LLPS-Caj-3503
RAPGEF6
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Uncharacterized protein |
Gene Name: | RAPGEF6 |
Ensembl Gene: | ENSCJAG00000014433.4 |
Ensembl Protein: | ENSCJAP00000060186.1 |
Organism: | Callithrix jacchus |
Taxa ID: | 9483 |
LLPS Type: | LLPS regulator |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Stress granule, Postsynaptic density | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSCJAT00000074172.1 | ENSCJAP00000060186.1 |
Ensembl | ENSCJAT00000028361.3 | ENSCJAP00000026831.3 |
Ensembl | ENSCJAT00000085858.1 | ENSCJAP00000064205.1 |
Ensembl | ENSCJAT00000028379.3 | ENSCJAP00000026849.3 |
Ensembl | ENSCJAT00000028320.3 | ENSCJAP00000026794.3 |
Ensembl | ENSCJAT00000028413.2 | ENSCJAP00000026880.2 |
UniProt | A0A2R8MIC7, A0A2R8MIC7_CALJA | |
RefSeq | XM_002744620.3 | XP_002744666.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MNSPVDPGAR QALRKKPPER TPEDLNTIYS YLHGMEILSN LREHQLRLMS ARARYERYSG 60 61 NQVLFCSETI ARCWYILLSG SVLVKDSMVL PPCSFGKQFG GKRGCDCLVL EPSEMIVVEN 120 121 AKDNEDSILQ REIPARQSRR RFRKINYKGE RQTITDDVEV NSYLSLPADL TKMHLTDNPH 180 181 PQVTHVSSSQ SGCSIASDSG SSSLSDIYQA TESEVGDVDL TRLPEGPVDS EDDEEEDEEI 240 241 DRTDPLQGRD LVRECLEKEP ADKTDDDIEQ LLEFMHQLPA FANMTMSVRR ELCSVMIFEV 300 301 VEQAGAVILE DGQELDSWYV ILNGTVEISH PDGKVENLFM GNSFGITPTL DKQYMHGIVR 360 361 TKVDDCQFVC IAQQDYWRIL NHVEKNTHKV EEEGEIVMVH EHRELDRSGT RKGHIVIKAT 420 421 PERLIMHLIE EHSIVDPTYI EDFLLTYRTF LESPLDVGIK LLEWFKIDSL RDKVTRIVLL 480 481 WVNNHFNDFE GDPAMTRFLE EFEKNLEDTK MNGHLRLLNI ACAAKAKWRQ VVLQKASRES 540 541 PLQFSLNGGS EKGFGIFIEG VEPGSKAADS GLKRGDQIME VNGQNFENIT FMKALEILRN 600 601 NTHLALTVKT NIFVFKELLC RTEQEKSGVP HIPKIAEKKS NRHSIQHLPG DIEQASQEKG 660 661 SKKVKANTVS GGRNKIRKIL DKTRFSILPP KLFSDGGLSQ SQDDSIVGTR HCRHSLAIMP 720 721 IPGTLSSSSP DLLQPTTSML DFSNPSDIPD QVIRVFKADQ QSCYIIISKD TTAKEVVCHA 780 781 VHEFGLTGAS DTYSLCEVSV TPEGVIKQRR LPDQFSKLAD RIQLSGRYYL KNNMETETLC 840 841 SDEDAQELVK EAQLSMLQLS TIEVATQLSM RDFDLFRNIE PTEYIDDLFK LNSKTGNSHL 900 901 KRFEDIVNQE TFWVASEILT EANQLKRMKI IKHFIKIALH CRECKNFNSM FAIISGLNLA 960 961 SVARLRGTWE KLPSKYEKHL QDLQDIFDPS RNMAKYRNIL SSQSMQPPII PLFPVVKKDM 1020 1021 TFLHEGNDSK VDGLVNFEKL RMISKEIRQV VRMTSANMDP