LLPS-Bro-3012
106298839
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Uncharacterized protein |
| Gene Name: | 106298839 |
| Ensembl Gene: | Bo6g079920 |
| Ensembl Protein: | Bo6g079920.1 |
| Organism: | Brassica oleracea |
| Taxa ID: | 109376 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | Bo6g079920.1 | Bo6g079920.1 |
| UniProt | A0A0D3CVH6, A0A0D3CVH6_BRAOL | |
| RefSeq | XM_013734976.1 | XP_013590430.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MDYNPNLPLG GGGGSMRRSI SRSVSRASRN LEDIFSSGSR RTQSVNDDEE ALKWAAIEKL 60 61 PTYSRLRTTL MTSVIEDDVY GNQLLSKEVD VTKLDGEDRQ KFIDMVFKVA EQDNERILTK 120 121 LRNRIDRVGI KLPTVEVRYE HLTIKADCYT GNRSLPTLLN VVRNMAESAL GLIGIQFAKK 180 181 AQLTILKDIS GSVKPGRMTL LLGPPSSGKT TLLLALAGKL DKALEVTGDI TYNGYRLDEF 240 241 VPRKTSAYIS QNDLHVGIMT VKETLDFSAR CQGVGTRYDL LNELARREKD AGIFPEADVD 300 301 LFMKASAAQG VKSSLVTDYT LKILGLDICK DTIVGDDMMR GISGGQKKRV TTGEMIVGPT 360 361 KTLFMDEIST GLDSSTTFQI VKCLQQIVHL TDATVLMSLL QPAPETFDLF DDIILLSEGQ 420 421 IVYQGPRDHI LEFFESFGFK CPERKGTADF LQEVTSKKDQ EQYWVDRNRP YRYIPVSEFA 480 481 SRFKSFHVGQ KLSNELSVPF DKSRGHKAAL VFDKYSVSKM ELLKSCWDKE WLLMQRNAFF 540 541 YVFKTVQIII IAAITSTLFL RTEMHTNNES DANLYVGALL FGMIINMFNG FAEMAMMVSR 600 601 LPVFYKQRDL LFYPSWTFTL PTFLLGIPTS IFESTAWMVV TYYSIGFAPD AGRFFKQFLL 660 661 VFLIQQMAAA LFRLIASVCR TMMIANTGGA LTLLLVFLLG GFLLPRSEIP DWWRWAYWIS 720 721 PLTYAFNGLT VNEMFAPRWM NKLAFDNRTR LGTMVLRNWD VYHNRNWYWI GVGALLGFTV 780 781 LFNLLFTFAL TYLNPLGKKS GLLPEEENED SDHRGGEVAM GRMGRNADSA GEASSGGAAK 840 841 RGMVLPFSPL AMSFDDVRYF VDMPAEMREQ GVTENRLQLL KGVTGAFRPG VLTALMGVSG 900 901 AGKTTLMDVL AGRKTGGYIE GDVRISGFPK VQETFARISG YCEQTDIHSP QVTVRESLIF 960 961 SAFLRLPKEV GKEEKMMFVD QVMELVELDS LKDSIVGLPG VTGLSTEQRK RLTIAVELVA 1020 1021 NPSIIFMDEP TSGLDARAAA IVMRAVRNTV DTGRTVVCTI HQPSIDIFEA FDELMLMKRG 1080 1081 GQVIYAGPLG RNSHKVVEYF ESFPGVPKIP EKYNPATWML EASSLAAELK LGVDFAELYK 1140 1141 SSALHQRNKA LVKELSVPPA GASDLYFATQ FSQNTWGQFK SCLWKQWWTY WRSPDYNLVR 1200 1201 FIFTLATSLL IGTIFWQIGG NRSNAADLTM VIGALYAAVI FVGINNCSTV QPMVAVERTV 1260 1261 FYRERAAGMY SAMPYAISQV TCELPYVLIQ TTYYSLIVYA MVGFEWTAAK FFWFLFVSYF 1320 1321 SFLYWTYYGM MTVSLTPNQQ VASIFASAFY GIFNLFSGFF IPRPKIPKWW IWYYWICPVA 1380 1381 WTVYGLIVSQ YGDVETPITV LGGPTGLTVK QYIKDNYGFE