LLPS-Brr-0352
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Uncharacterized protein |
| Ensembl Gene: | Bra002879 |
| Ensembl Protein: | Bra002879.1-P |
| Organism: | Brassica rapa |
| Taxa ID: | 51351 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | Bra002879.1 | Bra002879.1-P |
| UniProt | M4CF97, M4CF97_BRARP |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MDEGDGRDQF HRNEAISAVA DEGFMAEEDD DYDDLYNDVN VGDGFLQSAR KTDEEKEKVK 60 61 TEGEEPVLGT PEAEISTPGL VGESVAVKEE AGEGGGGGGS VTDVVVASSG YGAQERKVGD 120 121 VSQQIPGGGL RVELGQAPTR ANDAEAPKGN NFSQGVLPPP PSLGNNGNLM RPVLGNANGP 180 181 GGNMVGNGAI IHMPGVGNGG GGGVTTLFIG DLHWWTTDAE LEAELCKYGT VKEVRFFDEK 240 241 ANGKSRGYCQ AEFYDPMAAA ACKEGMDGYE FNGRPCVVEI APPYMVKRLG EAQVNRSQQA 300 301 QAALAQAKRG GPADPPSKPV IATTNNNNNN NGGNFQGGEN RGFGRGNNNN NGGNFQGGEN 360 361 RGFGRGNWGR GNAQGMGGRG PGGQMRNRPG MGGRGLMGNG GGGGFGQGMG SGPPMNMMHP 420 421 MMGQGFEQGF GGPMGRMGTY GGFPGAPGPP FPGLLPSFPP VGLPGVAPHV NPAFFGRGMP 480 481 MNGMGMMPNA GADMGMWDPN SGGWGGGGGE DLSAARAAES SYGEEAASDH QYGEVTHDRG 540 541 ARPNHVKDKE RASEREWSGS SDRRNREDKY AGYERDIPRE KDVGHGYDLP ERRHRDDRDT 600 601 GREREREHHH KERERSRDRD REMDREKVRH REERERYGGD HRNRHRDEPE HDDEWNRGRS 660 661 SRGHSKSRLS REDNHRSRSR DADYGKRRRL TVE 693 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGACGAGG GAGATGGGAG AGATCAGTTC CATCGCAACG AGGCGATCTC TGCCGTCGCT 60 61 GACGAGGGTT TTATGGCGGA GGAAGACGAC GATTACGATG ATCTTTATAA CGACGTTAAT 120 121 GTCGGAGATG GGTTTCTTCA GTCTGCGAGG AAGACCGACG AGGAGAAGGA GAAGGTCAAA 180 181 ACGGAGGGTG AAGAACCAGT TTTAGGTACA CCAGAAGCTG AGATTTCGAC ACCTGGTTTG 240 241 GTTGGTGAGA GCGTTGCTGT CAAAGAAGAA GCAGGAGAAG GAGGAGGAGG AGGAGGAAGT 300 301 GTTACAGATG TGGTAGTCGC TTCTAGTGGA TATGGAGCTC AAGAGCGTAA GGTAGGCGAT 360 361 GTTAGCCAGC AGATACCTGG AGGCGGGCTT AGAGTTGAGC TAGGGCAAGC TCCTACCAGG 420 421 GCTAATGATG CGGAGGCTCC TAAAGGAAAT AACTTTTCTC AGGGTGTATT GCCACCCCCG 480 481 CCTAGCTTGG GAAATAACGG GAATTTGATG AGACCTGTGT TGGGTAATGC TAATGGACCT 540 541 GGTGGTAACA TGGTCGGGAA CGGAGCTATT ATCCATATGC CTGGTGTGGG GAACGGTGGT 600 601 GGTGGTGGCG TAACTACTCT TTTCATTGGT GATTTGCATT GGTGGACAAC TGATGCTGAA 660 661 CTTGAGGCAG AGCTTTGCAA GTATGGTACA GTGAAGGAGG TTAGGTTCTT CGATGAGAAA 720 721 GCTAATGGGA AGTCGAGAGG