LLPS-Cae-0411
trf-1

▼ OVERVIEW

Status: Unreviewed
Protein Name: TNF Receptor Associated Factor (TRAF) homolog
Gene Name: trf-1, CELE_F45G2.6, F45G2.6
Ensembl Gene: WBGene00006612
Ensembl Protein: F45G2.6
Organism: Caenorhabditis elegans
Taxa ID: 6239
LLPS Type: Others


▼ PROPERTY


——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:
CondensateEvidenceOrthologs
Nucleolus, PML nuclear body, Stress granulePredicted from orthologs(View)

▼ CROSS REFERENCE

DatabaseNucleotide IDProtein ID
EnsemblF45G2.6F45G2.6
UniProtG5EG80, G5EG80_CAEEL
GeneBankAF348168, BX284603CAB07615.2, AAK37546.1
RefSeqNM_067372.4NP_499773.2
Entrez176767

▼ SEQUENCE

Protein Sequence (FASTA)
1     MTSQSVMFKG  GLPADCTCPI  CEQALRDPIK  LNCDHHYCRQ  CFENENRTPG  CAACQTIIQP  60
61    ELCQHDRAKQ  KQILALPVVC  TFESSGCPWD  GQLGTLHDHL  SECTFKSSLK  CEKCGRQFAK  120
121   NDLEKHRAKC  ELNRAVCSFC  NKTIRDSDRE  RHPKTCPQVI  ISCPFQCGLT  DRPRLEIEAH  180
181   CPSCPNVDNV  CPFVPYGCTF  AGGKESIQQH  LSDEPVRHLM  YLCDEITDLK  GTYELMERDM  240
241   GSFNDRQTRI  LSAAETCTEM  FGPQLIWKID  KLQQRTNEAK  SGADTTIFSV  PFMSHRFGYK  300
301   MMACACLFGD  GSSAGKSISL  YVLLLKGEFD  PTLEWPFHRA  IKISLLDQNP  RPEDRVNITY  360
361   VIDPRKLKAN  EKFLARPRGE  RNAAFGSQSF  CSLAILQNYV  KDDKIYVQID  VDRCETLPVQ  420
421   LKSRDAKERK  QMLDAMRAKT  PDVRLHQVRP  VTSQSSSAEL  RV  462
Nucleotide CDS Sequence (FASTA)
1     ATGACTTCTC  AATCGGTAAT  GTTCAAAGGT  GGATTACCAG  CGGACTGTAC  TTGTCCAATA  60
61    TGTGAGCAAG  CACTTCGCGA  TCCGATCAAG  CTGAACTGTG  ATCATCACTA  TTGCCGTCAA  120
121   TGCTTTGAGA  ATGAAAATCG  AACTCCAGGA  TGCGCGGCAT  GCCAAACGAT  CATCCAACCG  180
