e-25 | 95.1 |
LLPS-Nef-0283 | Neosartorya fischeri | 65.71 | 3e-25 | 95.9 |
LLPS-Beb-0026 | Beauveria bassiana | 65.71 | 5e-27 | 100 |
LLPS-Nec-0226 | Neurospora crassa | 65.71 | 2e-27 | 101 |
LLPS-Scp-1348 | Schizosaccharomyces pombe | 65.71 | 1e-30 | 108 |
LLPS-Trr-0463 | Trichoderma reesei | 65.62 | 3e-22 | 87.8 |
LLPS-Zyt-0233 | Zymoseptoria tritici | 65.08 | 3e-20 | 82.8 |
LLPS-Blg-0793 | Blumeria graminis | 64.71 | 2e-23 | 90.5 |
LLPS-Mao-1022 | Magnaporthe oryzae | 64.71 | 3e-25 | 95.1 |
LLPS-Trv-0584 | Trichoderma virens | 63.89 | 7e-26 | 97.1 |
LLPS-Gag-0770 | Gaeumannomyces graminis | 63.77 | 3e-25 | 95.5 |
LLPS-Asc-0428 | Aspergillus clavatus | 62.16 | 2e-25 | 96.7 |
LLPS-Map-0164 | Magnaporthe poae | 61.97 | 6e-25 | 94.7 |
LLPS-Cym-0310 | Cyanidioschyzon merolae | 60.0 | 3e-28 | 103 |
LLPS-Crn-1222 | Cryptococcus neoformans | 59.42 | 3e-24 | 92.8 |
LLPS-Pytr-0588 | Pyrenophora triticirepentis | 57.97 | 1e-22 | 89.0 |
LLPS-Pyt-1103 | Pyrenophora teres | 57.97 | 1e-22 | 89.0 |
LLPS-Phn-1081 | Phaeosphaeria nodorum | 55.07 | 9e-21 | 84.0 |
LLPS-Lem-0645 | Leptosphaeria maculans | 53.01 | 2e-20 | 83.6 |
LLPS-Ere-0081 | Erinaceus europaeus | 51.52 | 2e-17 | 75.5 |
LLPS-Sah-0730 | Sarcophilus harrisii | 51.52 | 1e-17 | 76.3 |
LLPS-Osl-0626 | Ostreococcus lucimarinus | 46.97 | 1e-15 | 70.5 |
LLPS-Kop-0362 | Komagataella pastoris | 45.83 | 5e-15 | 68.9 |
LLPS-Tru-1685 | Triticum urartu | 45.45 | 1e-15 | 70.5 |