LLPS-Bro-1104
106326464
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Uncharacterized protein |
| Gene Name: | 106326464 |
| Ensembl Gene: | Bo1g147230 |
| Ensembl Protein: | Bo1g147230.1 |
| Organism: | Brassica oleracea |
| Taxa ID: | 109376 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | Bo1g147230.1 | Bo1g147230.1 |
| UniProt | A0A0D3AF42, A0A0D3AF42_BRAOL | |
| RefSeq | XM_013764470.1 | XP_013619924.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MVSGGGGGGG ARVSIPAKTR KTIQTIKEIT AGNYSEEEIH AMLLECNMNP DEATDRLSLQ 60 61 DPFLEVKKKR DKRKENISNK DSVEPQWRSG GPGRGGRGGR VNFSSRHSSH DGAGAKNSFR 120 121 KENGPKHITD PSASTSQETI TKDNAVSSHS AVMDKTSDVH HPSNRPARSG KGKATGSSVP 180 181 SNSIDVESSK NRVALSVNEQ KSAGSLPLPR PSSAEVRFTP KSVGEQTAHE QHIGEGKFHN 240 241 RARGVVKTAV NDAHVPRPAS SHSNSTGSRP SSNYSNRSHQ TVAQRGKEWK PKPVNHNTTT 300 301 QGSVASATTE TLVVPTEASE KSVEDVVPSA EGTSRLERQL EDLQIQRQHV IIPNHILVPE 360 361 AERTKFSFGS FDAGFSITSS SVAFPETEKI SVPLSQSSPE VEGSFEEEEL SHPTVISTEK 420 421 DEENNVYSES PSQVPNDMAG EGITAADAAP EYDVSKQENM LESESNQNSF DHSPNNIIGL 480 481 APPAPGSQLP QFENADPQAR DALRIPNFVV QQPFDTASYY AQFYRPGPDS DGRVSPFAAS 540 541 KFNGNVTGLP PHSSQTMQEG GNNVVLSTSS PTPLSTQAAG LMQSSLPVTQ QPVPVFRPPG 600 601 LHMSHYPPNY MPYGHYFSPF YPPLPTMHPF LSNGAFPQQP QASGVYHTPP PLGAAAPGGK 660 661 YTLPHYKPGT NAGNLAHVGM PGGYGPSYGS FPAGYNPTSA ASAGNSNSNE DLSTLQLKEN 720 721 NGYNTTGQQS EALPVWIAGP GRDVPSSFYG LQHHGQHVTY APAQAGHVAF PGMYHPGQAV 780 781 TAPGGVHHPL LQQSQGGVAG AEMGAPGPNV FQQPQQTQMN WPSNY 825 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGTCAGCG GCGGCGGCGG TGGTGGTGGC GCTAGGGTTT CGATTCCGGC GAAGACTCGG 60 61 AAGACGATTC AGACGATCAA GGAGATCACT GCTGGGAACT ACAGTGAGGA GGAGATTCAC 120 121 GCAATGCTCC TCGAATGCAA CATGAATCCC GATGAGGCTA CTGACCGCCT ATCCCTTCAG 180 181 GATCCATTCC TTGAGGTTAA GAAAAAGCGT GATAAGAGAA AAGAGAACAT TAGCAACAAG 240 241 GATTCTGTTG AGCCACAATG GAGATCTGGT GGCCCAGGCC GTGGTGGCAG GGGTGGTCGT 300 301 GTGAACTTCT CTTCTCGTCA TTCATCACAT GATGGTGCTG GTGCAAAGAA TTCTTTCAGA 360 361 AAAGAAAACG GTCCCAAGCA TATCACCGAT CCATCAGCTT CAACCTCCCA AGAAACAATA 420 421 ACTAAAGACA ATGCAGTGTC AAGCCATTCA GCTGTGATGG ATAAAACTTC TGATGTTCAT 480 481 CATCCTTCCA ACCGACCAGC TCGTTCAGGC AAAGGCAAAG CTACTGGATC TTCAGTCCCC 540 541 TCAAACAGCA TTGATGTTGA ATCAAGCAAA AATCGTGTAG CATTGAGCGT TAATGAGCAG 600 601 AAGTCGGCTG GTTCTTTGCC ACTCCCTCGT CCATCCTCCG CTGAGGTTCG ATTCACTCCC 660 661 AAATCTGTGG GCGAGCAAAC AGCGCATGAA CAACACATTG