SDFMGPVAAV LVAFTVFFAF 1440 1441 IFAFCIRTLN FQTR 1454 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGATTACA ACCCAAACCT TCCGCTAGGC GGAGGAGGTG GGAGTATGCG GCGAAGCATC 60 61 AGCAGAAGCG TAAGCAGAGC CAGCAGAAAC CTCGAAGACA TCTTCTCCTC CGGTTCTAGA 120 121 CGAACACAGT CCGTTAACGA CGACGAAGAG GCTCTCAAAT GGGCCGCCAT CGAGAAACTC 180 181 CCCACCTACA GCCGTCTCCG CACCACTCTC ATGACCTCCG TCATCGAGGA CGACGTCTAC 240 241 GGCAACCAGC TCCTCAGCAA GGAGGTCGAC GTCACGAAGC TCGACGGAGA GGATCGCCAG 300 301 AAGTTCATCG ACATGGTTTT CAAAGTCGCC GAGCAAGACA ACGAGCGGAT CTTGACCAAG 360 361 CTGAGAAACA GGATAGACAG GGTCGGCATC AAGCTACCCA CTGTGGAGGT GAGGTACGAG 420 421 CACCTGACCA TCAAAGCCGA CTGTTACACT GGTAATAGAT CTCTCCCCAC GCTTCTTAAC 480 481 GTGGTGAGGA ACATGGCGGA ATCTGCTCTG GGGTTGATTG GGATTCAGTT TGCCAAGAAA 540 541 GCTCAGCTGA CTATTCTTAA AGATATCTCT GGGAGCGTCA AACCTGGAAG GATGACGCTT 600 601 TTGTTGGGCC CCCCTTCTTC TGGTAAGACC ACGCTTCTAT TGGCTCTCGC TGGAAAGCTC 660 661 GACAAAGCCC TTGAGGTCAC TGGTGATATT ACCTATAATG GTTACCGCCT CGACGAGTTT 720 721 GTTCCGAGGA AAACGTCTGC GTACATCAGC CAGAACGATC TACACGTTGG TATCATGACT 780 781 GTTAAGGAGA CTCTTGATTT CTCCGCTAGG TGCCAAGGTG TTGGTACCCG TTACGATCTG 840 841 TTGAACGAGC TCGCAAGGAG AGAAAAAGAC GCTGGGATCT TCCCTGAAGC CGATGTTGAT 900 901 CTCTTCATGA AAGCCTCGGC TGCTCAAGGT GTTAAGAGCA GTCTCGTCAC TGATTACACT 960 961 CTCAAAATTC TGGGGCTTGA CATTTGCAAA GACACAATAG TTGGAGACGA CATGATGAGA 1020 1021 GGTATCTCCG GAGGTCAGAA GAAACGTGTC ACAACCGGTG AGATGATTGT GGGGCCTACC 1080 1081 AAGACGCTTT TCATGGACGA GATATCCACC GGTCTTGACA GCTCCACCAC ATTCCAAATC 1140 1141 GTCAAGTGCC TTCAGCAGAT CGTTCACCTC ACTGACGCCA CGGTCCTCAT GTCCCTCCTC 1200 1201 CAGCCCGCTC CCGAGACCTT TGACTTATTC GACGATATCA TCTTGTTGTC CGAGGGGCAG 1260 1261 ATCGTGTACC AAGGACCCAG AGACCACATC CTCGAGTTCT TCGAGAGCTT TGGGTTCAAG 1320 1321 TGTCCCGAGA GAAAAGGAAC GGCTGATTTT TTGCAAGAGG TCACCTCCAA GAAAGACCAG 1380 1381 GAGCAATACT GGGTGGACCG GAACAGACCT TATCGGTACA TTCCGGTTTC GGAGTTCGCC 1440 1441 AGCAGGTTCA AGTCCTTCCA CGTTGGACAG AAGCTTTCCA ACGAGCTCTC GGTGCCTTTC 1500 1501 GACAAGTCAC GCGGCCACAA AGCAGCTCTC GTCTTCGACA AGTACTCGGT CTCGAAGATG 1560 1561 GAGCTTCTCA AGAGCTGCTG GGACAAAGAG TGGCTGCTCA TGCAGCGTAA CGCCTTCTTC 1620 1621 TACGTCTTCA AGACGGTGCA GATCATCATC ATCGCCGCGA TCACCTCCAC GCTCTTCCTC 1680 1681 AGAACCGAAA TGCACACGAA TAACGAGTCT