DrLLPS - Data resource of LLPS

LLPS-Cae-1733
rsp-8

▼ OVERVIEW


Status:	Unreviewed
Protein Name:	SR Protein (Splicing factor)
Gene Name:	rsp-8, C18D11.4, CELE_C18D11.4
Ensembl Gene:	WBGene00004705
Ensembl Protein:	C18D11.4a.2
Organism:	Caenorhabditis elegans
Taxa ID:	6239
LLPS Type:	Others

▼ PROPERTY

——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:

Condensate	Evidence	Orthologs
Nuclear speckle, Nucleolus, P-body, Stress granule, Chromatoid body	Predicted from orthologs	(View)

Organism	DrLLPS ID	UniProt ID	LLPS type	Condensate	Identity	E-value	Score
Homo sapiens	LLPS-Hos-1744	P62995	Client	Nuclear speckle, P-body, Stress granule	55.56	5e-30	120
Drosophila melanogaster	LLPS-Drm-0164	P19018	Client	Stress granule	46.94	3e-26	109
Mus musculus	LLPS-Mum-0328	P62996	Client	Nuclear speckle, Chromatoid body	55.56	5e-30	120
Rattus norvegicus	LLPS-Ran-0745	P62997	Client	Nucleolus	55.56	5e-30	120

▼ CROSS REFERENCE

Database	Nucleotide ID	Protein ID
Ensembl	C18D11.4a.2	C18D11.4a.2
Ensembl	C18D11.4a.1	C18D11.4a.1
Ensembl	C18D11.4b	C18D11.4b
UniProt		Q9XTZ2, Q9XTZ2_CAEEL
GeneBank	BX284603	CAB07322.1
RefSeq	NM_001268213.1	NP_001255142.1
Entrez	176613

▼ SEQUENCE

Protein Sequence (FASTA)
1 MGHRSRSNSR SQSRSRENSR GRSRSASKSP VYHRRERESS RSRSPRARYG GGGGGGGGGG 60 61 RGRNQQYDRE NPQPSKCLGV FNLSSYTTEK DLRDVFGEFG EINKCDLVYD RPSGNSRGFG 120 121 FIYFNLIEDA TAARDKLCNT DLDGHKIRVD FSLTKRGHSP TPGQYMGDRR GGGSSGGGRF 180 181 GGGGGDRFND RGSRGGDRYG GDRRGGGGGG GGDRYGGGGG DRYGGDRYGG GGGRRGSPDR 240 241 RGGFRSGGGG GGYMRSGGGG GGPDRRDHRD NDRNGGGGGH RPYDPSFRRR VESYGSGNSG 300 301 GGGGRRDRY 309
Nucleotide CDS Sequence (FASTA)
1 ATGGGCCATC GTTCGCGTAG CAATAGCAGA TCGCAATCAC GTTCTCGAGA GAATTCTCGT 60 61 GGACGCTCCA GATCGGCTTC AAAGTCACCA GTATATCATC GCAGGGAACG CGAGAGCTCC 120 121 CGTTCCCGTT CTCCACGTGC TCGATACGGA GGTGGTGGTG GTGGCGGTGG CGGTGGTGGC 180 181 CGCGGCCGTA ACCAACAGTA TGATCGTGAA AATCCACAGC CATCAAAGTG CCTCGGAGTA 240 241 TTCAATCTGT CTTCGTACAC AACTGAAAAA GACTTGCGCG ACGTGTTCGG CGAGTTTGGA 300 301 GAGATTAACA AGTGCGATCT GGTCTACGAT CGTCCATCGG GAAATTCACG TGGATTCGGC 360 361 TTCATTTACT TTAATTTGAT TGAGGATGCG ACAGCGGCGA GGGATAAGCT GTGCAATACA 420 421 GATTTGGATG GTCATAAGAT TCGCGTCGAC TTTTCCTTGA CAAAACGCGG CCATTCACCA 480 481 ACTCCTGGGC AATACATGGG AGATCGTCGT GGTGGAGGCA GCAGCGGTGG CGGTCGATTC 540 541 GGCGGTGGCG GAGGAGATCG ATTCAACGAT CGAGGATCTC GTGGTGGTGA TCGCTATGGT 600 601 GGAGATCGTC GTGGTGGCGG CGGCGGCGGC GGTGGTGATC GGTACGGTGG AGGTGGTGGA 660 661 GATCGTTATG GAGGTGATCG ATATGGTGGT GGTGGTGGAC GTAGAGGTTC TCCGGACAGA 720 721 CGTGGCGGAT TCCGTAGTGG AGGCGGCGGT GGTGGATACA TGAGAAGCGG TGGCGGTGGA 780 781 GGAGGACCAG ATCGTCGTGA TCATCGAGAC AACGATCGAA ACGGTGGAGG TGGTGGACAC 840 841 CGTCCGTATG ATCCATCGTT CAGACGTCGC GTCGAATCGT ACGGATCTGG AAATAGCGGT 900 901 GGTGGCGGCG GACGTCGTGA TAGATATTAA 930