GTATTGTCAA GCGGAGTTCT ATGATCCTAT GGCAGCTGCC 780 781 GCTTGCAAAG AGGGGATGGA TGGTTATGAG TTCAATGGGA GGCCTTGTGT TGTTGAGATT 840 841 GCCCCTCCGT ATATGGTTAA GAGACTGGGG GAGGCACAGG TGAACAGAAG CCAACAGGCG 900 901 CAAGCTGCAC TTGCACAAGC TAAGAGAGGA GGGCCTGCTG ATCCTCCGAG TAAACCAGTC 960 961 ATTGCCACCA CCAACAACAA CAACAACAAC AACGGCGGGA ATTTCCAAGG GGGGGAAAAT 1020 1021 AGAGGATTCG GTAGAGGGAA CAACAACAAC AACGGCGGGA ATTTCCAAGG TGGGGAAAAT 1080 1081 AGAGGATTCG GTAGAGGTAA CTGGGGTAGA GGCAATGCTC AAGGAATGGG TGGTAGGGGA 1140 1141 CCAGGTGGTC AAATGAGGAA TAGGCCTGGG ATGGGTGGAA GAGGTTTGAT GGGTAATGGT 1200 1201 GGAGGTGGTG GGTTTGGTCA GGGAATGGGC TCAGGGCCTC CTATGAATAT GATGCATCCA 1260 1261 ATGATGGGGC AAGGGTTTGA ACAGGGTTTT GGTGGACCCA TGGGGAGAAT GGGAACGTAT 1320 1321 GGAGGATTCC CTGGGGCTCC AGGTCCACCG TTTCCTGGGC TTTTGCCCTC GTTCCCTCCT 1380 1381 GTTGGATTAC CTGGAGTGGC ACCTCACGTG AATCCAGCGT TTTTCGGTAG AGGGATGCCG 1440 1441 ATGAATGGAA TGGGAATGAT GCCTAATGCT GGTGCTGATA TGGGAATGTG GGATCCTAAT 1500 1501 AGTGGAGGAT GGGGTGGTGG TGGTGGTGAA GATTTGAGTG CTGCCAGAGC TGCGGAATCG 1560 1561 AGTTACGGGG AGGAAGCTGC ATCGGATCAT CAGTATGGAG AGGTTACTCA CGATAGAGGG 1620 1621 GCTCGTCCGA ATCATGTAAA GGATAAAGAG AGGGCTTCAG AAAGGGAATG GTCTGGTTCA 1680 1681 TCTGATAGAA GGAATCGTGA GGATAAATAT GCTGGTTATG AGAGGGACAT ACCGAGGGAG 1740 1741 AAAGATGTTG GTCATGGTTA TGATTTGCCA GAGAGAAGGC ATCGTGATGA TAGAGACACC 1800 1801 GGTCGTGAGC GTGAGAGGGA ACATCATCAT AAGGAGCGTG AACGTTCCAG GGATCGTGAC 1860 1861 AGAGAAATGG ACAGGGAGAA GGTTCGTCAT AGAGAAGAAC GAGAAAGATA TGGTGGTGAT 1920 1921 CATCGAAATA GACACAGGGA CGAACCGGAG CATGATGATG AGTGGAACAG AGGTCGATCA 1980 1981 TCCAGAGGGC ACAGTAAGTC ACGGTTGTCT CGGGAGGATA ACCATCGCTC AAGATCAAGG 2040 2041 GATGCTGATT ATGGGAAAAG AAGACGGCTT ACAGTTGAAT AG 2082 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Bro-2904 | Brassica oleracea | 97.81 | 1e-57 | 213 |
| LLPS-Brn-1666 | Brassica napus | 89.73 | 4e-123 | 389 |
| LLPS-Prp-0205 | Prunus persica | 86.0 | 2e-06 | 55.5 |
| LLPS-Arl-0039 | Arabidopsis lyrata | 82.91 | 5e-50 | 190 |
| LLPS-Art-0014 | Arabidopsis thaliana | 81.2 | 5e-49 | 187 |
| LLPS-Sob-1285 | Sorghum bicolor | 78.89 | 3e-40 | 160 |
| LLPS-Nia-1849 | Nicotiana attenuata | 77.01 | 4e-37 | 152 |