GACGCCAACC TCTACGTAGG AGCGTTGCTG 1740 1741 TTCGGAATGA TCATCAACAT GTTTAACGGG TTCGCGGAGA TGGCTATGAT GGTCTCGAGG 1800 1801 CTCCCTGTGT TTTACAAACA GAGGGATCTC CTGTTTTATC CGTCATGGAC ATTCACGCTT 1860 1861 CCAACATTCT TGCTCGGGAT TCCGACCTCG ATCTTCGAAT CAACTGCGTG GATGGTTGTA 1920 1921 ACTTATTACT CTATAGGATT TGCACCGGAC GCGGGGAGAT TCTTCAAGCA GTTTCTATTG 1980 1981 GTGTTTCTGA TTCAGCAAAT GGCTGCCGCG CTCTTTAGGT TGATCGCTTC TGTGTGCAGA 2040 2041 ACCATGATGA TTGCTAATAC TGGTGGTGCT CTCACTCTGC TTCTCGTCTT CTTGCTCGGT 2100 2101 GGCTTCCTTC TTCCGCGAAG TGAGATTCCT GACTGGTGGA GGTGGGCCTA CTGGATTTCT 2160 2161 CCTCTCACCT ATGCGTTCAA TGGTCTGACC GTCAATGAAA TGTTTGCTCC TCGATGGATG 2220 2221 AATAAACTGG CTTTCGACAA CAGGACAAGG CTGGGAACCA TGGTGCTTCG TAATTGGGAT 2280 2281 GTCTACCATA ACAGAAACTG GTACTGGATT GGGGTTGGAG CCTTGCTTGG TTTCACAGTG 2340 2341 CTCTTCAACC TTCTTTTCAC TTTTGCACTT ACCTATCTCA ACCCTCTTGG GAAGAAGTCA 2400 2401 GGTTTACTTC CAGAAGAAGA AAATGAAGAC TCGGATCACA GGGGAGGAGA GGTTGCAATG 2460 2461 GGAAGAATGG GTAGGAATGC AGACTCTGCG GGTGAAGCAT CCAGTGGTGG AGCCGCTAAG 2520 2521 AGAGGAATGG TTCTTCCTTT CAGTCCTTTG GCTATGTCCT TTGACGACGT TAGATACTTT 2580 2581 GTTGACATGC CTGCGGAAAT GAGAGAGCAA GGAGTTACAG AAAACAGACT ACAACTACTC 2640 2641 AAAGGTGTGA CTGGTGCATT TAGACCAGGA GTCTTGACGG CGCTCATGGG GGTGAGTGGT 2700 2701 GCAGGCAAGA CAACACTGAT GGACGTTTTG GCCGGAAGGA AAACAGGAGG ATACATCGAA 2760 2761 GGAGACGTCA GAATCTCAGG ATTCCCAAAG GTTCAAGAGA CGTTTGCTAG AATCTCAGGG 2820 2821 TACTGTGAGC AGACTGATAT TCACTCCCCA CAAGTGACTG TCAGAGAATC TCTGATTTTC 2880 2881 TCCGCTTTCC TCCGTCTTCC CAAAGAAGTC GGCAAAGAAG AGAAAATGAT GTTTGTGGAC 2940 2941 CAAGTGATGG AATTGGTGGA GCTGGACAGT CTGAAGGACT CCATCGTGGG TTTGCCGGGT 3000 3001 GTCACGGGGC TTTCCACGGA GCAGAGGAAG AGATTGACAA TCGCTGTGGA GCTTGTAGCC 3060 3061 AACCCTTCCA TCATCTTCAT GGATGAGCCT ACTTCGGGGC TTGACGCGAG AGCAGCAGCT 3120 3121 ATTGTGATGC GGGCGGTGAG GAACACAGTG GACACGGGAA GAACCGTGGT CTGCACCATC 3180 3181 CACCAGCCCA GCATTGATAT CTTTGAAGCG TTTGATGAGT TGATGCTGAT GAAGAGAGGA 3240 3241 GGACAAGTTA TCTACGCAGG TCCATTGGGT CGAAACTCTC ACAAGGTGGT GGAGTACTTC 3300 3301 GAATCCTTTC CCGGAGTTCC CAAGATTCCA GAAAAGTATA ATCCAGCCAC TTGGATGCTT 3360 3361 GAAGCCAGCT CACTGGCCGC CGAGTTAAAG CTTGGAGTTG ACTTTGCTGA GTTGTACAAG 3420 3421 TCATCCGCCT TACACCAGCG AAACAAAGCA TTGGTGAAAG AACTGAGTGT ACCTCCAGCA 