LLPS-Brn-3168
BnaC09g09020D
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | BnaC09g09020D protein |
| Gene Name: | BnaC09g09020D, GSBRNA2T00035708001 |
| Ensembl Gene: | GSBRNA2T00035708001 |
| Ensembl Protein: | CDY26775 |
| Organism: | Brassica napus |
| Taxa ID: | 3708 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | CDY26775 | CDY26775 |
| UniProt | A0A078GJQ9, A0A078GJQ9_BRANA | |
| GeneBank | LK032194 | CDY26775.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MTETQEETVE GKAVRTKVAE ASEETETRSG VGGKRKRVRN TKTGKKKEED VCFICFDGGD 60 61 LVLCDRRGCP KAYHPSCVNQ DEDFFRSKGK WNCGNGVCIL FTLVIYSVFN IVTFLEIIMV 120 121 YLLFVYTLVS TINLTVSLLF LIPLTESAQL DFDDKTSWES LFKDYWIDLK TQLSISPEEL 180 181 DQAKSPHKGN KSHAGKQGTA REVDYVTDEG SDSDSSPKKK KTRSRSKSGS AEKNQSPANK 240 241 SSSGETWASK ELLDVVAHMR RGDKSFLPST EVHALLLDYI KKYNLRDPRR KSQVVCDSRL 300 301 KNLFGKSHVG HFEMLNILDT HFLDKEQQQA DNIQGSIVDT DPDYVDLDEN VDHPVKSGKD 360 361 KKRKTRKKGA RKGRQSNLDD FAAVDMHNIN LIYLRRSLVE DLLEDSTAFE EKVASAFVRL 420 421 RISGNQKQDL YRLVQVVGTS KAPEPYKVGK KTTDYVLEIL NLDKTEVISI DIISNQDFTE 480 481 DECNRLRQSI KCGLINRLTV GDIQEKAIAL QEVRVKNLLD AEILRFSHLR DRASDMGHRK 540 541 EYPYLLEEIP EIHADPKMDP DYESEDEDEK EEKEKEKSLR RRSSSFNRRG RDPISPRKGG 600 601 FDYLGSSDDK VSDSLWNSGR EREKDMQHYL GSEKPRTVSL PEPPPRSSRA VAPPELSPRI 660 661 APVISTPPPP VVPQPTPKSN ESEKMWHYKD PSGKVQGPFS MAQLRKWNNT GYFPAKLEIW 720 721 KANESSLDSV LLTDALAGLF QKQGQSVDNS YPKAYSGQSS QSEPNIGSSA RTAPSVLDVP 780 781 KNSQDTWSSG GSLPSPTPTQ MTTPTAKRRN FESRWSPTKP SAQSAVQSMS FPSAQSVPSQ 840 841 ASRTDIPVVV NSAGELQPGT HPIPTPDRAN VSVNHYGSSA PLPSPTPVGG MQSWGNMQTD 900 901 KFDSHGRGRG DAPFSSQNTS ASYGTTTPSA LTSQSQPGFP ASDPWRAPVP SQSNTQTQAP 960 961 AWGMNNSQNS GQPQAPTNQN SSWGQATVVN PNMGWAGPPQ AGMSVNWAAS SVPPTGQGMP 1020 1021 NPGWGGPAQV QQPQAYSANS GWGVTGQTQS QAQVQAPGIS TSSGWMQTGQ GMQSGNSNQN 1080 1081 WGTQNQSAMQ SGGSGGNQTG YWGNQQNQNG DSGYGWNRQS SGSGGHNNFK GQRVCKFHRE 1140 1141 NGNCRKGAAC TYLHN 1155 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGACAGAGA CACAGGAGGA GACTGTTGAG GGTAAAGCAG TCAGAACAAA AGTTGCTGAA 60 61 GCATCAGAAG AAACAGAGAC AAGGTCCGGT GTTGGAGGAA AGAGGAAGCG AGTGAGAAAT 120 121 ACAAAGACAG GAAAGAAAAA AGAGGAAGAT GTTTGTTTCA TATGCTTTGA TGGGGGTGAC 180 181 CTTGTCCTTT GTGACCGCAG GGGCTGCCCA