LLPS-Brr-2439
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Uncharacterized protein |
| Ensembl Gene: | Bra017400 |
| Ensembl Protein: | Bra017400.1-P |
| Organism: | Brassica rapa |
| Taxa ID: | 51351 |
| LLPS Type: | Others |
▼ PROPERTY
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus, Stress granule | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | Bra017400.1 | Bra017400.1-P |
| UniProt | M4DLL9, M4DLL9_BRARP |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MYSSRGSGYG QQPYGSQSGY PQNLGSNYPG SSVSGGAEGG SQIPLSSRLP SGAPQETDIG 60 61 GGYRSQLSTA SHYGAQYASL YGTASLASSQ PLSTKGVGSS VLDNRSGYVP TLPDSPKYAS 120 121 GSYLSSSAHG YGQKEDDLYS DKLSGYVPVD RRQSSAYLGR ELQNDPAARY ADSSSFGRQT 180 181 DLYDRIDQAS LLRGEQLLKM QSLHTTSADG GVRQADYLTE RSSTVRHSDQ EAMHYGRRLE 240 241 SDPHGLSLHS TSSYASQHTP SLLGAAPRRN LDDYIYMESS SNPGYGVSLP PGRDYGTGKG 300 301 ILTAASLDLD YPGGMLARGG PRVDELRKDD RASYLREFEL REEERRRENL RARDKERERE 360 361 RDRERDRERE REREKEREKQ RARDRERDRI REKEREDERE RDRKRALERK RDRTPTARAT 420 421 SRDPKERTPV PKAVSRDARS SSLRRDAQHR EASIRRPSPV RPIRRDYVCK VLSSRLVDME 480 481 RDYVTLDKRY PRLFLPSEFS KVVVNWPKQK LTLSMHTAVS FEHDYIEDGG VDVKPTPTKS 540 541 SAVKTGGKTV WNAKMILMSG LSRTALEDLS SDKLFEERIP HICNILKFAV LKKDHSLMAT 600 601 GGPWDPTDGM DPSVDQSSLI TTMLRHTKDK LHLDLSNCRH WNPFLEIHYD RVGTDGVSIF 660 661 KEITVLFVPD LSECLPSFDA WRTQWLAHRK VLAERDRLLS QEAKKDVIVG KGSDNAGEVA 720 721 KDAEKKTPGT KKVVKKIVKR VVKRPVNDGK ATDKKDEKPD EKDVPGKVAI SGDNQGESSD 780 781 PSAKGNEQTP SKTIVKKKII KKVAKKKIAE VDNNMDGDLK NNGENDEEKV VEAEKKTPDS 840 841 GSMEMKSPAG KKEESASKIV ETKQKAGSPS TEKKEGASSS TKDIKAGEDK KAEKKDKSEN 900 901 QSEGKKVDEK KAKEKINEKE IKERSGKDES ILQVKDKKKS DEPPRPGFVL QVKRNKDSKL 960 961 RSLSVSLDSL LDYTDKDIDE SSFELSLFAE SMFEMLQYQM GTRILEFLKK LRVKFVRERN 1020 1021 QRKRRQEELS AKEKEAKAQN KRQKTDKEAT VTTESVPEKD DKKNSAKETV ANTEDTKKAT 1080 1081 DDEAATMEAD NQDEEIDEDP EEDPEEDPEE DPEECEEMDD ENPEQEETAE EPQKNEENSE 1140 1141 KTSSAVARPI TEVATDRKEE IVEKTDSKSA EIKPKSESGK HGKQEEGTSD APKKEETVDK 1200 1201 ELLQAFRFFD RNQTGYVRVD DMRTTMHSLG KFLSHREVKE LVLSALLESN TGRDDRILYN 1260 1261 KLVRLSL 1267 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGTATTCCT CAAGGGGGAG TGGCTACGGT CAACAGCCCT ACGGTTCTCA ATCCGGTTAC 60 61 CCTCAGAACC TTGGATCTAA TTATCCGGGG AGTTCAGTCA GTGGCGGGGC AGAAGGGGGA 120 121 TCTCAGATTC CCTTGAGCTC TCGCCTACCT TCAGGTGCTC CTCAGGAGAC TGACATTGGT 180 181 GGTGGGTACA GGTCTCAGTT ATCCACAGCC AGTCATTACG