LLPS-Bro-1236
106292581
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Glyceraldehyde-3-phosphate dehydrogenase |
Gene Name: | 106292581 |
Ensembl Gene: | Bo5g021670 |
Ensembl Protein: | Bo5g021670.1 |
Organism: | Brassica oleracea |
Taxa ID: | 109376 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | Bo5g021670.1 | Bo5g021670.1 |
UniProt | A0A0D3CAQ3, A0A0D3CAQ3_BRAOL | |
RefSeq | XM_013728196.1 | XP_013583650.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MAFSSLLRSA ATSAAAPRVE LYTSPSYDHF QVTSSLGFSH NLTSSRFSGA AVSTDSSSSL 60 61 QICNARSVQP IKATATEAPP AVYRPRSSGK TKVGINGFGR IGRLVLRIAT FRDDIEVVAV 120 121 NDPFIDAKYM AYMFKYDSTH GNYKGTINVL DDSTLEINGK EVKVVSKRDP AEIPWADLGA 180 181 DYVVESSGVF TTLAKASSHL KGGAKKVIIS APSADAPMFV VGVNERTYRP NMDIVSNASC 240 241 TTNCLAPLAK VVHEEFGILE GLMTTVHATT ATQKTVDGPS MKDWRGGRGA SQNIIPSSTG 300 301 AAKAVGKVLP ELNGKLTGMA FRVPTPNVSV VDLTCRLEKD ASYEDVKAAI KFASEGPLRG 360 361 IMGYTEEDVV SSDFVGDSRS SIFDANAGIG LSKSFMKLVS WYDNEWGYSN RVLDLIEHMA 420 421 LVSAIR 426 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGCCTTCT CTTCACTTCT CAGATCTGCC GCCACTTCCG CCGCCGCGCC TCGTGTCGAG 60 61 CTTTATACAT CTCCATCGTA CGATCATTTT CAGGTCACGT CAAGTCTTGG ATTTAGTCAC 120 121 AACCTGACCT CGTCCAGATT CTCCGGTGCT GCGGTTTCAA CTGACTCATC TTCATCTTTA 180 181 CAAATATGCA ATGCGAGAAG TGTGCAACCT ATCAAGGCGA CAGCTACAGA AGCACCTCCT 240 241 GCTGTCTACA GGCCAAGGAG CAGTGGAAAG ACTAAGGTCG GGATCAATGG TTTTGGTCGG 300 301 ATTGGAAGGT TGGTCCTTCG TATCGCAACT TTCAGAGATG ATATTGAGGT TGTAGCAGTC 360 361 AACGACCCAT TCATAGACGC CAAGTACATG GCTTACATGT TCAAGTATGA TTCTACTCAT 420 421 GGAAATTACA AAGGAACCAT CAATGTACTT GACGATTCTA CTTTGGAGAT CAATGGAAAA 480 481 GAGGTCAAAG TTGTCAGCAA GAGAGACCCA GCTGAGATCC CTTGGGCTGA TCTTGGAGCT 540 541 GATTATGTTG TTGAATCTTC CGGAGTATTC ACCACCCTTG CAAAAGCTTC GTCACATTTG 600 601 AAGGGTGGCG CCAAGAAAGT CATCATCTCT GCCCCTTCAG CGGACGCACC AATGTTTGTT 660 661 GTTGGAGTAA ATGAGAGGAC ATACAGACCT AACATGGATA TTGTCTCTAA TGCCAGCTGT 720 721 ACCACCAATT GTCTTGCACC TCTTGCTAAG GTGGTGCATG AGGAATTTGG AATTCTTGAA 780 781 GGCTTGATGA CAACAGTTCA TGCGACCACA GCAACTCAGA AAACTGTGGA CGGCCCATCA 840 841 ATGAAGGACT GGAGAGGAGG CCGAGGTGCC AGTCAAAACA TCATTCCTAG CTCAACCGGC 900 901 GCTGCAAAGG CTGTTGGTAA GGTTCTTCCA GAACTCAATG GAAAACTAAC