AAAGCTTACC ACCCTTCCTG TGTAAATCAA 240 241 GACGAGGATT TTTTCCGGTC AAAGGGTAAA TGGAACTGTG GTAATGGTGT ATGTATATTG 300 301 TTTACCTTAG TTATATACAG TGTCTTTAAC ATTGTTACTT TTTTAGAAAT CATAATGGTA 360 361 TATTTGCTTT TCGTTTATAC CTTAGTTTCC ACTATCAATT TGACTGTCAG TCTTCTTTTT 420 421 CTGATACCTC TCACTGAATC CGCGCAGTTG GATTTTGATG ACAAGACCAG CTGGGAATCT 480 481 CTCTTCAAGG ATTACTGGAT TGATTTGAAA ACGCAGCTAT CTATAAGTCC AGAGGAACTT 540 541 GATCAGGCTA AGAGCCCACA CAAAGGAAAT AAGTCTCATG CTGGTAAACA GGGAACAGCC 600 601 AGGGAGGTTG ACTATGTAAC TGATGAAGGA TCAGATTCGG ATAGTTCTCC AAAAAAGAAG 660 661 AAGACCAGAA GTCGATCGAA GTCTGGTTCT GCGGAGAAAA ACCAATCACC AGCTAATAAA 720 721 AGCTCGTCAG GTGAAACGTG GGCTTCCAAG GAACTTTTGG ATGTTGTCGC GCACATGAGA 780 781 CGTGGTGACA AATCTTTCTT ACCTTCCACA GAAGTACATG CGCTCCTGCT GGATTATATA 840 841 AAAAAATACA ATCTTCGTGA TCCCCGTCGT AAAAGCCAAG TTGTTTGTGA CTCCAGGCTT 900 901 AAGAATTTGT TCGGGAAATC TCATGTTGGG CACTTTGAGA TGTTAAATAT CCTTGATACC 960 961 CATTTCCTTG ATAAAGAGCA GCAGCAGGCA GATAATATTC AAGGTAGCAT TGTTGATACA 1020 1021 GACCCTGACT ATGTGGATCT TGATGAAAAC GTGGACCATC CAGTGAAAAG TGGGAAGGAT 1080 1081 AAGAAACGTA AAACACGTAA AAAGGGTGCA AGGAAAGGGC GTCAATCCAA TCTTGATGAT 1140 1141 TTTGCTGCTG TTGATATGCA CAACATTAAT TTGATATACT TGAGGCGGAG CTTGGTGGAA 1200 1201 GATCTACTTG AAGATTCTAC AGCATTCGAA GAAAAAGTAG CGAGTGCATT TGTTAGGTTA 1260 1261 AGGATATCTG GAAATCAAAA GCAAGATTTA TATCGACTGG TTCAAGTTGT TGGCACAAGC 1320 1321 AAAGCTCCTG AACCCTATAA AGTTGGCAAA AAAACAACAG ACTATGTACT TGAGATATTG 1380 1381 AACTTGGACA AAACAGAAGT GATATCCATC GACATTATAT CAAATCAAGA TTTCACTGAG 1440 1441 GATGAATGCA ATCGTCTAAG GCAGAGCATA AAATGTGGAT TAATCAACAG GCTGACAGTG 1500 1501 GGTGATATAC AAGAAAAGGC CATAGCGCTG CAGGAAGTGA GGGTAAAAAA CTTGTTGGAC 1560 1561 GCAGAGATCC TACGTTTCAG CCATTTGCGT GATCGTGCTA GCGACATGGG CCACAGAAAA 1620 1621 GAATATCCTT ATCTGCTAGA AGAAATTCCA GAAATACATG CTGATCCCAA GATGGACCCA 1680 1681 GATTATGAGT CCGAAGACGA AGATGAAAAA GAAGAAAAAG AAAAAGAGAA AAGTCTGAGG 1740 1741 AGACGAAGTA GTAGCTTCAA CAGAAGAGGA AGAGACCCGA TATCGCCACG AAAGGGAGGA 1800 1801 TTTGATTATC TTGGTAGTTC TGACGACAAG GTTAGTGATA GTCTGTGGAA TTCAGGTAGA 1860 1861 GAAAGAGAAA AAGACATGCA ACACTATTTA GGCTCTGAGA AGCCGAGAAC TGTTTCTCTC 1920 1921 CCCGAACCTC CTCCCAGAAG TTCCCGTGCT GTTGCGCCAC CAGAATTGTC TCCTAGAATT 1980 