GAGCGCAGTA CGCGTCTCTG 240 241 TATGGAACAG CTTCTCTCGC CAGCTCTCAG CCTTTAAGCA CTAAAGGCGT TGGCTCATCA 300 301 GTCTTGGATA ACCGCTCTGG ATATGTCCCC ACTCTGCCGG ATTCGCCAAA GTATGCTTCT 360 361 GGAAGCTATT TGTCTTCCTC TGCCCATGGT TATGGTCAAA AGGAGGATGA TTTGTATTCG 420 421 GATAAGCTCT CTGGTTACGT TCCGGTTGAT AGAAGGCAGT CAAGTGCTTA TCTCGGTAGG 480 481 GAGTTGCAAA ATGATCCAGC TGCTCGGTAT GCTGATTCAT CTAGCTTTGG TCGTCAGACT 540 541 GATTTGTACG ATCGCATTGA TCAAGCATCA CTCCTCCGCG GAGAACAGTT ACTAAAAATG 600 601 CAGTCGCTCC ATACCACTTC TGCTGATGGA GGTGTCAGAC AAGCCGATTA TCTTACAGAA 660 661 CGAAGTTCTA CTGTACGCCA TTCTGACCAA GAAGCTATGC ATTATGGAAG AAGGCTCGAG 720 721 TCTGATCCTC ATGGGCTATC ACTACACAGC ACGTCTTCTT ATGCCAGCCA ACATACCCCA 780 781 TCGCTATTAG GAGCTGCTCC CCGGCGAAAC TTAGATGACT ATATCTATAT GGAGAGTTCT 840 841 TCAAATCCTG GTTATGGCGT CAGTTTGCCT CCAGGCAGGG ATTATGGTAC TGGGAAAGGC 900 901 ATCCTTACTG CAGCATCTCT GGACTTGGAC TACCCTGGTG GTATGCTAGC TCGTGGTGGT 960 961 CCTCGTGTTG ATGAGCTCCG GAAAGATGAC CGGGCAAGTT ATCTTAGAGA GTTTGAACTA 1020 1021 AGGGAAGAAG AGCGTCGCCG TGAGAACCTG CGTGCCAGAG ATAAGGAGCG AGAACGAGAG 1080 1081 AGGGATCGCG AACGTGATAG AGAGCGAGAA CGAGAGCGGG AGAAGGAACG AGAAAAGCAA 1140 1141 AGAGCTAGGG ACAGAGAAAG GGATCGCATA CGGGAGAAGG AAAGAGAAGA TGAAAGAGAA 1200 1201 CGTGATCGAA AACGCGCTCT CGAAAGAAAA CGTGATCGGA CTCCAACAGC GAGAGCTACG 1260 1261 TCCAGGGACC CAAAGGAGCG GACTCCAGTG CCGAAAGCTG TTTCTAGGGA TGCACGTAGT 1320 1321 TCCTCTTTGC GGCGGGATGC ACAACATCGT GAAGCATCAA TTAGGCGTCC TTCACCAGTT 1380 1381 AGGCCAATAC GGAGAGATTA TGTCTGCAAG GTTTTATCCT CGCGCTTGGT TGACATGGAG 1440 1441 AGGGATTACG TGACACTGGA TAAAAGATAT CCAAGGCTTT TTTTACCTTC TGAGTTTTCC 1500 1501 AAGGTTGTGG TGAACTGGCC GAAACAAAAG CTTACACTTT CGATGCATAC TGCTGTGAGT 1560 1561 TTTGAGCATG ATTACATTGA AGATGGTGGA GTTGATGTGA AACCTACGCC CACAAAGTCT 1620 1621 TCAGCTGTGA AAACTGGAGG AAAGACTGTT TGGAATGCCA AGATGATTTT GATGAGTGGC 1680 1681 CTGAGCAGGA CTGCTCTGGA AGATCTTTCT TCAGATAAAT TATTTGAAGA GCGTATACCT 1740 1741 CATATTTGCA ACATATTAAA GTTTGCTGTT CTTAAAAAAG ATCATTCGTT GATGGCCACT 1800 1801 GGTGGTCCTT GGGATCCCAC AGATGGCATG GACCCATCAG TTGATCAGTC TTCCTTAATC 1860 1861 ACGACAATGC TGAGACACAC AAAGGATAAG CTTCATCTTG ATCTGAGCAA CTGCCGTCAC 1920 1921 TGGAATCCCT TTCTAGAGAT ACATTACGAC AGAGTTGGTA CGGATGGAGT TTCAATCTTC 1980 1981 AAAGAGATCA CTGTACTATT TGTCCCTGAT TTATCAGAAT GTCTTCCTTC ATTTGACGCT 2040 2041 TGGAGAACCC AATGGTTGGC ACACAGGAAA GTTCTTGCTG AGAGAGATAG ACTACTTTCT 2100 2101 CAGGAGGCTA AGAAAGATGT CATTGTAGGA