AMMFRQRKKR WRSLGSLSQG 1080 1081 STNSNMLDVQ GGAHKKRARR SSLLNAKKLY EDAQMARKVR QYLSSLDVET DEERFQMMSL 1140 1141 QWEPAYGTLT KNLSEKKSAK SSEMSPVPMR SAGQTSKVHL HQPHRVSQVL QVPAVNLYPI 1200 1201 RKKGQTKDPA LNTSLPQKVL GTTEEISGKK HTEDTISVAS SLHSSPPASP QGSPHKGYTL 1260 1261 TPSAKSDNLS DSSHSEISSR SSIVSNCSVD SMPAALQDER CSTQALVIPE STGALEKTEH 1320 1321 PSGIGDHSQH GPGYTLLKPS LIKCSAVSSS VSSEEISHEH IIIEAADSGR GSWTSCSSSS 1380 1381 HDNFQSLPNP KSWDFLNSYR HTHLDDPIAE VEPTDCEPYS CPKSCSRTCG QCKGSLETNQ 1440 1441 LRKSWASSSS LSDTYEPNYG TVKRRVLEST PTESSEGLDP KDATDTVYKT VTSSTEKGLI 1500 1501 VYCVTSPKKD DRYREPPPTP PGYLGISLAD LKEGPHPHLK PPDYSVAVQR SKMMHNSLSR 1560 1561 LPPASLGCNL VACVPSKIVT QPQRHNLQPS HPKIADVTDA DSEADENEQV SAV 1613 |
Nucleotide CDS Sequence (FASTA) |
1 ATGAACTCAC CCGTGGACCC TGGCGCTAGG CAGGCGTTGA GGAAGAAGCC ACCCGAGCGA 60 61 ACTCCCGAGG ACTTAAATAC TATTTATTCT TATCTTCATG GAATGGAAAT ATTATCAAAT 120 121 CTCAGGGAAC ATCAGCTTAG ATTAATGTCT GCAAGAGCAC GCTATGAGAG ATACAGTGGC 180 181 AATCAGGTTC TCTTTTGTTC AGAAACGATT GCCAGATGTT GGTACATCCT GCTTTCTGGA 240 241 TCTGTGCTTG TGAAAGACTC CATGGTCTTG CCTCCTTGCA GTTTTGGTAA GCAGTTTGGA 300 301 GGAAAAAGAG GATGTGATTG TCTTGTATTA GAGCCTTCAG AAATGATTGT GGTAGAGAAT 360 361 GCCAAAGATA ATGAAGATAG TATTTTACAA AGAGAAATTC CTGCTAGACA ATCTCGAAGA 420 421 AGATTTCGGA AAATTAACTA TAAAGGAGAG CGCCAAACCA TTACTGATGA TGTGGAGGTA 480 481 AACAGCTATC TTTCTCTTCC AGCTGATCTT ACCAAGATGC ATCTCACAGA CAACCCTCAT 540 541 CCACAGGTGA CCCATGTGTC TTCTAGTCAG TCTGGTTGTA GCATTGCCAG TGACTCTGGA 600 601 AGCAGCAGTT TATCTGATAT CTATCAGGCT ACAGAGAGTG AGGTGGGAGA TGTAGATTTG 660 661 ACACGTCTTC CAGAAGGACC TGTTGATTCT GAGGATGACG AAGAGGAAGA TGAAGAGATT 720 721 GACAGAACAG ATCCATTGCA GGGACGAGAT CTTGTTCGAG AATGTCTTGA AAAAGAGCCT 780 781 GCAGACAAAA CTGATGATGA CATTGAACAA TTACTGGAGT TTATGCACCA GCTCCCTGCT 840 841 TTTGCAAACA TGACCATGTC TGTAAGGAGA GAACTCTGCT CGGTGATGAT TTTTGAAGTG 900 901 GTAGAGCAGG CTGGAGCTGT TATTCTTGAA GATGGGCAAG AGCTTGACTC ATGGTATGTT 960 961 ATTTTAAACG GCACTGTAGA AATCAGTCAT CCAGATGGAA AAGTTGAAAA TTTGTTTATG 1020 1021 GGAAATAGTT TTGGAATTAC CCCCACTCTG GATAAGCAGT ACATGCATGG AATTGTCAGG 1080 1081 ACTAAAGTAG ATGATTGTCA GTTTGTCTGC ATAGCCCAGC AAGATTATTG GAGAATTTTA 1140 1141 AATCATGTGG AAAAAAATAC CCATAAAGTT