LLPS-Brr-2270
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Chlorophyll a-b binding protein, chloroplastic |
| Ensembl Gene: | Bra003198 |
| Ensembl Protein: | Bra003198.1-P |
| Organism: | Brassica rapa |
| Taxa ID: | 51351 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ FUNCTION
| The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated. |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | Bra003198.1 | Bra003198.1-P |
| UniProt | M4CG65, M4CG65_BRARP |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MASNSLMSCG IAAVYPSLLS SSKSKFVSAG VPLPNAGNVG RVRMAAHWMP GEPRPAYLDG 60 61 SAPGDFGFDP LGLGEVPENL ERYKESELIH CRWAMLAVPG ILVPEALGYG NWVKAQEWAA 120 121 VPGGQATYLG NPVPWGTLPT ILAIEFLAIA FVEHQRSMEK DPEKKKYPGG AFDPLGYSKD 180 181 PKKFEELKVK EIKNGRLALL AFVGFCVQQS AYPGTGPLEN LATHLADPWH KNIGDIVIPL 240 241 N 241 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGCGTCGA ACTCGCTCAT GAGCTGCGGC ATCGCCGCCG TCTACCCTTC TCTTCTTTCT 60 61 TCTTCAAAGT CTAAGTTCGT CTCCGCCGGA GTTCCTCTCC CCAACGCCGG GAACGTTGGC 120 121 CGTGTCAGAA TGGCTGCTCA CTGGATGCCC GGCGAGCCAA GACCAGCTTA CCTCGACGGT 180 181 TCTGCTCCTG GGGACTTTGG GTTTGACCCA CTTGGACTTG GAGAGGTTCC AGAGAACCTT 240 241 GAGAGGTACA AAGAATCAGA GCTCATCCAC TGTAGATGGG CTATGCTCGC TGTTCCAGGG 300 301 ATTTTGGTAC CAGAGGCTTT GGGATATGGG AACTGGGTTA AGGCTCAGGA ATGGGCAGCA 360 361 GTACCTGGAG GACAAGCCAC TTACTTGGGG AACCCAGTCC CTTGGGGTAC TTTGCCCACA 420 421 ATCTTGGCTA TAGAGTTCTT AGCTATTGCC TTTGTTGAGC ACCAAAGGAG TATGGAGAAG 480 481 GACCCTGAGA AAAAAAAGTA CCCGGGAGGT GCATTTGACC CTCTCGGATA CTCCAAAGAC 540 541 CCAAAGAAGT TCGAGGAGTT GAAAGTTAAA GAGATCAAGA ACGGGCGGCT TGCACTGTTG 600 601 GCGTTTGTAG GCTTCTGTGT GCAACAATCG GCCTACCCAG GCACAGGACC ATTGGAGAAC 660 661 TTGGCTACTC ACTTGGCCGA TCCATGGCAC AAAAACATTG GCGATATTGT TATCCCTTTG 720 721 AACTGA 726 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Chloroplast thylakoid membrane | |
Cellular Component | Integral component of membrane | |
Cellular Component | Photosystem I | |
Cellular Component | Photosystem II | |
Molecular Function | Chlorophyll binding | |
Biological Process | Photosynthesis, light harvesting | |
Biological Process | Protein-chromophore linkage |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Bro-2801 | Brassica oleracea | 99.17 | 1e-166 | 468 |
| LLPS-Brn-0863 | Brassica napus | 99.17 | 1e-166 | 468 |
| LLPS-Arl-1889 | Arabidopsis lyrata | 98.34 | 3e-165 | 464 |
| LLPS-Art-1504 | Arabidopsis thaliana | 97.51 | 6e-164 | 461 |