| LLPS-Tru-1780 | Triticum urartu | 75.82 | 1e-39 | 155 |
| LLPS-Mae-2645 | Manihot esculenta | 75.47 | 6e-06 | 53.9 |
| LLPS-Thc-0021 | Theobroma cacao | 75.27 | 9e-42 | 165 |
| LLPS-Orp-0454 | Oryza punctata | 74.44 | 1e-37 | 152 |
| LLPS-Cus-2110 | Cucumis sativus | 73.12 | 1e-39 | 159 |
| LLPS-Hov-1717 | Hordeum vulgare | 72.22 | 2e-39 | 150 |
| LLPS-Mua-1071 | Musa acuminata | 71.43 | 1e-38 | 155 |
| LLPS-Brd-2517 | Brachypodium distachyon | 70.0 | 5e-36 | 147 |
| LLPS-Viv-1972 | Vitis vinifera | 70.0 | 2e-14 | 80.9 |
| LLPS-Gor-2083 | Gossypium raimondii | 68.1 | 3e-44 | 172 |
| LLPS-Zem-2326 | Zea mays | 68.1 | 3e-40 | 160 |
| LLPS-Glm-0003 | Glycine max | 66.96 | 3e-43 | 169 |
| LLPS-Sol-2145 | Solanum lycopersicum | 66.96 | 2e-39 | 158 |
| LLPS-Via-1608 | Vigna angularis | 66.67 | 2e-14 | 81.3 |
| LLPS-Orbr-2078 | Oryza brachyantha | 66.67 | 5e-38 | 153 |
| LLPS-Ori-0530 | Oryza indica | 66.12 | 2e-38 | 154 |
| LLPS-Orb-2130 | Oryza barthii | 66.12 | 2e-38 | 154 |
| LLPS-Orni-0807 | Oryza nivara | 66.12 | 2e-38 | 154 |
| LLPS-Orgl-2150 | Oryza glumaepatula | 66.12 | 2e-38 | 154 |
| LLPS-Ors-1864 | Oryza sativa | 66.12 | 2e-38 | 154 |
| LLPS-Orr-1587 | Oryza rufipogon | 66.12 | 2e-38 | 154 |
| LLPS-Org-1207 | Oryza glaberrima | 66.12 | 2e-38 | 154 |
| LLPS-Sot-2018 | Solanum tuberosum | 66.09 | 2e-39 | 158 |
| LLPS-Coc-2204 | Corchorus capsularis | 66.02 | 2e-34 | 140 |
| LLPS-Met-1839 | Medicago truncatula | 65.6 | 7e-39 | 157 |
| LLPS-Orm-0514 | Oryza meridionalis | 65.29 | 6e-38 | 153 |
| LLPS-Phv-0327 | Phaseolus vulgaris | 65.22 | 6e-41 | 163 |
| LLPS-Lep-1211 | Leersia perrieri | 64.46 | 4e-37 | 150 |
| LLPS-Php-0698 | Physcomitrella patens | 60.44 | 4e-30 | 130 |
| LLPS-Amt-1736 | Amborella trichopoda | 60.22 | 5e-31 | 133 |
| LLPS-Hea-0532 | Helianthus annuus | 55.15 | 3e-45 | 175 |
| LLPS-Chr-1398 | Chlamydomonas reinhardtii | 46.75 | 3e-07 | 57.0 |
| LLPS-Kop-1408 | Komagataella pastoris | 38.96 | 4e-07 | 57.0 |
| LLPS-Tra-0046 | Triticum aestivum | 37.66 | 6e-08 | 58.2 |
| LLPS-Sem-0286 | Selaginella moellendorffii | 37.18 | 3e-08 | 57.8 |
| LLPS-Dac-2005 | Daucus carota | 36.84 | 4e-07 | 54.3 |
| LLPS-Sei-2336 | Setaria italica | 33.77 | 1e-06 | 53.5 |