GAGGAAGAGG GAGAAATTGT TATGGTACAT 1200 1201 GAGCATCGTG AACTAGACCG GAGTGGAACC CGGAAAGGAC ACATTGTAAT CAAGGCAACA 1260 1261 CCTGAGCGTC TCATAATGCA TTTAATAGAA GAACATTCTA TTGTGGATCC AACTTATATA 1320 1321 GAAGATTTTC TATTAACTTA TAGGACATTT CTTGAAAGTC CTTTGGATGT TGGAATCAAA 1380 1381 CTTTTGGAAT GGTTTAAGAT CGACAGCTTA AGAGATAAGG TGACGCGGAT TGTATTATTA 1440 1441 TGGGTAAATA ATCATTTTAA TGATTTTGAA GGTGACCCTG CTATGACTCG ATTTCTAGAA 1500 1501 GAATTTGAAA AAAATCTGGA AGATACGAAG ATGAATGGTC ATCTCCGGTT ATTGAATATT 1560 1561 GCCTGTGCTG CAAAGGCTAA GTGGAGACAG GTTGTGCTGC AAAAGGCTTC CCGTGAGTCC 1620 1621 CCTCTACAAT TCAGCCTTAA TGGAGGAAGT GAGAAGGGAT TTGGTATTTT CATTGAAGGA 1680 1681 GTAGAACCTG GGAGCAAAGC CGCTGATTCA GGACTGAAAC GTGGTGATCA GATTATGGAA 1740 1741 GTGAATGGAC AAAACTTTGA GAATATTACA TTTATGAAAG CCCTTGAAAT TTTGAGGAAT 1800 1801 AATACTCATC TTGCACTTAC TGTAAAGACC AACATTTTTG TGTTCAAAGA GTTACTTTGT 1860 1861 AGGACTGAAC AAGAGAAATC TGGTGTGCCT CATATTCCAA AAATTGCTGA AAAAAAAAGT 1920 1921 AATCGCCATT CTATCCAGCA TCTTCCAGGA GATATTGAAC AGGCATCACA AGAGAAAGGA 1980 1981 AGTAAGAAAG TTAAAGCAAA TACTGTTTCA GGTGGAAGAA ACAAAATCAG GAAGATATTG 2040 2041 GATAAAACAC GATTTAGTAT CTTGCCTCCA AAACTATTTA GTGATGGAGG CCTAAGCCAA 2100 2101 TCACAAGATG ACAGCATTGT GGGAACAAGG CACTGTAGGC ATAGTCTGGC TATAATGCCC 2160 2161 ATTCCTGGAA CACTTTCATC CAGCAGCCCT GATCTCCTGC AGCCTACCAC CAGTATGTTG 2220 2221 GATTTTTCCA ATCCTTCAGA TATTCCTGAT CAAGTTATAA GAGTTTTCAA AGCGGATCAG 2280 2281 CAAAGTTGCT ACATTATTAT CAGTAAAGAC ACTACAGCTA AAGAAGTGGT TTGTCATGCT 2340 2341 GTTCATGAAT TTGGTTTGAC CGGTGCATCC GACACATATT CTCTCTGTGA AGTTTCTGTT 2400 2401 ACTCCTGAGG GTGTCATAAA ACAGAGAAGA CTTCCAGATC AGTTCTCCAA ATTAGCTGAT 2460 2461 AGAATTCAAC TCAGTGGAAG GTATTATTTA AAAAATAATA TGGAAACAGA AACCTTATGT 2520 2521 TCAGATGAAG ATGCTCAAGA ACTAGTTAAG GAAGCCCAGC TATCCATGCT GCAGCTCAGT 2580 2581 ACCATTGAGG TGGCCACCCA GCTGTCAATG AGGGATTTTG ATTTGTTTCG TAATATTGAG 2640 2641 CCAACTGAGT ACATCGATGA CCTTTTTAAG TTAAATTCCA AAACAGGAAA TAGTCACTTG 2700 2701 AAGAGGTTTG AGGACATTGT AAACCAAGAG ACATTCTGGG TTGCCTCAGA AATTTTAACT 2760 2761 GAAGCAAATC AACTCAAACG AATGAAGATT ATTAAGCATT TTATTAAAAT TGCACTTCAT 2820 2821 TGTCGAGAAT GTAAGAACTT CAATTCCATG TTTGCAATAA TAAGTGGCTT GAACCTGGCA 2880 2881 TCTGTAGCAC GACTCAGAGG