LLPS-Brn-3243
BnaA07g08030D
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | BnaA07g08030D protein |
| Gene Name: | BnaA07g08030D, GSBRNA2T00089823001 |
| Ensembl Gene: | GSBRNA2T00157997001 |
| Ensembl Protein: | CDX94662 |
| Organism: | Brassica napus |
| Taxa ID: | 3708 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | CDX94662 | CDX94662 |
| UniProt | A0A078FS08, A0A078FS08_BRANA | |
| GeneBank | LK032056 | CDY15632.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MSSSSKASLG GGGRKGNNDI PSGCRKIVES LKEIVNSPEA EIYAMLKECN MDPNEAVHRL 60 61 LSQDPFHEVK SKKEKKKESQ TRDIPDSRLR GANNAYNRGG RGASNRYAGR NGSSHFSSTG 120 121 SGNFQGKSTD KKESGTQGYT SSWPSASGVA NHHQTPHSDS VVTENKLPSA PSGDGVSSSQ 180 181 SASGHQTAWF GAPGKMSMAD IVKMGRPQSK TTNSQQNVNM RSEINHEQEV NANHQVPVKD 240 241 EWPSIEKPPA PSTSSVSVAP AESEICSGPA DFQSDQHLSH RLGDIRLAEN GPSENLGGEH 300 301 DSVAGRNVQE DESGVSSEFN GNQYTYQTHS HRVEHHKDED EVSSGSAELQ QLTVDDQEAS 360 361 HEEDRPAVLI PNHLLIHTKE CSQLSFGSFG SMTLSNNAEE TPAVGQQVEH SDARNTEFYG 420 421 DEQLGSRANG NMGHAPAAGS YDDSLESRPE VLKQENSETA QENQYAFAQS EPGYGKQQQL 480 481 NTAYDDASQT NAQNQMQNLA SLSNVMGYPH SVPNNLLAQN ARELDFQYAI AQSMQSRNNN 540 541 NASPLGGQSI PMPEALRGSG VPATQPSQQT LPGGNMATGP ALPPQQLPMH PYSQPTMPLA 600 601 HFANMLGYPL MPQNYPYMPS AFPQTFAGNS LYQQQLAALL PQYKTNLSPS NLPHSATALN 660 661 VGSAGNFPLN QHSTPPGTTM GYEDVLSSQY KESSHLLALQ QQQQQNENSA MWHHGHGSRT 720 721 MSGVPANTYY NLQAQQQLQQ AQQAAGGYRQ AQQQQHYGSQ GYPNYYQSQT EMSVDRQQQN 780 781 PRDGAGAQAG SQPSNQTQQL WQNSY 805 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGAGCAGCA GCAGCAAGGC CAGCCTCGGC GGCGGAGGGA GAAAAGGCAA TAATGATATT 60 61 CCGTCTGGGT GTAGAAAAAT AGTAGAGAGC TTGAAGGAGA TTGTAAACTC CCCTGAGGCT 120 121 GAGATCTACG CTATGCTCAA AGAGTGTAAT ATGGATCCTA ACGAAGCCGT TCATCGCCTC 180 181 CTCTCTCAAG ATCCTTTTCA CGAGGTAAAG AGCAAAAAAG AAAAGAAGAA AGAGAGTCAG 240 241 ACAAGGGATA TACCGGATTC CCGGCTGCGT GGTGCTAATA ACGCATACAA CCGTGGTGGT 300 301 AGAGGTGCTT CTAACCGTTA TGCTGGACGA AATGGATCTA GCCATTTCAG CTCTACTGGT 360 361 TCTGGAAACT TCCAGGGAAA ATCTACAGAC AAGAAAGAGA GTGGAACCCA AGGTTACACA 420 421 AGTTCTTGGC CTTCTGCCTC TGGAGTGGCA AACCACCATC AGACACCCCA CAGTGATTCT 480 481 GTTGTCACAG AAAACAAATT ACCATCTGCT CCCTCGGGCG ATGGAGTATC ATCATCACAG 540 541 TCTGCTTCTG GACATCAAAC TGCTTGGTTC GGAGCTCCAG GAAAGATGTC TATGGCTGAC 600 601 ATTGTGAAGA TGGGTAGACC ACAGAGCAAG ACAACAAACT CACAGCAAAA TGTCAATATG 660 661 CGTTCTGAGA