1981 GCCCCCGTAA TCTCAACGCC ACCTCCTCCT GTTGTTCCGC AGCCTACTCC CAAGTCAAAT 2040 2041 GAGTCAGAGA AAATGTGGCA TTACAAGGAC CCATCTGGTA AAGTTCAAGG ACCTTTTTCA 2100 2101 ATGGCGCAGC TCCGTAAGTG GAACAACACT GGGTACTTCC CTGCTAAGTT GGAAATCTGG 2160 2161 AAAGCCAACG AGTCATCTTT GGACTCTGTT CTCCTGACTG ATGCATTGGC TGGGCTGTTT 2220 2221 CAGAAGCAAG GCCAGTCGGT GGATAATAGC TACCCGAAAG CTTATTCTGG TCAATCCAGC 2280 2281 CAGTCTGAAC CCAATATAGG TTCTTCTGCT AGGACCGCTC CATCAGTCCT TGACGTTCCC 2340 2341 AAGAATTCTC AGGATACTTG GAGTTCAGGC GGAAGCCTTC CATCGCCTAC TCCGACTCAA 2400 2401 ATGACAACCC CAACGGCAAA AAGGAGAAAT TTTGAGAGCA GATGGTCTCC AACCAAGCCT 2460 2461 TCTGCACAGT CAGCTGTCCA GTCGATGAGT TTTCCTTCAG CACAATCTGT CCCGAGTCAA 2520 2521 GCTTCAAGGA CAGATATCCC TGTGGTTGTA AACTCTGCTG GTGAGTTGCA GCCTGGAACC 2580 2581 CACCCAATTC CAACACCAGA TCGGGCTAAC GTTTCTGTTA ATCACTATGG TTCTTCTGCT 2640 2641 CCTCTTCCAT CTCCAACACC GGTTGGCGGA ATGCAAAGCT GGGGTAACAT GCAGACGGAT 2700 2701 AAATTTGATT CACATGGTCG TGGAAGAGGT GATGCTCCAT TTTCTTCTCA GAATACCTCT 2760 2761 GCGTCTTATG GCACCACAAC TCCAAGTGCT CTCACCTCGC AAAGTCAACC AGGGTTTCCA 2820 2821 GCATCTGATC CATGGAGGGC TCCAGTTCCA AGCCAATCAA ATACTCAGAC TCAGGCGCCA 2880 2881 GCATGGGGTA TGAACAACAG TCAAAACTCG GGACAACCTC AGGCTCCAAC AAACCAAAAC 2940 2941 AGCAGCTGGG GTCAAGCGAC TGTTGTAAAT CCAAACATGG GATGGGCTGG TCCTCCTCAA 3000 3001 GCTGGAATGA GCGTAAACTG GGCTGCATCT TCGGTTCCAC CAACTGGTCA GGGAATGCCT 3060 3061 AATCCTGGAT GGGGCGGGCC CGCCCAAGTA CAACAACCAC AAGCTTATTC GGCAAACTCC 3120 3121 GGGTGGGGTG TAACAGGCCA AACTCAATCC CAAGCCCAAG TTCAAGCTCC AGGGATTAGT 3180 3181 ACAAGCTCTG GATGGATGCA GACAGGTCAA GGGATGCAGT CTGGGAACAG TAATCAAAAC 3240 3241 TGGGGAACTC AAAACCAGTC AGCAATGCAA AGCGGTGGGT CAGGAGGGAA CCAAACTGGT 3300 3301 TACTGGGGAA ACCAACAGAA CCAGAATGGA GATTCTGGGT ATGGTTGGAA TAGGCAGTCA 3360 3361 AGTGGAAGTG GTGGGCATAA CAACTTCAAA GGGCAAAGAG TATGCAAGTT CCATCGAGAA 3420 3421 AATGGAAATT GCAGGAAAGG AGCAGCCTGC ACTTACCTCC ACAACTAA 3468 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Bro-2041 | Brassica oleracea | 90.32 | 0.0 | 1850 |
| LLPS-Brr-0499 | Brassica rapa | 89.03 | 0.0 | 1827 |
| LLPS-Art-1146 | Arabidopsis thaliana | 72.19 | 0.0 | 1409 |
| LLPS-Sei-2246 | Setaria italica | 69.84 | 2e-20 | 102 |
| LLPS-Arl-0666 | Arabidopsis lyrata | 69.42 | 0.0 | 686 |