TACTTGGGAA AAGTTACCAA GCAAATATGA GAAACATCTT 2940 2941 CAAGATCTAC AAGACATTTT TGATCCATCT AGAAACATGG CAAAGTATAG AAATATTCTT 3000 3001 AGTAGTCAAA GTATGCAGCC TCCAATTATT CCACTCTTCC CTGTTGTCAA GAAAGATATG 3060 3061 ACATTTCTAC ATGAGGGAAA TGACTCCAAA GTAGATGGTT TAGTAAACTT TGAGAAGTTA 3120 3121 AGAATGATTT CCAAGGAAAT CCGCCAAGTT GTTCGAATGA CTTCTGCTAA CATGGACCCA 3180 3181 GCCATGATGT TTCGACAGAG GAAGAAGAGG TGGCGGAGTC TGGGATCACT GAGTCAAGGA 3240 3241 AGCACAAATT CGAACATGCT GGATGTTCAG GGAGGTGCTC ACAAAAAAAG GGCACGCCGC 3300 3301 AGCTCTCTCC TTAATGCCAA GAAGCTGTAT GAGGATGCGC AAATGGCAAG GAAGGTGAGG 3360 3361 CAGTATCTTT CTAGTCTGGA TGTGGAGACA GATGAGGAGA GGTTCCAGAT GATGTCATTA 3420 3421 CAGTGGGAGC CTGCATATGG TACCTTGACC AAGAATTTAA GTGAGAAAAA ATCAGCCAAA 3480 3481 TCATCTGAAA TGTCTCCAGT GCCTATGAGA TCAGCTGGCC AAACAAGTAA AGTCCACTTG 3540 3541 CATCAACCCC ACAGAGTAAG CCAGGTGCTT CAGGTGCCAG CTGTTAATTT GTACCCCATC 3600 3601 AGGAAGAAGG GACAAACAAA AGACCCTGCA TTGAATACAA GTTTACCTCA GAAAGTTTTA 3660 3661 GGAACAACTG AAGAAATAAG TGGTAAGAAG CATACAGAAG ACACTATTTC TGTGGCATCA 3720 3721 TCTTTACATT CTAGTCCTCC TGCATCTCCT CAAGGTTCCC CTCACAAAGG TTACACACTT 3780 3781 ACTCCATCAG CTAAATCTGA CAACTTGTCT GACTCCAGCC ATAGTGAGAT TTCTTCACGG 3840 3841 TCCAGCATCG TAAGCAATTG TTCTGTTGAC TCTATGCCTG CAGCTCTACA GGATGAACGG 3900 3901 TGTTCCACTC AGGCCCTGGT AATCCCTGAA TCCACTGGGG CATTGGAAAA GACAGAGCAC 3960 3961 CCTTCAGGGA TAGGAGATCA TAGTCAGCAT GGCCCTGGGT ATACACTCTT GAAGCCATCT 4020 4021 CTAATCAAGT GTTCAGCTGT CTCATCGTCT GTGAGCAGTG AAGAGATTTC TCATGAGCAT 4080 4081 ATCATCATAG AAGCAGCTGA CAGTGGTCGT GGAAGTTGGA CTTCGTGTTC AAGCAGCTCC 4140 4141 CATGACAACT TCCAAAGCCT TCCAAACCCA AAAAGCTGGG ATTTTTTGAA CTCTTACAGA 4200 4201 CATACCCATT TGGATGACCC CATTGCTGAA GTTGAACCCA CTGACTGTGA GCCCTATTCC 4260 4261 TGTCCTAAAA GCTGCTCTAG AACTTGTGGG CAGTGTAAAG GAAGCCTAGA GACAAATCAG 4320 4321 TTGAGAAAGA GTTGGGCCTC CTCCAGTTCT CTGTCTGACA CGTATGAACC AAACTATGGG 4380 4381 ACAGTTAAAC GGAGAGTATT GGAGAGCACC CCAACCGAGT CATCTGAAGG CTTAGACCCC 4440 4441 AAGGATGCCA CTGACACAGT TTACAAAACT GTCACATCAA GTACAGAAAA GGGCTTGATT 4500 4501 GAAAATGAAC AAGTTTCAGC AGTCTAG 4527 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Aon-1574 | Aotus nancymaae | 98.51 | 0.0 | 2979 |