GGGAATGGCT 960 961 TTCCGTGTTC CAACACCAAA TGTTTCTGTT GTGGATTTAA CTTGTCGGCT TGAGAAGGAT 1020 1021 GCATCGTACG AAGATGTTAA GGCAGCCATC AAGTTTGCTT CAGAAGGACC ACTTAGGGGA 1080 1081 ATTATGGGGT ACACAGAAGA AGATGTCGTC TCCAGCGATT TTGTCGGAGA TTCAAGGTCA 1140 1141 AGTATCTTCG ATGCTAATGC TGGGATTGGA TTAAGCAAGT CCTTCATGAA ACTTGTATCC 1200 1201 TGGTATGACA ACGAATGGGG TTACAGCAAC CGAGTCCTTG ACCTGATAGA GCATATGGCG 1260 1261 TTAGTTTCAG CCATCCGCTA A 1281 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Brn-1663 | Brassica napus | 98.05 | 0.0 | 776 |
LLPS-Brr-1437 | Brassica rapa | 94.63 | 0.0 | 756 |
LLPS-Art-0855 | Arabidopsis thaliana | 92.44 | 0.0 | 735 |
LLPS-Arl-0921 | Arabidopsis lyrata | 92.16 | 0.0 | 734 |
LLPS-Glm-1847 | Glycine max | 87.12 | 0.0 | 644 |
LLPS-Nia-1305 | Nicotiana attenuata | 86.85 | 0.0 | 639 |
LLPS-Phv-0858 | Phaseolus vulgaris | 86.58 | 0.0 | 635 |
LLPS-Brd-0056 | Brachypodium distachyon | 86.39 | 0.0 | 623 |
LLPS-Via-0150 | Vigna angularis | 86.3 | 0.0 | 631 |
LLPS-Sot-1453 | Solanum tuberosum | 86.3 | 0.0 | 635 |
LLPS-Cus-2182 | Cucumis sativus | 86.3 | 0.0 | 636 |
LLPS-Viv-1572 | Vitis vinifera | 86.3 | 0.0 | 639 |
LLPS-Mua-0724 | Musa acuminata | 86.26 | 0.0 | 631 |
LLPS-Tra-3106 | Triticum aestivum | 86.07 | 0.0 | 618 |
LLPS-Hea-0000 | Helianthus annuus | 85.75 | 0.0 | 623 |
LLPS-Orb-1694 | Oryza barthii | 85.63 | 0.0 | 605 |
LLPS-Hov-1790 | Hordeum vulgare | 85.52 | 0.0 | 613 |
LLPS-Orp-1084 | Oryza punctata | 85.07 | 0.0 | 603 |
LLPS-Orgl-0899 | Oryza glumaepatula | 85.0 | 0.0 | 613 |
LLPS-Ori-0150 | Oryza indica | 85.0 | 0.0 | 613 |
LLPS-Orr-0639 | Oryza rufipogon | 85.0 | 0.0 | 613 |
LLPS-Org-1843 | Oryza glaberrima | 85.0 | 0.0 | 613 |
LLPS-Ors-0793 | Oryza sativa | 85.0 | 0.0 | 613 |
LLPS-Sob-1725 | Sorghum bicolor | 85.0 | 0.0 | 613 |
LLPS-Sei-0966 | Setaria italica | 84.68 | 0.0 | 605 |
LLPS-Orni-1197 | Oryza nivara | 84.44 | 0.0 | 610 |
LLPS-Orbr-1208 | Oryza brachyantha | 84.44 | 0.0 | 610 |
LLPS-Coc-1376 | Corchorus capsularis | 83.62 | 0.0 | 659 |
LLPS-Amt-0596 | Amborella trichopoda | 83.43 | 0.0 | 588 |
LLPS-Mae-0361 | Manihot esculenta | 83.29 | 0.0 | 659 |
LLPS-Lep-1287 | Leersia perrieri | 83.24 | 0.0 | 600 |
LLPS-Tru-0137 | Triticum urartu | 83.06 | 0.0 | 604 |