TTAACCACGA GCAAGAAGTT AATGCAAATC ACCAGGTCCC TGTCAAAGAC 720 721 GAATGGCCAT CGATTGAAAA GCCACCGGCT CCTAGTACAT CTTCTGTATC GGTAGCACCA 780 781 GCAGAGTCAG AGATATGCAG TGGTCCAGCT GATTTCCAAT CCGATCAGCA TCTGAGTCAC 840 841 CGGTTAGGAG ATATACGTTT AGCAGAAAAT GGCCCTTCTG AGAATCTTGG AGGCGAACAT 900 901 GACTCGGTTG CTGGTAGAAA TGTCCAAGAA GATGAGTCTG GAGTTTCGTC TGAATTTAAT 960 961 GGTAATCAGT ATACATATCA GACGCATAGC CATCGTGTAG AGCACCACAA AGATGAAGAT 1020 1021 GAGGTTTCAT CTGGTTCGGC CGAGTTGCAA CAACTAACCG TAGATGATCA AGAAGCCTCG 1080 1081 CATGAAGAGG ATAGACCTGC TGTTCTCATT CCAAATCATT TACTGATCCA TACAAAAGAA 1140 1141 TGCTCCCAAT TAAGTTTTGG AAGTTTTGGA TCAATGACTT TGAGCAACAA CGCAGAAGAG 1200 1201 ACTCCTGCTG TAGGTCAACA GGTCGAACAT TCAGATGCTA GAAATACTGA GTTCTATGGA 1260 1261 GATGAACAAC TTGGAAGTAG AGCCAATGGA AATATGGGCC ACGCACCTGC CGCTGGAAGT 1320 1321 TATGATGATT CTTTGGAATC TAGGCCGGAG GTTCTGAAAC AAGAAAACTC CGAGACTGCT 1380 1381 CAGGAGAACC AGTACGCATT TGCTCAATCT GAGCCAGGGT ATGGTAAGCA GCAGCAGCTG 1440 1441 AATACTGCAT ATGATGATGC CTCACAGACA AATGCACAGA ATCAGATGCA GAATCTTGCT 1500 1501 TCATTATCGA ATGTGATGGG GTATCCACAC TCAGTTCCCA ACAATTTATT GGCACAAAAT 1560 1561 GCGAGGGAGC TTGATTTCCA ATATGCTATT GCACAGTCTA TGCAGTCAAG AAACAACAAC 1620 1621 AATGCTTCAC CACTTGGTGG CCAAAGCATT CCCATGCCAG AGGCGCTCCG TGGCAGTGGA 1680 1681 GTTCCGGCAA CGCAGCCAAG TCAGCAAACC TTACCCGGTG GTAACATGGC AACTGGACCA 1740 1741 GCTCTTCCTC CTCAACAGCT TCCAATGCAT CCTTACTCTC AACCCACAAT GCCGCTAGCA 1800 1801 CACTTTGCAA ACATGCTTGG TTATCCTCTA ATGCCTCAGA ACTATCCATA CATGCCATCA 1860 1861 GCTTTCCCTC AAACTTTTGC TGGGAACAGC TTATACCAGC AGCAACTAGC TGCATTGCTT 1920 1921 CCCCAGTACA AGACCAATCT CTCTCCCAGT AATTTGCCTC ACTCTGCAAC AGCTCTTAAT 1980 1981 GTTGGATCCG CTGGAAACTT CCCTCTTAAC CAACACTCTA CTCCTCCCGG TACAACGATG 2040 2041 GGTTATGAAG ATGTTCTTAG TTCTCAGTAC AAAGAGAGTA GTCATCTCTT AGCACTTCAG 2100 2101 CAGCAACAGC AGCAGAACGA AAACTCGGCA ATGTGGCATC ACGGTCATGG CTCTCGAACC 2160 2161 ATGTCTGGTG TTCCGGCTAA CACATACTAC AACCTCCAAG CACAACAACA ACTACAACAG 2220 2221 GCTCAGCAAG CAGCAGGAGG GTATCGTCAA GCTCAGCAGC AACAGCATTA TGGATCTCAG 2280 2281 GGCTACCCTA ATTACTATCA GTCCCAAACA GAAATGTCCG TTGATCGCCA GCAGCAAAAC 2340 2341 CCTAGAGACG GTGCAGGGGC TCAGGCTGGT AGTCAGCCCT CGAACCAAAC CCAGCAGCTC 2400 2401 TGGCAAAACT CTTACTAA 2418 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Bro-0935 | Brassica oleracea | 99.87 | 0.0 | 1347 |
| LLPS-Brr-2970 | Brassica rapa | 87.15 | 0.0 | 1147 |