LLPS-Gog-3303 | Gorilla gorilla | 98.22 | 0.0 | 1842 |
LLPS-Mal-3419 | Mandrillus leucophaeus | 97.58 | 0.0 | 2940 |
LLPS-Cea-4025 | Cercocebus atys | 97.58 | 0.0 | 2943 |
LLPS-Paa-1008 | Papio anubis | 97.52 | 0.0 | 2939 |
LLPS-Maf-0048 | Macaca fascicularis | 97.46 | 0.0 | 2937 |
LLPS-Man-2423 | Macaca nemestrina | 97.45 | 0.0 | 2922 |
LLPS-Chs-1779 | Chlorocebus sabaeus | 97.27 | 0.0 | 2933 |
LLPS-Nol-3968 | Nomascus leucogenys | 97.21 | 0.0 | 2928 |
LLPS-Hos-1215 | Homo sapiens | 97.21 | 0.0 | 2930 |
LLPS-Pat-2416 | Pan troglodytes | 97.21 | 0.0 | 2929 |
LLPS-Pap-4276 | Pan paniscus | 97.21 | 0.0 | 2930 |
LLPS-Dio-1131 | Dipodomys ordii | 96.73 | 0.0 | 1066 |
LLPS-Poa-3643 | Pongo abelii | 96.53 | 0.0 | 2894 |
LLPS-Caf-3973 | Canis familiaris | 94.42 | 0.0 | 2861 |
LLPS-Urm-1456 | Ursus maritimus | 94.3 | 0.0 | 2859 |
LLPS-Fec-1271 | Felis catus | 94.3 | 0.0 | 2853 |
LLPS-Aim-2828 | Ailuropoda melanoleuca | 94.24 | 0.0 | 2853 |
LLPS-Otg-3194 | Otolemur garnettii | 94.01 | 0.0 | 2804 |
LLPS-Loa-3336 | Loxodonta africana | 93.87 | 0.0 | 2830 |
LLPS-Ict-2155 | Ictidomys tridecemlineatus | 93.8 | 0.0 | 2838 |
LLPS-Sus-2130 | Sus scrofa | 93.7 | 0.0 | 2840 |
LLPS-Myl-0899 | Myotis lucifugus | 93.43 | 0.0 | 2841 |
LLPS-Mup-3773 | Mustela putorius furo | 93.2 | 0.0 | 2823 |
LLPS-Cas-3949 | Carlito syrichta | 93.06 | 0.0 | 2809 |
LLPS-Bot-0387 | Bos taurus | 92.97 | 0.0 | 2787 |
LLPS-Ova-2191 | Ovis aries | 92.45 | 0.0 | 2761 |
LLPS-Mea-2560 | Mesocricetus auratus | 91.88 | 0.0 | 2778 |
LLPS-Eqc-2184 | Equus caballus | 91.64 | 0.0 | 2820 |
LLPS-Cap-3381 | Cavia porcellus | 91.57 | 0.0 | 2725 |
LLPS-Mum-4505 | Mus musculus | 91.44 | 0.0 | 2757 |
LLPS-Ran-0254 | Rattus norvegicus | 90.83 | 0.0 | 2724 |
LLPS-Meg-3051 | Meleagris gallopavo | 82.61 | 0.0 | 2419 |
LLPS-Mod-2267 | Monodelphis domestica | 82.05 | 0.0 | 2454 |
LLPS-Anp-2560 | Anas platyrhynchos | 81.83 | 0.0 | 2417 |
LLPS-Gaga-3381 | Gallus gallus | 80.61 | 0.0 | 2315 |
LLPS-Fia-2379 | Ficedula albicollis | 79.82 | 0.0 | 2407 |
LLPS-Anc-2989 | Anolis carolinensis | 78.31 | 0.0 | 2374 |
LLPS-Lac-4007 | Latimeria chalumnae | 75.68 | 0.0 | 1971 |
LLPS-Scm-0249 | Scophthalmus maximus | 75.41 | 0.0 | 1812 |
