LLPS-Brr-2507
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Uncharacterized protein |
| Ensembl Gene: | Bra014420 |
| Ensembl Protein: | Bra014420.1-P |
| Organism: | Brassica rapa |
| Taxa ID: | 51351 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | Bra014420.1 | Bra014420.1-P |
| UniProt | M4DD52, M4DD52_BRARP |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MGAKVQNTLI FSVIVLFVSF SSAASSSQYN TLVVNTLPSS PILSSPESES LTTVSQSTTS 60 61 LSLHLSHVDA ISSFADASPA ELFNLRLKRD SLRVESLTTL AAVSSRRNVT RRAPRSAGGF 120 121 SGAVISGLSQ GSGEYFMRLG VGTPATNMYM VLDTGSDVVW LQCAPCKVCY NQSDAIFDPS 180 181 KSKTFAAVPC GSRLCRRLDD SSECFRQRSK RCLYQVSYGD GSFTVGDLST ETLTFKGARV 240 241 DHVAVGCGHD NEGLFVGAAG LLGLGRGGLS FPSQTKNRYN GKFSYCLVDR TSSGSASKPP 300 301 STIVFGNDAV PKTSVFTPLL TNPKLDTFYY LQLLGISVGG SRVRGVSESQ FKLDATGNGG 360 361 VIIDSGTSVT RLTQSAYVAL RDAFRLGAKR LKRAPSYSLF DTCFDLSGMS TVKVPTVVFH 420 421 FGGGEVSLPA SNYLIPVNTQ GRFCFAFAGT MGSLSIIGNI QQQGFRVAYD LTGSRVGFLP 480 481 RAC 483 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGGAGCAA AAGTCCAAAA CACCCTCATC TTCTCCGTCA TTGTTCTCTT CGTCTCCTTC 60 61 TCCTCCGCCG CTTCTTCCTC CCAATACAAC ACCCTCGTCG TCAACACTCT CCCTTCTTCT 120 121 CCAATCCTCT CATCTCCCGA GTCCGAATCA TTGACCACTG TATCCCAATC CACAACTTCA 180 181 CTCTCACTCC ACCTATCACA CGTCGATGCC ATCTCCTCCT TCGCCGACGC ATCTCCGGCG 240 241 GAGCTCTTCA ACCTCCGTCT CAAAAGAGAC TCTCTCCGCG TCGAGTCCTT GACCACCCTC 300 301 GCCGCCGTCT CTTCCCGCCG GAACGTTACC AGAAGAGCTC CACGCTCCGC CGGTGGGTTC 360 361 AGCGGCGCTG TTATCTCCGG TCTCTCGCAG GGAAGCGGAG AGTATTTCAT GAGGCTCGGC 420 421 GTCGGGACTC CGGCGACGAA CATGTACATG GTCCTCGACA CGGGAAGCGA CGTCGTTTGG 480 481 CTGCAATGCG CTCCTTGCAA AGTGTGTTAC AACCAATCCG ACGCGATCTT CGACCCGTCT 540 541 AAATCCAAAA CGTTCGCCGC CGTCCCGTGC GGTTCTCGTC TCTGTCGGAG ATTGGACGAC 600 601 TCGTCGGAAT GTTTCAGACA GCGAAGCAAG CGTTGTCTCT ACCAAGTCTC GTACGGTGAC 660 661 GGGTCGTTCA CGGTTGGAGA CTTGTCGACC GAAACGCTGA CGTTTAAGGG AGCACGTGTC 720 721 GATCACGTGG CGGTGGGATG CGGTCACGAC AACGAAGGCT TGTTCGTAGG CGCGGCTGGG 780 781 CTGTTGGGCC TGGGCCGCGG AGGGTTATCT TTCCCGTCGC AGACGAAAAA CCGTTATAAC 840 841 GGTAAATTCT CTTACTGTTT GGTGGACCGG ACGAGTTCCG GTTCAGCTTC TAAACCGCCG 900 901 TCGACCATCG TCTTCGGAAA CGACGCCGTT CCGAAAACCT CCGTTTTCAC GCCGCTGCTG 960 961 ACGAACCCGA AGCTCGACAC GTTCTACTAC TTGCAGCTTC TTGGGATCAG CGTCGGCGGG 1020 1021 TCCCGCGTCC GCGGCGTTTC GGAGTCGCAG TTTAAGCTCG ACGCCACCGG GAACGGCGGA 1080 1081 GTTATCATCG ACTCCGGCAC TTCCGTTACT CGGCTGACTC AGTCGGCTTA CGTGGCGCTT 1140 1141 AGAGACGCGT TTCGTCTCGG TGCGAAGAGG CTGAAGCGCG CTCCGTCGTA CTCTCTGTTC 1200 1201 GACACGTGTT TTGACCTCTC CGGGATGTCG ACGGTGAAAG TCCCGACGGT GGTGTTTCAT 1260 1261 TTCGGCGGCG GAGAGGTTTC GCTTCCGGCG AGTAACTATC TGATTCCGGT GAACACTCAA 1320 1321 GGGCGGTTCT GTTTCGCGTT CGCCGGGACG ATGGGGAGCT TGTCGATAAT TGGGAACATA 1380 1381 CAGCAACAAG GTTTCCGGGT CGCTTATGAC TTAACCGGGT CACGGGTTGG GTTTTTACCT 1440 1441 CGCGCGTGTT AG 1452 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Brn-0982 | Brassica napus | 98.76 | 0.0 | 792 |