3480 3481 GGGGCCTCTG ATCTCTACTT TGCTACACAA TTCTCGCAGA ACACATGGGG ACAGTTCAAA 3540 3541 TCATGTCTAT GGAAGCAGTG GTGGACTTAT TGGAGATCAC CCGACTACAA CCTTGTCCGC 3600 3601 TTCATCTTCA CACTGGCAAC ATCACTCCTC ATTGGTACCA TCTTCTGGCA AATCGGAGGT 3660 3661 AACAGGTCCA ACGCAGCCGA CCTGACGATG GTTATAGGAG CTTTGTATGC TGCGGTTATC 3720 3721 TTTGTGGGAA TAAACAATTG TTCGACCGTA CAGCCTATGG TGGCAGTGGA GAGGACTGTG 3780 3781 TTCTACAGGG AAAGAGCAGC AGGAATGTAC TCAGCTATGC CATACGCCAT CTCCCAAGTC 3840 3841 ACCTGTGAGC TTCCATATGT TCTTATTCAG ACCACTTACT ACTCCCTCAT CGTCTATGCC 3900 3901 ATGGTTGGGT TCGAGTGGAC AGCTGCCAAG TTCTTCTGGT TCCTTTTTGT AAGCTACTTC 3960 3961 TCCTTCCTTT ACTGGACCTA TTACGGCATG ATGACTGTTT CCCTCACGCC AAACCAGCAA 4020 4021 GTCGCTTCCA TCTTTGCTTC GGCGTTTTAC GGCATTTTCA ACCTCTTCTC TGGCTTCTTC 4080 4081 ATCCCAAGAC CAAAGATCCC CAAGTGGTGG ATATGGTACT ACTGGATCTG CCCTGTCGCA 4140 4141 TGGACCGTCT ATGGATTGAT TGTGTCGCAG TATGGTGACG TGGAGACACC TATCACCGTC 4200 4201 CTCGGAGGCC CTACTGGACT CACCGTTAAG CAATACATTA AGGACAATTA CGGGTTCGAG 4260 4261 TCTGACTTCA TGGGACCAGT TGCTGCCGTC CTTGTCGCAT TCACCGTCTT TTTTGCCTTC 4320 4321 ATCTTTGCCT TCTGCATAAG AACTCTCAAC TTCCAGACCA GATAA 4365 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Brr-2514 | Brassica rapa | 96.52 | 0.0 | 2549 |
| LLPS-Brn-0536 | Brassica napus | 94.53 | 0.0 | 2480 |
| LLPS-Arl-1046 | Arabidopsis lyrata | 92.78 | 0.0 | 2518 |
| LLPS-Art-0234 | Arabidopsis thaliana | 91.77 | 0.0 | 2497 |
| LLPS-Gor-0358 | Gossypium raimondii | 76.03 | 0.0 | 2138 |
| LLPS-Mae-1102 | Manihot esculenta | 74.91 | 0.0 | 2092 |
| LLPS-Glm-2591 | Glycine max | 74.69 | 0.0 | 2071 |
| LLPS-Via-0673 | Vigna angularis | 72.75 | 0.0 | 2026 |
| LLPS-Phv-0407 | Phaseolus vulgaris | 72.62 | 0.0 | 2029 |
| LLPS-Prp-0445 | Prunus persica | 72.21 | 0.0 | 2027 |
| LLPS-Met-2563 | Medicago truncatula | 71.69 | 0.0 | 2018 |
| LLPS-Cus-0008 | Cucumis sativus | 69.89 | 0.0 | 1963 |
| LLPS-Php-0022 | Physcomitrella patens | 67.53 | 0.0 | 772 |
| LLPS-Lep-2218 | Leersia perrieri | 65.16 | 0.0 | 1823 |
| LLPS-Orb-2164 | Oryza barthii | 64.62 | 0.0 | 1808 |
| LLPS-Org-1958 | Oryza glaberrima | 64.53 | 0.0 | 1804 |
| LLPS-Mua-2125 | Musa acuminata | 62.97 | 0.0 | 1674 |
| LLPS-Drm-0959 | Drosophila melanogaster | 25.78 | 2e-12 | 76.6 |