GAGAAGGCAA GTTCCATAAC 720 721 AGAGCTCGTG GGGTTGTGAA GACCGCCGTG AATGACGCTC ATGTTCCGAG GCCTGCCTCA 780 781 TCTCATAGCA ACAGCACGGG TAGCCGGCCT TCTTCTAACT ACAGTAACCG GTCGCATCAG 840 841 ACCGTTGCTC AAAGAGGTAA GGAGTGGAAA CCGAAGCCAG TGAACCATAA CACCACTACT 900 901 CAGGGCTCCG TTGCATCAGC TACAACCGAA ACTCTTGTAG TTCCTACTGA AGCCAGCGAA 960 961 AAATCTGTTG AAGATGTTGT CCCTTCTGCA GAGGGCACAT CTAGATTGGA GAGGCAGCTT 1020 1021 GAAGACTTGC AGATCCAGCG CCAGCATGTT ATTATCCCAA ACCATATCCT TGTTCCAGAG 1080 1081 GCTGAACGAA CCAAGTTTAG CTTTGGGAGC TTCGATGCTG GATTTTCAAT TACATCAAGC 1140 1141 TCGGTAGCTT TTCCAGAGAC TGAGAAAATA TCTGTACCTC TCTCTCAAAG TTCGCCGGAA 1200 1201 GTTGAAGGAA GTTTTGAAGA GGAGGAATTG AGTCACCCAA CCGTCATTTC GACTGAAAAG 1260 1261 GATGAGGAAA ATAATGTTTA CTCAGAGTCG CCTTCACAAG TTCCAAATGA TATGGCTGGT 1320 1321 GAAGGTATTA CCGCAGCAGA TGCAGCGCCG GAGTATGATG TCTCCAAGCA AGAGAATATG 1380 1381 TTGGAGTCCG AAAGCAATCA AAACTCTTTT GACCACTCAC CAAACAATAT TATCGGGCTT 1440 1441 GCTCCTCCAG CTCCTGGGAG CCAGCTTCCA CAATTTGAGA ATGCTGACCC TCAAGCACGT 1500 1501 GATGCCCTTC GTATTCCTAA TTTTGTGGTC CAGCAGCCAT TTGATACAGC GAGTTACTAT 1560 1561 GCTCAGTTCT ACCGCCCAGG CCCTGACAGT GATGGCCGTG TTTCTCCCTT TGCTGCGTCC 1620 1621 AAATTCAATG GGAATGTTAC AGGGTTGCCT CCGCATTCAT CTCAAACCAT GCAAGAGGGT 1680 1681 GGAAATAACG TAGTGCTGTC GACATCTAGT CCAACTCCAC TGTCAACTCA GGCTGCTGGG 1740 1741 CTGATGCAGA GCTCTTTACC TGTCACGCAG CAGCCTGTTC CTGTTTTCCG TCCCCCGGGA 1800 1801 TTACATATGT CGCATTATCC ACCAAACTAC ATGCCATACG GACACTACTT CTCCCCGTTC 1860 1861 TATCCACCTC TCCCGACAAT GCACCCGTTC TTAAGCAACG GTGCATTTCC CCAGCAACCT 1920 1921 CAGGCGAGCG GTGTATATCA TACTCCTCCA CCCCTTGGGG CTGCTGCACC AGGAGGCAAA 1980 1981 TACACACTTC CTCATTACAA GCCCGGGACT AACGCAGGAA ACTTGGCTCA TGTTGGTATG 2040 2041 CCTGGTGGTT ACGGACCATC ATATGGTTCG TTCCCAGCAG GTTATAATCC CACCTCTGCT 2100 2101 GCTTCAGCTG GGAATTCAAA TTCCAATGAA GATCTCAGCA CGTTGCAGCT GAAGGAAAAC 2160 2161 AACGGTTACA ACACAACAGG GCAACAGAGT GAAGCATTGC CTGTGTGGAT TGCTGGACCA 2220 2221 GGAAGAGATG TGCCAAGCTC TTTCTACGGT TTACAGCACC ATGGGCAACA CGTGACTTAC 2280 2281 GCTCCAGCAC AAGCTGGTCA CGTGGCATTC CCGGGGATGT ATCATCCGGG ACAAGCAGTG 2340 2341 ACAGCACCAG GAGGCGTTCA TCATCCGCTC TTACAACAGT CTCAAGGTGG TGTTGCTGGA 2400 2401 GCAGAAATGG GAGCACCTGG TCCTAACGTT TTCCAACAGC CTCAACAGAC GCAGATGAAT 2460 2461 TGGCCAAGTA ATTACTGA 2478 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Brr-0079 | Brassica rapa | 95.03 | 0.0 | 1415 |
| LLPS-Brn-1566 | Brassica napus | 80.39 | 0.0 | 1117 |