LLPS-Xet-2684 | Xenopus tropicalis | 75.34 | 0.0 | 2122 |
LLPS-Scf-0553 | Scleropages formosus | 75.08 | 0.0 | 1822 |
LLPS-Leo-0471 | Lepisosteus oculatus | 75.06 | 0.0 | 1802 |
LLPS-Orn-2514 | Oreochromis niloticus | 74.86 | 0.0 | 1783 |
LLPS-Xim-0428 | Xiphophorus maculatus | 73.7 | 0.0 | 1776 |
LLPS-Orl-0675 | Oryzias latipes | 73.19 | 0.0 | 1753 |
LLPS-Ten-1247 | Tetraodon nigroviridis | 68.45 | 0.0 | 1694 |
LLPS-Pof-1906 | Poecilia formosa | 67.08 | 0.0 | 1846 |
LLPS-Orc-3237 | Oryctolagus cuniculus | 37.5 | 4e-08 | 59.3 |
LLPS-Mam-3801 | Macaca mulatta | 37.04 | 7e-08 | 58.2 |
LLPS-Rhb-3892 | Rhinopithecus bieti | 37.04 | 7e-08 | 58.2 |
LLPS-Sah-0843 | Sarcophilus harrisii | 37.04 | 1e-07 | 57.8 |
LLPS-Fud-3786 | Fukomys damarensis | 36.25 | 5e-08 | 58.5 |
LLPS-Ora-2988 | Ornithorhynchus anatinus | 35.39 | 9e-20 | 100 |
LLPS-Tag-2175 | Taeniopygia guttata | 35.11 | 2e-08 | 59.7 |
LLPS-Tut-1647 | Tursiops truncatus | 35.0 | 7e-08 | 58.2 |
LLPS-Icp-4204 | Ictalurus punctatus | 34.83 | 2e-19 | 99.8 |
LLPS-Mel-1234 | Melampsora laricipopulina | 34.65 | 2e-26 | 119 |
LLPS-Cii-1612 | Ciona intestinalis | 34.62 | 3e-14 | 78.6 |
LLPS-Pes-2790 | Pelodiscus sinensis | 34.44 | 2e-19 | 100 |
LLPS-Dar-1776 | Danio rerio | 34.27 | 2e-19 | 99.8 |
LLPS-Drm-2211 | Drosophila melanogaster | 32.28 | 1e-18 | 97.1 |
LLPS-Lem-0425 | Leptosphaeria maculans | 32.05 | 3e-18 | 95.9 |
LLPS-Crn-0074 | Cryptococcus neoformans | 32.0 | 3e-22 | 108 |
LLPS-Cis-2033 | Ciona savignyi | 31.61 | 3e-16 | 85.1 |
LLPS-Phn-1165 | Phaeosphaeria nodorum | 31.43 | 8e-18 | 94.4 |
LLPS-Cae-0531 | Caenorhabditis elegans | 31.4 | 3e-16 | 89.4 |
LLPS-Fuv-0807 | Fusarium verticillioides | 31.34 | 1e-22 | 110 |
LLPS-Abg-1546 | Absidia glauca | 31.22 | 3e-26 | 122 |
LLPS-Pug-1028 | Puccinia graminis | 30.81 | 2e-22 | 109 |
LLPS-Ast-1255 | Aspergillus terreus | 29.32 | 3e-20 | 99.0 |
LLPS-Scc-1518 | Schizosaccharomyces cryophilus | 29.2 | 3e-22 | 108 |
LLPS-Pytr-1321 | Pyrenophora triticirepentis | 28.43 | 2e-13 | 80.1 |
LLPS-Blg-0225 | Blumeria graminis | 27.75 | 9e-19 | 97.8 |
LLPS-Asni-0271 | Aspergillus niger | 27.68 | 6e-18 | 94.0 |
LLPS-Scj-0622 | Schizosaccharomyces japonicus | 26.54 | 1e-18 | 97.4 |