LLPS-Prp-1233 | Prunus persica | 82.91 | 0.0 | 642 |
LLPS-Gor-0792 | Gossypium raimondii | 82.89 | 0.0 | 657 |
LLPS-Pot-2532 | Populus trichocarpa | 82.06 | 0.0 | 650 |
LLPS-Thc-0845 | Theobroma cacao | 81.56 | 0.0 | 649 |
LLPS-Met-0044 | Medicago truncatula | 80.73 | 0.0 | 645 |
LLPS-Urm-2012 | Ursus maritimus | 75.98 | 3e-128 | 382 |
LLPS-Sem-2446 | Selaginella moellendorffii | 75.3 | 2e-173 | 496 |
LLPS-Sol-0507 | Solanum lycopersicum | 75.22 | 5e-173 | 495 |
LLPS-Php-2231 | Physcomitrella patens | 73.95 | 1e-165 | 476 |
LLPS-Zem-0092 | Zea mays | 73.8 | 4e-167 | 480 |
LLPS-Put-1347 | Puccinia triticina | 73.56 | 2e-165 | 476 |
LLPS-Pug-1146 | Puccinia graminis | 73.56 | 2e-165 | 476 |
LLPS-Xet-3407 | Xenopus tropicalis | 73.25 | 3e-162 | 468 |
LLPS-Orm-0672 | Oryza meridionalis | 73.11 | 8e-165 | 474 |
LLPS-Asm-2392 | Astyanax mexicanus | 72.64 | 3e-163 | 470 |
LLPS-Nec-1336 | Neurospora crassa | 72.37 | 2e-166 | 478 |
LLPS-Cii-1705 | Ciona intestinalis | 72.34 | 7e-162 | 467 |
LLPS-Fuv-1461 | Fusarium verticillioides | 72.07 | 8e-162 | 467 |
LLPS-Gaa-2779 | Gasterosteus aculeatus | 72.04 | 4e-163 | 471 |
LLPS-Gaga-3779 | Gallus gallus | 72.04 | 2e-165 | 476 |
LLPS-Meg-1741 | Meleagris gallopavo | 72.04 | 2e-165 | 476 |
LLPS-Crn-1483 | Cryptococcus neoformans | 71.86 | 1e-160 | 464 |
LLPS-Dio-1932 | Dipodomys ordii | 71.83 | 9e-162 | 466 |
LLPS-Myl-0109 | Myotis lucifugus | 71.73 | 8e-164 | 471 |
LLPS-Leo-2882 | Lepisosteus oculatus | 71.73 | 2e-160 | 462 |
LLPS-Mao-1585 | Magnaporthe oryzae | 71.6 | 2e-164 | 473 |
LLPS-Yal-1396 | Yarrowia lipolytica | 71.52 | 1e-159 | 461 |
LLPS-Loa-1837 | Loxodonta africana | 71.52 | 6e-160 | 461 |
LLPS-Beb-1177 | Beauveria bassiana | 71.47 | 6e-160 | 462 |
LLPS-Scp-1646 | Schizosaccharomyces pombe | 71.43 | 3e-159 | 460 |
LLPS-Bot-1615 | Bos taurus | 71.43 | 9e-133 | 394 |
LLPS-Ten-1927 | Tetraodon nigroviridis | 71.43 | 3e-161 | 466 |
LLPS-Anc-1983 | Anolis carolinensis | 71.43 | 9e-164 | 471 |
LLPS-Orn-1922 | Oreochromis niloticus | 71.43 | 9e-162 | 466 |
LLPS-Fia-2727 | Ficedula albicollis | 71.43 | 2e-164 | 473 |
LLPS-Orc-1794 | Oryctolagus cuniculus | 71.43 | 2e-163 | 470 |
LLPS-Pyt-1071 | Pyrenophora teres | 71.3 | 3e-165 | 475 |