| LLPS-Arl-1801 | Arabidopsis lyrata | 80.12 | 0.0 | 1136 |
| LLPS-Art-0908 | Arabidopsis thaliana | 77.75 | 0.0 | 1117 |
| LLPS-Sol-2035 | Solanum lycopersicum | 61.29 | 3e-14 | 81.3 |
| LLPS-Mae-1993 | Manihot esculenta | 59.18 | 6e-09 | 63.9 |
| LLPS-Hea-2136 | Helianthus annuus | 57.38 | 6e-12 | 73.6 |
| LLPS-Pot-2030 | Populus trichocarpa | 57.35 | 1e-14 | 82.8 |
| LLPS-Php-0442 | Physcomitrella patens | 57.14 | 5e-09 | 64.3 |
| LLPS-Gor-0019 | Gossypium raimondii | 57.14 | 4e-14 | 80.5 |
| LLPS-Sob-2025 | Sorghum bicolor | 55.74 | 1e-11 | 72.8 |
| LLPS-Nia-2409 | Nicotiana attenuata | 55.37 | 9e-24 | 111 |
| LLPS-Via-0546 | Vigna angularis | 54.74 | 1e-27 | 124 |
| LLPS-Zem-1956 | Zea mays | 54.55 | 3e-16 | 87.8 |
| LLPS-Amt-2192 | Amborella trichopoda | 54.55 | 1e-12 | 72.0 |
| LLPS-Viv-1343 | Vitis vinifera | 54.17 | 6e-15 | 83.6 |
| LLPS-Tra-1617 | Triticum aestivum | 54.1 | 4e-11 | 71.2 |
| LLPS-Brd-2043 | Brachypodium distachyon | 54.1 | 5e-11 | 70.9 |
| LLPS-Mua-1312 | Musa acuminata | 54.1 | 4e-12 | 74.3 |
| LLPS-Glm-0776 | Glycine max | 52.94 | 2e-12 | 75.1 |
| LLPS-Orp-1635 | Oryza punctata | 52.46 | 3e-11 | 71.6 |
| LLPS-Lep-0493 | Leersia perrieri | 52.24 | 1e-10 | 69.3 |
| LLPS-Thc-2022 | Theobroma cacao | 52.17 | 3e-25 | 116 |
| LLPS-Prp-1892 | Prunus persica | 52.17 | 5e-10 | 67.4 |
| LLPS-Dac-0832 | Daucus carota | 51.47 | 6e-25 | 115 |
| LLPS-Hov-1955 | Hordeum vulgare | 51.39 | 2e-11 | 72.4 |
| LLPS-Met-1681 | Medicago truncatula | 50.63 | 7e-14 | 80.1 |
| LLPS-Orni-2197 | Oryza nivara | 50.0 | 6e-12 | 73.6 |
| LLPS-Coc-1370 | Corchorus capsularis | 50.0 | 2e-11 | 72.8 |
| LLPS-Orr-0410 | Oryza rufipogon | 50.0 | 6e-12 | 73.6 |
| LLPS-Org-0340 | Oryza glaberrima | 50.0 | 1e-11 | 73.2 |
| LLPS-Ors-0963 | Oryza sativa | 50.0 | 6e-12 | 73.6 |
| LLPS-Phv-1258 | Phaseolus vulgaris | 50.0 | 4e-12 | 74.3 |
| LLPS-Vir-1212 | Vigna radiata | 49.92 | 8e-138 | 436 |
| LLPS-Cus-0553 | Cucumis sativus | 42.44 | 3e-150 | 470 |
| LLPS-Ori-1728 | Oryza indica | 39.03 | 3e-67 | 243 |
| LLPS-Orbr-1974 | Oryza brachyantha | 38.74 | 2e-65 | 239 |
| LLPS-Orgl-0760 | Oryza glumaepatula | 38.13 | 5e-66 | 241 |
| LLPS-Orm-1470 | Oryza meridionalis | 36.79 | 8e-89 | 305 |
| LLPS-Tru-0034 | Triticum urartu | 36.13 | 2e-78 | 275 |
| LLPS-Sei-2461 | Setaria italica | 36.11 | 8e-64 | 234 |
| LLPS-Orb-1702 | Oryza barthii | 34.57 | 2e-35 | 148 |