▼ ANNOTATION

Disorder
IUPred2A

Domain
SMART	CDD	Gene3D

PTM
EPSD	dbPTM

Interaction
HINT	Mentha	PINA	IID	iRefIndex
MIST

Drug
CTD

Physicochemical
Compute pI/Mw	AAindex

Function
ENPD

Localization
COMPARTMENTS

Element
circBase	RAID	microRNA.org

▼ ORTHOLOGY

DrLLPS ID	Organism	Identity	E-value	Score
LLPS-Fia-0155	Ficedula albicollis	56.57	9e-31	122
LLPS-Meg-0885	Meleagris gallopavo	56.57	1e-30	122
LLPS-Anp-1405	Anas platyrhynchos	56.57	1e-30	122
LLPS-Gaga-0406	Gallus gallus	56.57	1e-30	122
LLPS-Tag-1738	Taeniopygia guttata	56.57	9e-31	122
LLPS-Mea-0932	Mesocricetus auratus	56.25	2e-30	119
LLPS-Pes-2147	Pelodiscus sinensis	55.56	2e-30	121
LLPS-Otg-2985	Otolemur garnettii	55.56	3e-30	121
LLPS-Rhb-2275	Rhinopithecus bieti	55.56	3e-30	121
LLPS-Orn-2058	Oreochromis niloticus	55.56	4e-29	118
LLPS-Orc-1823	Oryctolagus cuniculus	55.56	3e-30	121
LLPS-Fec-2126	Felis catus	55.56	3e-30	121
LLPS-Mod-2537	Monodelphis domestica	55.56	3e-30	121
LLPS-Hos-1744	Homo sapiens	55.56	3e-30	121
LLPS-Urm-2120	Ursus maritimus	55.56	3e-30	121
LLPS-Pap-4100	Pan paniscus	55.56	3e-30	121
LLPS-Pat-1395	Pan troglodytes	55.56	3e-30	121
LLPS-Pof-0512	Poecilia formosa	55.56	4e-30	122
LLPS-Loa-1864	Loxodonta africana	55.56	2e-30	121
LLPS-Man-0410	Macaca nemestrina	55.56	3e-30	121
LLPS-Cas-0556	Carlito syrichta	55.56	3e-30	121
LLPS-Xet-0645	Xenopus tropicalis	55.56	2e-30	121
LLPS-Nol-3504	Nomascus leucogenys	55.56	3e-30	121
LLPS-Anc-1000	Anolis carolinensis	55.56	4e-30	120
LLPS-Ict-0892	Ictidomys tridecemlineatus	55.56	3e-30	121
LLPS-Cap-0479	Cavia porcellus	55.56	3e-30	120
LLPS-Eqc-1382	Equus caballus	55.56	3e-30	121
LLPS-Caf-0938	Canis familiaris	55.56	3e-30	121
LLPS-Poa-1793	Pongo abelii	55.56	3e-30	121
LLPS-Mam-2014	Macaca mulatta	55.56	3e-30	121
LLPS-Gog-2177	Gorilla gorilla	55.56	3e-30	121
LLPS-Caj-3129	Callithrix jacchus	55.56	3e-30	121
LLPS-Fud-2180	Fukomys damarensis	55.56	3e-30	121
LLPS-Chs-2686	Chlorocebus sabaeus	55.56	3e-30	121
LLPS-Ora-1456	Ornithorhynchus anatinus	55.56	3e-30	121
LLPS-Mum-0328	Mus musculus	55.56	3e-30	121
LLPS-Maf-0208	Macaca fascicularis	55.56	3e-30	121
LLPS-Sus-2409	Sus scrofa	55.56	3e-30	121
LLPS-Cea-0383	Cercocebus atys	55.56	3e-30	121
LLPS-Orl-0917	Oryzias latipes	55.56	2e-30	122
LLPS-Ere-0206	Erinaceus europaeus	55.56	1e-30	121
LLPS-Ran-0745	Rattus norvegicus	55.56	3e-30	121
LLPS-Myl-1997	Myotis lucifugus	55.56	2e-30	121