LLPS-Pytr-1564 | Pyrenophora triticirepentis | 71.3 | 3e-165 | 475 |
LLPS-Tag-1785 | Taeniopygia guttata | 71.21 | 2e-160 | 462 |
LLPS-Ict-1700 | Ictidomys tridecemlineatus | 71.21 | 3e-159 | 460 |
LLPS-Mod-2223 | Monodelphis domestica | 71.21 | 3e-159 | 459 |
LLPS-Anp-0432 | Anas platyrhynchos | 71.21 | 5e-160 | 462 |
LLPS-Map-0771 | Magnaporthe poae | 71.17 | 1e-164 | 474 |
LLPS-Fus-0443 | Fusarium solani | 71.17 | 6e-160 | 462 |
LLPS-Mup-1858 | Mustela putorius furo | 71.12 | 4e-163 | 469 |
LLPS-Aim-1274 | Ailuropoda melanoleuca | 71.12 | 3e-162 | 467 |
LLPS-Orl-0948 | Oryzias latipes | 71.12 | 6e-161 | 464 |
LLPS-Icp-3192 | Ictalurus punctatus | 71.12 | 6e-159 | 459 |
LLPS-Eqc-3077 | Equus caballus | 71.12 | 6e-163 | 469 |
LLPS-Fec-4159 | Felis catus | 71.12 | 8e-163 | 469 |
LLPS-Caf-3704 | Canis familiaris | 71.04 | 1e-162 | 468 |
LLPS-Sus-1177 | Sus scrofa | 70.9 | 3e-157 | 457 |
LLPS-Coo-1419 | Colletotrichum orbiculare | 70.87 | 6e-164 | 472 |
LLPS-Cogr-1394 | Colletotrichum graminicola | 70.87 | 2e-163 | 471 |
LLPS-Cog-1389 | Colletotrichum gloeosporioides | 70.87 | 3e-163 | 470 |
LLPS-Tut-2411 | Tursiops truncatus | 70.82 | 8e-163 | 469 |
LLPS-Ran-4838 | Rattus norvegicus | 70.82 | 3e-162 | 468 |
LLPS-Pof-2551 | Poecilia formosa | 70.82 | 2e-161 | 466 |
LLPS-Asc-0445 | Aspergillus clavatus | 70.69 | 7e-162 | 468 |
LLPS-Ova-2671 | Ovis aries | 70.61 | 7e-161 | 464 |
LLPS-Gag-1608 | Gaeumannomyces graminis | 70.57 | 1e-161 | 466 |
LLPS-Cae-1498 | Caenorhabditis elegans | 70.54 | 5e-155 | 449 |
LLPS-Drm-1965 | Drosophila melanogaster | 70.52 | 2e-157 | 455 |
LLPS-Scj-0838 | Schizosaccharomyces japonicus | 70.52 | 2e-156 | 453 |
LLPS-Scm-1317 | Scophthalmus maximus | 70.52 | 2e-160 | 463 |
LLPS-Dar-4091 | Danio rerio | 70.52 | 2e-159 | 461 |
LLPS-Gas-0489 | Galdieria sulphuraria | 70.48 | 9e-159 | 459 |
LLPS-Caj-1208 | Callithrix jacchus | 70.48 | 2e-162 | 468 |
LLPS-Poa-4090 | Pongo abelii | 70.48 | 2e-162 | 468 |
LLPS-Tar-3839 | Takifugu rubripes | 70.21 | 3e-160 | 462 |
LLPS-Xim-2499 | Xiphophorus maculatus | 70.21 | 2e-160 | 462 |
LLPS-Paa-4581 | Papio anubis | 70.18 | 2e-161 | 466 |
LLPS-Mal-4677 | Mandrillus leucophaeus | 70.18 | 2e-161 | 466 |
LLPS-Chs-0744 | Chlorocebus sabaeus | 70.18 | 2e-161 | 466 |