| LLPS-Orgl-1743 | Oryza glumaepatula | 76.92 | 1e-10 | 69.7 |
| LLPS-Art-0777 | Arabidopsis thaliana | 73.1 | 0.0 | 922 |
| LLPS-Lep-0493 | Leersia perrieri | 71.11 | 2e-12 | 75.1 |
| LLPS-Php-0442 | Physcomitrella patens | 70.59 | 3e-15 | 84.3 |
| LLPS-Sob-2025 | Sorghum bicolor | 68.0 | 2e-14 | 81.6 |
| LLPS-Org-0340 | Oryza glaberrima | 66.0 | 2e-13 | 78.2 |
| LLPS-Orr-0410 | Oryza rufipogon | 66.0 | 1e-13 | 79.0 |
| LLPS-Ors-0963 | Oryza sativa | 66.0 | 1e-13 | 79.0 |
| LLPS-Brd-2043 | Brachypodium distachyon | 66.0 | 6e-14 | 80.1 |
| LLPS-Orni-2197 | Oryza nivara | 66.0 | 1e-13 | 79.0 |
| LLPS-Pot-1397 | Populus trichocarpa | 65.96 | 8e-11 | 70.1 |
| LLPS-Prp-1743 | Prunus persica | 64.71 | 3e-12 | 74.7 |
| LLPS-Met-1681 | Medicago truncatula | 63.83 | 5e-10 | 67.8 |
| LLPS-Nia-2409 | Nicotiana attenuata | 62.75 | 8e-11 | 70.1 |
| LLPS-Mae-1441 | Manihot esculenta | 62.75 | 9e-12 | 73.2 |
| LLPS-Gor-1621 | Gossypium raimondii | 62.75 | 6e-11 | 70.5 |
| LLPS-Thc-2022 | Theobroma cacao | 62.75 | 6e-11 | 70.5 |
| LLPS-Hov-1955 | Hordeum vulgare | 62.0 | 5e-12 | 73.9 |
| LLPS-Phv-1258 | Phaseolus vulgaris | 61.7 | 2e-09 | 65.1 |
| LLPS-Via-2030 | Vigna angularis | 61.7 | 2e-09 | 65.5 |
| LLPS-Glm-0776 | Glycine max | 61.7 | 2e-09 | 65.9 |
| LLPS-Dac-0832 | Daucus carota | 60.78 | 5e-11 | 70.5 |
| LLPS-Mua-1786 | Musa acuminata | 60.78 | 3e-11 | 71.2 |
| LLPS-Hea-0654 | Helianthus annuus | 60.78 | 2e-10 | 68.9 |
| LLPS-Coc-1370 | Corchorus capsularis | 59.57 | 4e-08 | 61.2 |
| LLPS-Cus-0553 | Cucumis sativus | 58.82 | 8e-10 | 67.0 |
| LLPS-Sol-2308 | Solanum lycopersicum | 58.82 | 3e-10 | 68.2 |
| LLPS-Arl-2517 | Arabidopsis lyrata | 58.7 | 5e-08 | 60.8 |
| LLPS-Tra-2596 | Triticum aestivum | 58.14 | 1e-06 | 56.2 |
| LLPS-Zem-1956 | Zea mays | 56.86 | 3e-10 | 68.2 |
| LLPS-Viv-0444 | Vitis vinifera | 56.86 | 5e-10 | 67.8 |
| LLPS-Sei-2461 | Setaria italica | 56.86 | 5e-10 | 67.4 |
| LLPS-Orp-1635 | Oryza punctata | 53.06 | 1e-08 | 62.8 |
| LLPS-Amt-2192 | Amborella trichopoda | 52.94 | 3e-09 | 61.2 |
| LLPS-Orbr-1974 | Oryza brachyantha | 52.94 | 6e-09 | 63.9 |
| LLPS-Orm-1470 | Oryza meridionalis | 50.98 | 2e-08 | 62.4 |
| LLPS-Orb-1702 | Oryza barthii | 50.0 | 1e-07 | 59.7 |
| LLPS-Ori-1809 | Oryza indica | 34.57 | 1e-41 | 167 |
| LLPS-Tru-0482 | Triticum urartu | 31.61 | 6e-35 | 147 |