AAGGGAAGTG ATAATGCCGG TGAAGTAGCC 2160 2161 AAGGATGCGG AGAAAAAGAC CCCAGGAACT AAGAAGGTGG TGAAAAAGAT TGTTAAAAGA 2220 2221 GTTGTTAAAA GGCCTGTCAA CGATGGAAAG GCAACTGATA AGAAAGATGA GAAGCCGGAT 2280 2281 GAAAAGGATG TTCCTGGAAA GGTTGCCATT TCAGGTGATA ACCAAGGGGA GAGCTCAGAT 2340 2341 CCTAGTGCTA AGGGTAATGA ACAGACTCCT TCAAAGACAA TCGTAAAGAA AAAAATCATC 2400 2401 AAAAAAGTGG CTAAAAAGAA GATTGCTGAA GTAGACAATA ACATGGACGG TGACTTGAAG 2460 2461 AATAATGGAG AGAATGATGA GGAAAAGGTG GTGGAGGCAG AGAAGAAAAC TCCTGATTCA 2520 2521 GGTAGTATGG AGATGAAATC TCCTGCAGGA AAGAAGGAAG AGAGTGCCTC CAAAATTGTG 2580 2581 GAAACAAAAC AGAAGGCGGG ATCTCCGAGT ACTGAGAAAA AGGAGGGTGC TTCTAGTTCA 2640 2641 ACAAAGGACA TTAAGGCAGG TGAAGATAAG AAGGCTGAAA AGAAAGACAA GTCAGAGAAC 2700 2701 CAATCCGAGG GCAAAAAGGT TGACGAGAAA AAGGCAAAAG AAAAAATTAA CGAGAAAGAG 2760 2761 ATTAAAGAGA GAAGTGGAAA AGATGAGTCC ATACTACAAG TGAAGGACAA GAAAAAGTCT 2820 2821 GACGAACCTC CTCGGCCAGG ATTTGTTCTA CAAGTGAAAC GGAACAAAGA TTCTAAATTG 2880 2881 CGTTCACTTT CGGTCTCCCT GGACTCGCTT TTGGATTACA CTGACAAGGA CATTGATGAG 2940 2941 TCATCATTTG AGCTTTCATT GTTTGCTGAA TCGATGTTCG AGATGCTACA GTATCAAATG 3000 3001 GGTACTCGTA TCTTAGAATT TCTCAAGAAA TTACGTGTAA AATTTGTGAG AGAGAGAAAC 3060 3061 CAACGAAAGA GGCGTCAAGA AGAGTTATCT GCCAAGGAAA AGGAAGCAAA AGCACAAAAT 3120 3121 AAGCGTCAAA AGACTGACAA GGAAGCCACT GTTACAACTG AATCTGTTCC TGAGAAGGAT 3180 3181 GACAAGAAAA ATTCAGCAAA GGAAACGGTA GCTAACACTG AAGACACTAA AAAAGCCACC 3240 3241 GATGATGAAG CTGCTACGAT GGAAGCGGAT AACCAGGATG AAGAGATTGA TGAAGACCCA 3300 3301 GAGGAAGACC CTGAAGAGGA TCCTGAAGAA GACCCTGAGG AATGCGAGGA AATGGACGAT 3360 3361 GAAAATCCTG AGCAAGAAGA AACTGCTGAA GAGCCGCAGA AGAATGAAGA AAACAGTGAG 3420 3421 AAGACTAGCA GCGCTGTTGC TCGTCCTATA ACTGAAGTCG CAACTGATAG AAAAGAAGAG 3480 3481 ATCGTGGAGA AGACTGATTC CAAATCTGCT GAGATCAAAC CCAAGTCGGA GTCAGGCAAG 3540 3541 CACGGGAAGC AAGAGGAAGG AACATCTGAT GCACCAAAAA AAGAAGAAAC GGTTGATAAA 3600 3601 GAGTTGTTGC AGGCTTTCAG ATTCTTTGAT CGTAACCAAA CAGGCTATGT TAGGGTTGAT 3660 3661 GATATGAGAA CAACTATGCA CAGCTTGGGA AAGTTTCTAT CTCACCGAGA AGTCAAGGAG 3720 3721 CTTGTGCTGA GTGCTTTGTT AGAGAGCAAC ACTGGAAGAG ATGATCGGAT TTTATACAAT 3780 3781 AAGCTCGTTA GGCTGTCTTT ATAG 3804 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Bro-1931 | Brassica oleracea | 97.76 | 0.0 | 601 |
| LLPS-Brn-0067 | Brassica napus | 97.76 | 0.0 | 600 |
| LLPS-Art-2549 | Arabidopsis thaliana | 84.52 | 1e-159 | 520 |