LLPS-Maf-3914 | Macaca fascicularis | 70.18 | 2e-161 | 466 |
LLPS-Aon-0678 | Aotus nancymaae | 70.18 | 4e-162 | 467 |
LLPS-Nol-4058 | Nomascus leucogenys | 70.18 | 4e-162 | 467 |
LLPS-Man-0771 | Macaca nemestrina | 70.18 | 2e-161 | 466 |
LLPS-Fud-4028 | Fukomys damarensis | 70.13 | 1e-153 | 445 |
LLPS-Zyt-1397 | Zymoseptoria tritici | 70.0 | 2e-161 | 466 |
LLPS-Mam-3311 | Macaca mulatta | 69.97 | 2e-155 | 450 |
LLPS-Cis-1448 | Ciona savignyi | 69.94 | 6e-159 | 459 |
LLPS-Abg-1533 | Absidia glauca | 69.91 | 8e-159 | 459 |
LLPS-Mum-3075 | Mus musculus | 69.91 | 2e-160 | 463 |
LLPS-Cea-4670 | Cercocebus atys | 69.88 | 3e-160 | 462 |
LLPS-Gog-2125 | Gorilla gorilla | 69.88 | 9e-162 | 466 |
LLPS-Pap-4528 | Pan paniscus | 69.88 | 9e-162 | 466 |
LLPS-Pat-4300 | Pan troglodytes | 69.88 | 9e-162 | 466 |
LLPS-Hos-0867 | Homo sapiens | 69.88 | 9e-162 | 466 |
LLPS-Usm-0011 | Ustilago maydis | 69.79 | 5e-159 | 459 |
LLPS-Spr-0384 | Sporisorium reilianum | 69.79 | 8e-159 | 459 |
LLPS-Sah-1492 | Sarcophilus harrisii | 69.6 | 5e-159 | 459 |
LLPS-Chc-0182 | Chondrus crispus | 69.58 | 2e-160 | 463 |
LLPS-Scf-1979 | Scleropages formosus | 69.3 | 3e-157 | 455 |
LLPS-Asfu-0785 | Aspergillus fumigatus | 69.28 | 2e-157 | 456 |
LLPS-Asni-0133 | Aspergillus niger | 69.07 | 5e-161 | 464 |
LLPS-Trv-0345 | Trichoderma virens | 69.07 | 4e-158 | 457 |
LLPS-Asf-0432 | Aspergillus flavus | 68.98 | 3e-160 | 462 |
LLPS-Cap-4073 | Cavia porcellus | 68.88 | 2e-164 | 474 |
LLPS-Aso-1185 | Aspergillus oryzae | 68.67 | 2e-159 | 460 |
LLPS-Dos-0351 | Dothistroma septosporum | 68.56 | 2e-159 | 461 |
LLPS-Nef-1344 | Neosartorya fischeri | 68.56 | 1e-156 | 454 |
LLPS-Asn-1593 | Aspergillus nidulans | 68.47 | 9e-159 | 459 |
LLPS-Trr-0372 | Trichoderma reesei | 68.47 | 1e-157 | 456 |
LLPS-Vir-0676 | Vigna radiata | 68.44 | 3e-161 | 466 |
LLPS-Blg-1123 | Blumeria graminis | 67.78 | 1e-158 | 458 |
LLPS-Scc-0306 | Schizosaccharomyces cryophilus | 67.78 | 1e-154 | 448 |
LLPS-Rhb-1567 | Rhinopithecus bieti | 67.07 | 7e-145 | 426 |
LLPS-Ere-0883 | Erinaceus europaeus | 66.97 | 5e-146 | 426 |
LLPS-Pes-0756 | Pelodiscus sinensis | 65.63 | 2e-155 | 451 |
LLPS-Cas-2932 | Carlito syrichta | 60.84 | 9e-130 | 384 |