181   GAGCTGTGTC  AACATGATCG  GGCAAAGCAG  AAGCAAATTT  TGGCTCTTCC  AGTCGTTTGC  240
241   ACTTTTGAGT  CTTCGGGTTG  TCCCTGGGAC  GGACAACTTG  GAACACTTCA  TGATCATTTA  300
301   TCGGAGTGTA  CATTCAAATC  ATCGTTGAAA  TGCGAAAAGT  GTGGACGACA  ATTCGCAAAG  360
361   AACGATTTGG  AGAAACATCG  AGCGAAGTGT  GAACTGAATC  GAGCTGTCTG  CTCATTTTGT  420
421   AACAAGACCA  TCCGAGATAG  TGACCGTGAG  AGGCATCCAA  AGACCTGTCC  TCAAGTTATC  480
481   ATCAGCTGCC  CATTCCAGTG  CGGTCTCACC  GACCGCCCAC  GTCTCGAGAT  CGAAGCTCAT  540
541   TGTCCCAGCT  GTCCAAATGT  TGACAACGTG  TGCCCATTTG  TACCATATGG  ATGCACGTTT  600
601   GCAGGAGGAA  AAGAGTCAAT  TCAACAACAT  CTGAGCGACG  AACCAGTTCG  ACATTTGATG  660
661   TACCTCTGTG  ACGAAATTAC  GGATTTGAAG  GGAACCTATG  AGTTGATGGA  GAGGGATATG  720
721   GGATCCTTCA  ATGATCGTCA  GACCAGGATT  TTATCAGCTG  CTGAGACATG  CACCGAGATG  780
781   TTCGGTCCTC  AACTGATATG  GAAAATCGAT  AAGCTTCAAC  AAAGAACTAA  TGAGGCGAAG  840
841   TCCGGAGCCG  ACACGACCAT  TTTCTCGGTG  CCCTTCATGT  CTCATCGATT  TGGTTATAAG  900
901   ATGATGGCTT  GTGCATGTCT  TTTCGGTGAT  GGATCAAGCG  CTGGAAAGTC  AATCTCCTTG  960
961   TACGTGTTGT  TGCTCAAAGG  AGAGTTCGAT  CCAACACTCG  AATGGCCATT  TCATCGAGCA  1020
1021  ATCAAGATAT  CTCTGTTGGA  TCAGAACCCG  CGTCCCGAAG  ATCGTGTAAA  CATCACTTAT  1080
1081  GTCATTGATC  CTCGAAAACT  GAAAGCCAAT  GAGAAGTTCT  TGGCTCGTCC  ACGTGGTGAA  1140
1141  CGTAATGCTG  CTTTTGGATC  TCAGTCCTTC  TGCTCATTGG  CTATATTGCA  GAATTATGTG  1200
1201  AAGGACGACA  AAATCTACGT  TCAAATCGAC  GTGGATCGCT  GTGAGACCCT  TCCAGTTCAG  1260
1261  CTTAAGAGTC  GTGATGCAAA  AGAACGAAAG  CAAATGCTCG  ATGCAATGCG  TGCAAAGACT  1320
1321  CCAGATGTTC  GCCTTCATCA  AGTTCGTCCA  GTCACCAGTC  AATCCAGCTC  TGCGGAGCTC  1380
1381  AGAGTTTGA  1389