| LLPS-Arl-0749 | Arabidopsis lyrata | 82.97 | 2e-152 | 501 |
| LLPS-Viv-2117 | Vitis vinifera | 82.61 | 2e-28 | 128 |
| LLPS-Phv-0298 | Phaseolus vulgaris | 78.08 | 1e-28 | 129 |
| LLPS-Vir-1640 | Vigna radiata | 76.71 | 1e-27 | 125 |
| LLPS-Met-0943 | Medicago truncatula | 75.34 | 5e-27 | 124 |
| LLPS-Glm-1739 | Glycine max | 75.0 | 3e-10 | 69.7 |
| LLPS-Coc-1774 | Corchorus capsularis | 74.03 | 2e-28 | 128 |
| LLPS-Prp-1500 | Prunus persica | 71.26 | 7e-31 | 136 |
| LLPS-Tra-1508 | Triticum aestivum | 66.27 | 2e-06 | 56.6 |
| LLPS-Thc-1296 | Theobroma cacao | 65.76 | 8e-100 | 353 |
| LLPS-Mae-1170 | Manihot esculenta | 64.17 | 2e-09 | 66.6 |
| LLPS-Orp-0174 | Oryza punctata | 63.74 | 1e-07 | 60.8 |
| LLPS-Orm-1577 | Oryza meridionalis | 63.74 | 1e-07 | 60.8 |
| LLPS-Orr-0405 | Oryza rufipogon | 63.74 | 1e-07 | 60.8 |
| LLPS-Orb-1050 | Oryza barthii | 63.74 | 9e-08 | 61.2 |
| LLPS-Ori-2037 | Oryza indica | 63.74 | 1e-07 | 60.8 |
| LLPS-Orni-1387 | Oryza nivara | 63.74 | 1e-07 | 60.8 |
| LLPS-Orgl-0128 | Oryza glumaepatula | 63.74 | 9e-08 | 61.2 |
| LLPS-Gor-1114 | Gossypium raimondii | 63.53 | 1e-93 | 335 |
| LLPS-Sol-1696 | Solanum lycopersicum | 63.33 | 1e-07 | 60.5 |
| LLPS-Nia-1960 | Nicotiana attenuata | 60.95 | 5e-27 | 124 |
| LLPS-Pof-1596 | Poecilia formosa | 32.51 | 1e-15 | 86.7 |
| LLPS-Ten-2287 | Tetraodon nigroviridis | 32.38 | 5e-16 | 88.2 |
| LLPS-Xim-1552 | Xiphophorus maculatus | 32.38 | 2e-15 | 86.3 |
| LLPS-Tar-3249 | Takifugu rubripes | 32.38 | 1e-15 | 86.7 |
| LLPS-Anc-0003 | Anolis carolinensis | 32.17 | 9e-15 | 84.0 |
| LLPS-Icp-0005 | Ictalurus punctatus | 32.05 | 5e-15 | 85.1 |
| LLPS-Asm-0467 | Astyanax mexicanus | 31.78 | 4e-13 | 78.6 |
| LLPS-Dar-4060 | Danio rerio | 31.76 | 3e-15 | 85.5 |
| LLPS-Orn-0530 | Oreochromis niloticus | 31.56 | 2e-14 | 83.2 |
| LLPS-Meg-3114 | Meleagris gallopavo | 31.2 | 9e-15 | 84.0 |
| LLPS-Tag-1410 | Taeniopygia guttata | 31.2 | 3e-15 | 85.9 |
| LLPS-Scm-1006 | Scophthalmus maximus | 31.09 | 2e-14 | 82.8 |
| LLPS-Mod-1775 | Monodelphis domestica | 30.93 | 5e-15 | 84.7 |
| LLPS-Ora-0138 | Ornithorhynchus anatinus | 30.93 | 1e-14 | 83.2 |
| LLPS-Sah-1638 | Sarcophilus harrisii | 30.93 | 5e-15 | 84.7 |
| LLPS-Pes-0579 | Pelodiscus sinensis | 30.87 | 7e-14 | 80.9 |
| LLPS-Gaa-0254 | Gasterosteus aculeatus | 30.74 | 3e-15 | 85.5 |
| LLPS-Gaga-2244 | Gallus gallus | 30.68 | 1e-06 | 57.0 |
