LLPS-Cae-2031
spd-1
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | SPD-1 |
| Gene Name: | spd-1, CELE_Y34D9A.4, Y34D9A.4 |
| Ensembl Gene: | WBGene00004952 |
| Ensembl Protein: | Y34D9A.4 |
| Organism: | Caenorhabditis elegans |
| Taxa ID: | 6239 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| PcG body | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | Y34D9A.4 | Y34D9A.4 |
| UniProt | G5ED58, G5ED58_CAEEL | |
| GeneBank | AY714241, BX284601 | CCD68051.1, AAV68307.1 |
| RefSeq | NM_058408.4 | NP_490809.2 |
| Entrez | 171683 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MSRRHSVVDA YSTVEGKIRD TMRELSALWD EVDMSEAMRL KRVDNAFTHI TLLCDDMLSG 60 61 EKEMIHNLKV SIREDMQNVK KMRLELEMED FQRPAEIKDG SIALMRHLQS EVKSLETEFQ 120 121 TRHEDQRVLI EKICNLKKRL ESDFEFEYEI HALFPVKAFE KYSASCSEME ELLKHRYHQI 180 181 ERLQTDISQW KSMAQNVADY IGGDDDLKNL LEKNIDSPEF VFSERLLDSL QSYHSELEPL 240 241 YKHWLEDIEF RWTEKHQQLQ ELWEKCLVSE ADRHYSPIFE PTKNSEQTLK RMEDECDRLE 300 301 KKYEACRIVF ELVDKWRAVW TEKLTIDEKR KQPNYYKTTN VLPDNKRERE LLNQMPVLER 360 361 KIDSAHRKYG NEHDGEQISI QGMAPLEYVR FVQEEHKREL KFELQLKKEE KTRMQSPTPT 420 421 RTPRTQKRAM FRTPMSTAKM EPVAKKLNFD TDLPPCMSPA TSEMISFITP TRRQAVGPKT 480 481 SSPKDTQPST SSSSRTTTPM SKRAMTPSSI ASSTPSSAKK VLTRRNQFL 529 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGTCCCGAA GGCACAGCGT CGTTGACGCG TACTCAACTG TAGAAGGAAA GATTCGCGAC 60 61 ACGATGCGAG AACTCTCAGC GTTATGGGAT GAGGTGGACA TGTCGGAAGC AATGAGGCTC 120 121 AAGCGTGTCG ACAACGCGTT CACGCACATA ACGCTTCTCT GTGATGATAT GCTATCCGGC 180 181 GAGAAGGAGA TGATCCACAA TCTGAAGGTC AGCATTCGCG AGGACATGCA AAATGTCAAA 240 241 AAGATGCGGC TCGAGCTGGA AATGGAGGAT TTTCAGCGGC CCGCCGAGAT AAAGGACGGC 300 301 TCGATCGCCT TGATGAGACA TTTGCAGTCG GAAGTGAAAA GTTTGGAGAC AGAATTCCAG 360 361 ACGAGACACG AGGATCAGCG TGTGCTCATC GAGAAGATCT GCAATTTGAA GAAGCGGTTG 420 421 GAGTCGGATT TCGAATTCGA ATATGAGATT CATGCGCTCT TCCCAGTAAA GGCGTTCGAG 480 481 AAGTACTCGG CAAGCTGCAG TGAGATGGAG GAGCTCCTCA AACACCGCTA CCACCAAATC 540 541 GAGCGTCTCC AGACCGACAT CTCGCAGTGG AAGAGTATGG CGCAGAATGT GGCCGACTAT 600 601 ATCGGCGGGG ATGATGATTT GAAGAATTTG CTGGAGAAGA ACATCGATTC CCCGGAATTT 660 661 GTGTTCTCTG AGCGGCTTTT GGACTCGTTG CAGTCTTACC ACAGCGAGCT GGAGCCGCTT 720 