LLPS-Ova-0759	Ovis aries	55.56	3e-30	121
LLPS-Mup-0329	Mustela putorius furo	55.56	3e-30	121
LLPS-Aim-0326	Ailuropoda melanoleuca	55.56	3e-30	121
LLPS-Paa-1007	Papio anubis	55.56	3e-30	121
LLPS-Mal-0481	Mandrillus leucophaeus	55.56	3e-30	121
LLPS-Tut-0629	Tursiops truncatus	55.56	3e-30	122
LLPS-Bot-1669	Bos taurus	55.56	3e-30	121
LLPS-Gaa-2155	Gasterosteus aculeatus	55.56	1e-29	119
LLPS-Dio-2206	Dipodomys ordii	55.56	3e-30	121
LLPS-Leo-1455	Lepisosteus oculatus	55.1	3e-30	121
LLPS-Scm-2460	Scophthalmus maximus	54.55	5e-29	118
LLPS-Lac-0091	Latimeria chalumnae	54.55	4e-30	120
LLPS-Dar-1272	Danio rerio	54.55	6e-29	117
LLPS-Icp-0008	Ictalurus punctatus	54.55	5e-29	118
LLPS-Sah-1435	Sarcophilus harrisii	54.55	2e-28	115
LLPS-Aon-1262	Aotus nancymaae	54.55	7e-30	120
LLPS-Tar-0395	Takifugu rubripes	54.55	5e-31	120
LLPS-Xim-0248	Xiphophorus maculatus	54.55	2e-30	119
LLPS-Miv-0492	Microbotryum violaceum	53.76	2e-21	95.9
LLPS-Ten-0066	Tetraodon nigroviridis	53.54	2e-29	119
LLPS-Scf-1135	Scleropages formosus	53.54	6e-29	117
LLPS-Crn-1172	Cryptococcus neoformans	53.26	7e-22	97.8
LLPS-Asm-1445	Astyanax mexicanus	52.53	2e-29	116
LLPS-Cii-1241	Ciona intestinalis	52.53	1e-27	114
LLPS-Spr-0338	Sporisorium reilianum	49.47	3e-19	90.1
LLPS-Usm-0354	Ustilago maydis	49.46	9e-20	91.7
LLPS-Pug-0723	Puccinia graminis	48.94	5e-21	94.7
LLPS-Put-0396	Puccinia triticina	47.87	7e-21	94.0
LLPS-Mel-0881	Melampsora laricipopulina	47.87	1e-20	94.0
LLPS-Drm-0164	Drosophila melanogaster	46.94	8e-26	108
LLPS-Sei-2336	Setaria italica	46.48	3e-10	62.4
LLPS-Sol-0925	Solanum lycopersicum	45.71	1e-09	62.0
LLPS-Sot-0121	Solanum tuberosum	45.71	1e-09	62.8
LLPS-Amt-1864	Amborella trichopoda	44.29	1e-09	62.0
LLPS-Ors-1509	Oryza sativa	44.16	6e-10	62.8
LLPS-Org-0120	Oryza glaberrima	44.16	7e-10	62.4
LLPS-Orm-0860	Oryza meridionalis	44.16	7e-10	62.4
LLPS-Orr-1286	Oryza rufipogon	44.16	6e-10	62.8
LLPS-Orgl-2231	Oryza glumaepatula	44.16	9e-10	62.4
LLPS-Fuv-1320	Fusarium verticillioides	43.06	9e-10	60.1
LLPS-Phn-0031	Phaeosphaeria nodorum	42.86	5e-06	52.0
LLPS-Beb-1610	Beauveria bassiana	42.47	3e-10	62.4
LLPS-Map-0533	Magnaporthe poae	42.47	3e-09	59.7
LLPS-Orni-0190	Oryza nivara	42.25	1e-09	60.8
LLPS-Ori-2082	Oryza indica	42.25	1e-09	60.8
LLPS-Orb-0445	Oryza barthii	42.25	1e-09	60.8
LLPS-Lep-1582	Leersia perrieri	42.25	5e-10	61.2
LLPS-Zem-1506	Zea mays	42.17	7e-11	66.2