| LLPS-Amt-0381 | Amborella trichopoda | 89.95 | 1e-131 | 378 |
| LLPS-Gor-0662 | Gossypium raimondii | 89.58 | 4e-147 | 418 |
| LLPS-Coc-0792 | Corchorus capsularis | 88.8 | 8e-147 | 421 |
| LLPS-Nia-2350 | Nicotiana attenuata | 87.55 | 7e-146 | 415 |
| LLPS-Sei-2452 | Setaria italica | 86.83 | 4e-132 | 382 |
| LLPS-Sob-1822 | Sorghum bicolor | 86.34 | 8e-132 | 379 |
| LLPS-Thc-1305 | Theobroma cacao | 86.31 | 1e-142 | 407 |
| LLPS-Orbr-0780 | Oryza brachyantha | 86.22 | 6e-126 | 362 |
| LLPS-Mae-2028 | Manihot esculenta | 86.19 | 2e-142 | 406 |
| LLPS-Prp-0296 | Prunus persica | 85.95 | 1e-143 | 409 |
| LLPS-Zem-1647 | Zea mays | 85.85 | 6e-131 | 377 |
| LLPS-Viv-1385 | Vitis vinifera | 85.83 | 2e-140 | 401 |
| LLPS-Sol-2358 | Solanum lycopersicum | 85.83 | 2e-143 | 409 |
| LLPS-Sot-1516 | Solanum tuberosum | 85.6 | 7e-142 | 405 |
| LLPS-Cus-1855 | Cucumis sativus | 85.54 | 4e-141 | 402 |
| LLPS-Hea-1028 | Helianthus annuus | 85.42 | 2e-144 | 411 |
| LLPS-Pot-0714 | Populus trichocarpa | 85.29 | 1e-141 | 404 |
| LLPS-Tra-2292 | Triticum aestivum | 84.95 | 6e-129 | 372 |
| LLPS-Mua-0760 | Musa acuminata | 84.94 | 3e-138 | 395 |
| LLPS-Ors-0664 | Oryza sativa | 84.31 | 2e-128 | 370 |
| LLPS-Orni-1721 | Oryza nivara | 84.31 | 8e-127 | 370 |
| LLPS-Orb-1214 | Oryza barthii | 84.31 | 2e-128 | 370 |
| LLPS-Via-1020 | Vigna angularis | 84.23 | 4e-138 | 395 |
| LLPS-Vir-2109 | Vigna radiata | 84.02 | 1e-134 | 388 |
| LLPS-Glm-2092 | Glycine max | 83.95 | 1e-138 | 396 |
| LLPS-Phv-0516 | Phaseolus vulgaris | 83.82 | 3e-135 | 387 |
| LLPS-Ori-1006 | Oryza indica | 83.82 | 8e-128 | 369 |
| LLPS-Dac-2072 | Daucus carota | 83.47 | 5e-141 | 402 |
| LLPS-Brd-0220 | Brachypodium distachyon | 82.52 | 9e-126 | 364 |
| LLPS-Tru-1402 | Triticum urartu | 81.92 | 9e-99 | 293 |
| LLPS-Met-2430 | Medicago truncatula | 80.99 | 5e-132 | 379 |
| LLPS-Php-1745 | Physcomitrella patens | 76.89 | 1e-113 | 333 |
| LLPS-Lep-1811 | Leersia perrieri | 76.03 | 3e-129 | 372 |
| LLPS-Orr-1578 | Oryza rufipogon | 74.46 | 3e-122 | 355 |
| LLPS-Orgl-1917 | Oryza glumaepatula | 74.46 | 8e-122 | 357 |
| LLPS-Sem-1432 | Selaginella moellendorffii | 72.61 | 1e-122 | 356 |
| LLPS-Orp-1820 | Oryza punctata | 65.7 | 4e-104 | 308 |
| LLPS-Chr-1714 | Chlamydomonas reinhardtii | 53.81 | 1e-58 | 192 |
| LLPS-Org-0764 | Oryza glaberrima | 45.73 | 2e-38 | 140 |
| LLPS-Orm-1024 | Oryza meridionalis | 45.73 | 2e-38 | 140 |
| LLPS-Hov-1185 | Hordeum vulgare | 45.73 | 1e-38 | 142 |