721 TACAAGCATT GGCTGGAAGA TATCGAGTTC CGATGGACCG AGAAGCATCA GCAACTTCAG 780 781 GAGCTTTGGG AGAAATGTCT CGTATCGGAA GCAGATCGAC ATTATTCGCC GATTTTCGAG 840 841 CCAACCAAAA ACTCGGAGCA AACCCTAAAG CGGATGGAGG ACGAGTGTGA CCGCCTGGAG 900 901 AAGAAGTACG AAGCGTGCCG AATCGTGTTC GAGCTTGTCG ACAAGTGGAG AGCCGTGTGG 960 961 ACCGAGAAGC TCACGATCGA CGAGAAGCGG AAGCAGCCGA ACTACTACAA GACGACAAAC 1020 1021 GTGCTGCCGG ATAACAAGCG AGAACGCGAG CTGCTCAACC AGATGCCAGT GCTCGAGCGG 1080 1081 AAAATCGACT CGGCGCACCG AAAATACGGC AATGAGCACG ACGGCGAGCA GATTTCGATC 1140 1141 CAGGGAATGG CGCCGTTGGA GTACGTGCGT TTCGTGCAGG AGGAGCACAA ACGCGAGCTG 1200 1201 AAATTCGAGC TTCAGCTCAA GAAGGAGGAG AAGACGCGGA TGCAGTCGCC GACGCCGACC 1260 1261 CGTACGCCTC GCACACAGAA GAGAGCCATG TTTAGGACGC CGATGTCGAC GGCGAAGATG 1320 1321 GAGCCCGTGG CTAAAAAGCT AAACTTCGAC ACGGATCTAC CGCCATGTAT GTCTCCCGCC 1380 1381 ACATCCGAAA TGATCAGCTT CATCACACCG ACCAGAAGAC AAGCCGTCGG CCCGAAAACC 1440 1441 TCGTCGCCAA AGGACACACA GCCCTCCACC TCCTCCTCAT CCCGAACGAC GACTCCGATG 1500 1501 TCGAAACGGG CGATGACGCC GTCCTCAATC GCCTCATCGA CGCCGTCATC CGCTAAGAAA 1560 1561 GTGCTGACGA GACGAAATCA GTTTTTGTGA 1590 |
▼ ANNOTATION
| Disorder | ||||
| IUPred2A | ||||
| PTM | ||||
| EPSD | ||||
| Physicochemical | ||||
| Compute pI/Mw | AAindex | |||
| Localization | ||||
| COMPARTMENTS | ||||
| Element | ||||
| RAID | microRNA.org | |||
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Gaa-0184 | Gasterosteus aculeatus | 28.89 | 8e-06 | 52.8 |
| LLPS-Aon-0079 | Aotus nancymaae | 28.36 | 6e-06 | 53.1 |
| LLPS-Orl-1707 | Oryzias latipes | 28.18 | 1e-05 | 52.4 |
| LLPS-Asm-2010 | Astyanax mexicanus | 25.77 | 1e-06 | 55.8 |
| LLPS-Pof-1923 | Poecilia formosa | 24.58 | 2e-12 | 73.9 |
| LLPS-Lac-2420 | Latimeria chalumnae | 24.38 | 2e-13 | 77.4 |
| LLPS-Xim-3661 | Xiphophorus maculatus | 24.09 | 2e-11 | 70.9 |
| LLPS-Leo-3522 | Lepisosteus oculatus | 23.46 | 2e-09 | 64.3 |
| LLPS-Icp-3028 | Ictalurus punctatus | 22.48 | 3e-09 | 63.9 |
| LLPS-Scm-3254 | Scophthalmus maximus | 22.32 | 2e-10 | 67.8 |
| LLPS-Scf-0475 | Scleropages formosus | 22.12 | 3e-07 | 57.4 |
| LLPS-Orn-3866 | Oreochromis niloticus | 21.86 | 4e-09 | 63.5 |
| LLPS-Tar-2439 | Takifugu rubripes | 21.78 | 3e-11 | 70.1 |