| LLPS-Fud-1504 | Fukomys damarensis | 30.64 | 3e-14 | 82.4 |
| LLPS-Anp-2094 | Anas platyrhynchos | 30.51 | 6e-15 | 84.7 |
| LLPS-Fia-2692 | Ficedula albicollis | 30.51 | 4e-15 | 85.1 |
| LLPS-Loa-1323 | Loxodonta africana | 30.21 | 2e-14 | 83.2 |
| LLPS-Otg-1529 | Otolemur garnettii | 30.21 | 2e-14 | 82.8 |
| LLPS-Mum-4346 | Mus musculus | 30.21 | 6e-14 | 81.3 |
| LLPS-Sus-0101 | Sus scrofa | 30.21 | 2e-14 | 83.2 |
| LLPS-Ran-2639 | Rattus norvegicus | 30.21 | 4e-14 | 82.0 |
| LLPS-Scf-1536 | Scleropages formosus | 30.13 | 3e-13 | 79.3 |
| LLPS-Pap-0256 | Pan paniscus | 30.08 | 2e-14 | 82.8 |
| LLPS-Urm-0505 | Ursus maritimus | 30.08 | 1e-13 | 80.5 |
| LLPS-Pat-3176 | Pan troglodytes | 30.08 | 2e-14 | 82.8 |
| LLPS-Hos-1423 | Homo sapiens | 30.08 | 2e-14 | 82.8 |
| LLPS-Fec-3783 | Felis catus | 30.08 | 2e-14 | 82.8 |
| LLPS-Man-3960 | Macaca nemestrina | 30.08 | 2e-14 | 82.8 |
| LLPS-Orc-3087 | Oryctolagus cuniculus | 30.08 | 7e-15 | 84.7 |
| LLPS-Rhb-1013 | Rhinopithecus bieti | 30.08 | 6e-14 | 81.3 |
| LLPS-Caf-0062 | Canis familiaris | 30.08 | 2e-14 | 82.8 |
| LLPS-Poa-3896 | Pongo abelii | 30.08 | 2e-14 | 82.8 |
| LLPS-Eqc-0723 | Equus caballus | 30.08 | 6e-14 | 81.3 |
| LLPS-Cap-3652 | Cavia porcellus | 30.08 | 2e-14 | 82.8 |
| LLPS-Mam-3503 | Macaca mulatta | 30.08 | 2e-14 | 82.8 |
| LLPS-Cas-2455 | Carlito syrichta | 30.08 | 2e-14 | 83.2 |
| LLPS-Ict-3820 | Ictidomys tridecemlineatus | 30.08 | 2e-14 | 82.8 |
| LLPS-Nol-2951 | Nomascus leucogenys | 30.08 | 2e-14 | 82.8 |
| LLPS-Maf-0321 | Macaca fascicularis | 30.08 | 2e-14 | 82.8 |
| LLPS-Chs-1071 | Chlorocebus sabaeus | 30.08 | 2e-14 | 82.8 |
| LLPS-Aon-3556 | Aotus nancymaae | 30.08 | 2e-14 | 82.8 |
| LLPS-Gog-1878 | Gorilla gorilla | 30.08 | 2e-14 | 82.8 |
| LLPS-Caj-3277 | Callithrix jacchus | 30.08 | 2e-14 | 82.8 |
| LLPS-Mal-0473 | Mandrillus leucophaeus | 30.08 | 2e-14 | 82.8 |
| LLPS-Paa-1074 | Papio anubis | 30.08 | 2e-14 | 82.8 |
| LLPS-Myl-1173 | Myotis lucifugus | 30.08 | 3e-14 | 82.4 |
| LLPS-Aim-1821 | Ailuropoda melanoleuca | 30.08 | 2e-14 | 83.2 |
| LLPS-Mup-0802 | Mustela putorius furo | 30.08 | 2e-14 | 83.2 |
| LLPS-Leo-1355 | Lepisosteus oculatus | 29.88 | 6e-15 | 84.7 |
| LLPS-Lac-1025 | Latimeria chalumnae | 29.71 | 6e-14 | 81.3 |
| LLPS-Cea-1717 | Cercocebus atys | 29.66 | 2e-14 | 82.8 |
| LLPS-Bot-0030 | Bos taurus | 29.66 | 9e-14 | 80.9 |
| LLPS-Ova-2520 | Ovis aries | 29.66 | 9e-14 | 80.9 |