▼ ANNOTATION

Disorder
IUPred2A
Interaction
MIST
Physicochemical
AAindex
Element
RAID

▼ ORTHOLOGY

DrLLPS IDOrganismIdentityE-valueScore
LLPS-Anc-3135Anolis carolinensis37.183e-26 115
LLPS-Pes-3666Pelodiscus sinensis35.671e-24 110
LLPS-Tag-1711Taeniopygia guttata35.671e-24 110
LLPS-Aim-2333Ailuropoda melanoleuca34.683e-25 112
LLPS-Cas-3426Carlito syrichta34.11e-26 116
LLPS-Sus-3952Sus scrofa33.162e-24 109
LLPS-Bot-0539Bos taurus33.162e-25 112
LLPS-Ova-2228Ovis aries32.619e-23 105
LLPS-Scm-2436Scophthalmus maximus32.458e-2096.3
LLPS-Orl-1262Oryzias latipes31.792e-1995.1
LLPS-Orn-2824Oreochromis niloticus31.791e-1995.9
LLPS-Icp-1262Ictalurus punctatus31.632e-23 106
LLPS-Eqc-3079Equus caballus31.631e-22 104
LLPS-Caf-3939Canis familiaris31.616e-22 102
LLPS-Sah-2470Sarcophilus harrisii31.129e-22 102
LLPS-Dar-2217Danio rerio30.716e-0651.6
LLPS-Dio-1815Dipodomys ordii30.619e-23 104
LLPS-Mup-3853Mustela putorius furo30.615e-22 103
LLPS-Xet-3761Xenopus tropicalis30.482e-23 106
LLPS-Xim-3492Xiphophorus maculatus30.265e-2097.1
LLPS-Pof-4066Poecilia formosa30.265e-2097.1
LLPS-Anp-1011Anas platyrhynchos30.11e-21 101
LLPS-Abg-0317Absidia glauca30.063e-1375.9
LLPS-Gaa-0665Gasterosteus aculeatus29.822e-1995.1
LLPS-Asm-0590Astyanax mexicanus29.592e-2097.8
LLPS-Ten-2134Tetraodon nigroviridis29.592e-38 148
LLPS-Lac-4018Latimeria chalumnae29.324e-2097.1
LLPS-Scf-3741Scleropages formosus29.087e-0754.3
LLPS-Leo-0071Lepisosteus oculatus28.652e-1170.1
LLPS-Ora-0195Ornithorhynchus anatinus28.424e-29 119
LLPS-Meg-2661Meleagris gallopavo28.088e-0960.1
LLPS-Mod-2326Monodelphis domestica27.984e-48 177
LLPS-Tar-2022Takifugu rubripes27.596e-49 180
LLPS-Mea-2593Mesocricetus auratus27.333e-27 117
LLPS-Fud-1675Fukomys damarensis27.332e-46 173
LLPS-Fuo-0224Fusarium oxysporum27.185e-0962.8
LLPS-Mal-1436Mandrillus leucophaeus27.053e-40 155
LLPS-Pap-2538Pan paniscus27.054e-40 154
LLPS-Poa-0295Pongo abelii27.053e-40 155
LLPS-Gog-4702Gorilla gorilla26.96e-45 169
LLPS-Ran-1650Rattus norvegicus26.91e-26 116
LLPS-Hos-3431Homo sapiens26.95e-45 169
LLPS-Pat-2223Pan troglodytes26.95e-45 169
LLPS-Man-0933Macaca nemestrina26.95e-45 169
LLPS-Cap-3791Cavia porcellus26.95e-46 172
LLPS-Myl-0866Myotis lucifugus26.892e-40 155
LLPS-Rhb-2016Rhinopithecus bieti26.891e-39 154
LLPS-Nol-1548Nomascus leucogenys26.846e-46 171
LLPS-Ere-0543Erinaceus europaeus26.82e-38 149
LLPS-Chs-0256Chlorocebus sabaeus26.685e-45 169
LLPS-Mum-2736Mus musculus26.682e-27 119
LLPS-Maf-0017Macaca fascicularis26.685e-45 169
LLPS-Aon-3327Aotus nancymaae26.688e-45 168
LLPS-Cea-3607Cercocebus atys26.685e-45 169
LLPS-Caj-0109Callithrix jacchus26.688e-45 168
LLPS-Paa-1869Papio anubis26.685e-45 169
LLPS-Fec-3016Felis catus26.684e-45 169
LLPS-Loa-3304Loxodonta africana26.681e-43 165
LLPS-Orc-0711Oryctolagus cuniculus26.684e-45 169
LLPS-Mam-3676Macaca mulatta26.685e-45 169
LLPS-Ict-0963Ictidomys tridecemlineatus26.689e-45 168
LLPS-Fuv-0840Fusarium verticillioides26.679e-0961.6
LLPS-Otg-1809Otolemur garnettii26.462e-44 167
LLPS-Urm-2535Ursus maritimus26.333e-30 126
LLPS-Gaga-3752Gallus gallus26.252e-42 162
LLPS-Cis-0461Ciona savignyi26.093e-0858.2
LLPS-Fia-3319Ficedula albicollis25.972e-37 147
LLPS-Tut-0566Tursiops truncatus25.275e-32 130
LLPS-Cii-0264Ciona intestinalis24.672e-39 153
LLPS-Beb-0195Beauveria bassiana24.489e-0652.0
LLPS-Drm-0060Drosophila melanogaster24.151e-30 127
LLPS-Spr-0943Sporisorium reilianum22.962e-0757.8