| LLPS-Bro-2628 | Brassica oleracea | 97.31 | 0.0 | 782 |
| LLPS-Arl-1876 | Arabidopsis lyrata | 90.84 | 0.0 | 696 |
| LLPS-Art-1830 | Arabidopsis thaliana | 90.84 | 0.0 | 696 |
| LLPS-Vir-0103 | Vigna radiata | 71.33 | 2e-180 | 520 |
| LLPS-Via-1508 | Vigna angularis | 71.08 | 2e-179 | 517 |
| LLPS-Phv-1113 | Phaseolus vulgaris | 70.36 | 2e-175 | 511 |
| LLPS-Pot-2326 | Populus trichocarpa | 69.71 | 1e-179 | 520 |
| LLPS-Prp-1821 | Prunus persica | 69.47 | 1e-178 | 517 |
| LLPS-Sot-0488 | Solanum tuberosum | 69.4 | 4e-178 | 516 |
| LLPS-Thc-2193 | Theobroma cacao | 69.19 | 2e-168 | 494 |
| LLPS-Glm-2947 | Glycine max | 69.16 | 1e-173 | 504 |
| LLPS-Sol-0623 | Solanum lycopersicum | 69.16 | 3e-177 | 514 |
| LLPS-Met-0188 | Medicago truncatula | 68.92 | 2e-177 | 514 |
| LLPS-Coc-1207 | Corchorus capsularis | 68.67 | 0.0 | 527 |
| LLPS-Nia-2263 | Nicotiana attenuata | 68.6 | 1e-173 | 505 |
| LLPS-Viv-2050 | Vitis vinifera | 68.46 | 1e-171 | 499 |
| LLPS-Cus-2142 | Cucumis sativus | 68.38 | 5e-173 | 502 |
| LLPS-Mae-2198 | Manihot esculenta | 67.95 | 9e-175 | 507 |
| LLPS-Dac-0773 | Daucus carota | 67.24 | 4e-170 | 496 |
| LLPS-Gor-1709 | Gossypium raimondii | 67.22 | 2e-178 | 517 |
| LLPS-Hea-0602 | Helianthus annuus | 66.99 | 2e-169 | 493 |
| LLPS-Tru-1090 | Triticum urartu | 61.54 | 2e-67 | 227 |
| LLPS-Org-0031 | Oryza glaberrima | 61.1 | 2e-129 | 391 |
| LLPS-Brd-2309 | Brachypodium distachyon | 60.63 | 2e-143 | 427 |
| LLPS-Orm-2067 | Oryza meridionalis | 60.24 | 3e-137 | 412 |
| LLPS-Orgl-0673 | Oryza glumaepatula | 60.1 | 6e-136 | 409 |
| LLPS-Ori-0925 | Oryza indica | 60.1 | 5e-136 | 409 |
| LLPS-Orni-0210 | Oryza nivara | 60.1 | 5e-136 | 409 |
| LLPS-Orr-0468 | Oryza rufipogon | 60.1 | 5e-136 | 409 |
| LLPS-Ors-1550 | Oryza sativa | 60.1 | 5e-136 | 409 |
| LLPS-Orp-1541 | Oryza punctata | 60.0 | 3e-133 | 402 |
| LLPS-Hov-2200 | Hordeum vulgare | 59.9 | 2e-137 | 413 |
| LLPS-Sei-2094 | Setaria italica | 59.86 | 2e-141 | 422 |
| LLPS-Orb-1019 | Oryza barthii | 59.75 | 2e-94 | 296 |
| LLPS-Tra-2541 | Triticum aestivum | 59.66 | 1e-132 | 400 |
| LLPS-Lep-2131 | Leersia perrieri | 59.62 | 7e-136 | 409 |
| LLPS-Zem-2536 | Zea mays | 59.57 | 7e-139 | 416 |
| LLPS-Sob-0693 | Sorghum bicolor | 59.47 | 1e-134 | 406 |
| LLPS-Amt-0201 | Amborella trichopoda | 59.0 | 2e-138 | 414 |
| LLPS-Mua-1012 | Musa acuminata | 58.47 | 3e-136 | 412 |
| LLPS-Sem-1547 | Selaginella moellendorffii | 57.14 | 6e-118 | 357 |
| LLPS-Php-1181 | Physcomitrella patens | 51.04 | 7e-117 | 360 |
| LLPS-Orbr-2340 | Oryza brachyantha | 27.01 | 1e-07 | 58.2 |