LLPS-Sob-0700	Sorghum bicolor	42.11	2e-09	60.8
LLPS-Tum-0352	Tuber melanosporum	41.89	1e-10	62.0
LLPS-Fuo-1143	Fusarium oxysporum	41.67	2e-10	61.6
LLPS-Kop-1213	Komagataella pastoris	41.38	4e-09	60.8
LLPS-Hea-2620	Helianthus annuus	41.33	1e-09	61.6
LLPS-Asc-1401	Aspergillus clavatus	41.1	1e-09	59.7
LLPS-Lem-0866	Leptosphaeria maculans	41.1	3e-09	59.3
LLPS-Orp-2347	Oryza punctata	41.03	2e-10	62.8
LLPS-Cogr-1132	Colletotrichum graminicola	40.85	4e-09	58.9
LLPS-Phv-0442	Phaseolus vulgaris	40.45	1e-10	65.1
LLPS-Pytr-0562	Pyrenophora triticirepentis	40.26	4e-06	52.0
LLPS-Pyt-1422	Pyrenophora teres	40.26	2e-08	58.9
LLPS-Glm-2127	Glycine max	40.0	4e-10	63.2
LLPS-Brr-0927	Brassica rapa	39.78	5e-11	67.0
LLPS-Sem-2174	Selaginella moellendorffii	39.78	8e-14	72.0
LLPS-Yal-1493	Yarrowia lipolytica	39.77	4e-12	70.1
LLPS-Brd-1431	Brachypodium distachyon	39.74	5e-10	61.2
LLPS-Php-2401	Physcomitrella patens	39.73	2e-10	62.4
LLPS-Dos-1237	Dothistroma septosporum	39.56	4e-12	70.5
LLPS-Nia-0012	Nicotiana attenuata	39.24	2e-09	62.0
LLPS-Coc-1905	Corchorus capsularis	39.13	6e-10	64.3
LLPS-Met-0775	Medicago truncatula	38.89	9e-10	62.8
LLPS-Vir-1011	Vigna radiata	38.14	8e-11	65.5
LLPS-Abg-0849	Absidia glauca	38.04	7e-13	70.9
LLPS-Hov-1178	Hordeum vulgare	37.97	3e-09	59.3
LLPS-Scj-0351	Schizosaccharomyces japonicus	37.65	9e-10	63.5
LLPS-Gor-1451	Gossypium raimondii	37.63	6e-11	65.1
LLPS-Viv-0725	Vitis vinifera	37.63	2e-10	64.3
LLPS-Fus-0914	Fusarium solani	37.5	5e-10	61.2
LLPS-Via-0046	Vigna angularis	37.5	5e-10	61.2
LLPS-Thc-1479	Theobroma cacao	36.96	1e-09	61.2
LLPS-Tra-2885	Triticum aestivum	36.67	4e-10	63.5
LLPS-Prp-0087	Prunus persica	36.56	1e-09	61.6
LLPS-Cus-0469	Cucumis sativus	36.56	5e-10	62.8
LLPS-Mua-1148	Musa acuminata	36.54	2e-09	61.2
LLPS-Art-0530	Arabidopsis thaliana	36.08	2e-09	60.8
LLPS-Brn-0708	Brassica napus	36.08	2e-09	61.6
LLPS-Scp-0490	Schizosaccharomyces pombe	35.35	1e-11	67.8
LLPS-Mae-0613	Manihot esculenta	35.05	1e-09	60.8
LLPS-Bro-0583	Brassica oleracea	35.05	3e-09	60.8
LLPS-Orbr-0090	Oryza brachyantha	34.78	3e-09	61.2
LLPS-Pot-0289	Populus trichocarpa	34.15	6e-10	60.8
LLPS-Scc-0022	Schizosaccharomyces cryophilus	33.33	1e-09	62.4
LLPS-Mao-1259	Magnaporthe oryzae	31.52	4e-09	61.2
LLPS-Nec-0180	Neurospora crassa	31.52	3e-09	61.6
LLPS-Trr-0853	Trichoderma reesei	30.43	3e-09	60.1

LLPS-Cae-1733rsp-8

Protein Sequence

Nucleotide Sequence

LLPS-Cae-1733
rsp-8