| LLPS-Amt-1170 | Amborella trichopoda | 67.16 | 1e-20 | 103 |
| LLPS-Orp-0768 | Oryza punctata | 66.67 | 6e-20 | 100 |
| LLPS-Org-0077 | Oryza glaberrima | 66.67 | 6e-20 | 100 |
| LLPS-Orm-1938 | Oryza meridionalis | 66.67 | 6e-20 | 100 |
| LLPS-Orr-0869 | Oryza rufipogon | 66.67 | 6e-20 | 100 |
| LLPS-Orni-0717 | Oryza nivara | 66.67 | 6e-20 | 100 |
| LLPS-Orb-0806 | Oryza barthii | 66.67 | 6e-20 | 100 |
| LLPS-Orgl-2159 | Oryza glumaepatula | 66.67 | 6e-20 | 100 |
| LLPS-Hea-2654 | Helianthus annuus | 65.57 | 3e-18 | 95.5 |
| LLPS-Orbr-2285 | Oryza brachyantha | 65.08 | 1e-19 | 99.8 |
| LLPS-Php-1874 | Physcomitrella patens | 61.9 | 5e-18 | 94.7 |
| LLPS-Xet-1554 | Xenopus tropicalis | 57.78 | 8e-07 | 57.8 |
| LLPS-Via-1270 | Vigna angularis | 57.52 | 7e-143 | 468 |
| LLPS-Viv-2224 | Vitis vinifera | 57.14 | 1e-19 | 100 |
| LLPS-Ors-2126 | Oryza sativa | 56.56 | 3e-31 | 133 |
| LLPS-Sem-0079 | Selaginella moellendorffii | 53.57 | 1e-09 | 67.4 |
| LLPS-Sol-1697 | Solanum lycopersicum | 53.45 | 6e-156 | 515 |
| LLPS-Vir-1105 | Vigna radiata | 53.36 | 9e-175 | 559 |
| LLPS-Fec-2742 | Felis catus | 53.33 | 6e-07 | 58.5 |
| LLPS-Urm-3871 | Ursus maritimus | 53.33 | 6e-07 | 58.5 |
| LLPS-Anc-0977 | Anolis carolinensis | 53.33 | 9e-06 | 54.7 |
| LLPS-Caf-2704 | Canis familiaris | 53.33 | 6e-07 | 58.2 |
| LLPS-Mum-4525 | Mus musculus | 53.33 | 1e-06 | 57.4 |
| LLPS-Ran-1744 | Rattus norvegicus | 53.33 | 6e-07 | 58.2 |
| LLPS-Aim-2222 | Ailuropoda melanoleuca | 53.33 | 3e-06 | 55.8 |
| LLPS-Mup-2666 | Mustela putorius furo | 53.33 | 5e-07 | 58.5 |
| LLPS-Ict-3844 | Ictidomys tridecemlineatus | 52.17 | 4e-07 | 58.9 |
| LLPS-Tru-1343 | Triticum urartu | 51.76 | 9e-12 | 74.3 |
| LLPS-Scm-3417 | Scophthalmus maximus | 51.11 | 5e-06 | 55.5 |
| LLPS-Pof-1726 | Poecilia formosa | 51.11 | 2e-06 | 56.6 |
| LLPS-Orl-2408 | Oryzias latipes | 51.11 | 2e-06 | 57.0 |
| LLPS-Lep-2325 | Leersia perrieri | 47.55 | 8e-148 | 494 |
| LLPS-Sob-1335 | Sorghum bicolor | 47.1 | 1e-145 | 488 |
| LLPS-Nia-1368 | Nicotiana attenuata | 46.29 | 3e-141 | 470 |
| LLPS-Cus-2053 | Cucumis sativus | 45.97 | 5e-175 | 568 |
| LLPS-Zem-1012 | Zea mays | 45.07 | 4e-141 | 475 |
| LLPS-Sus-2857 | Sus scrofa | 45.0 | 9e-08 | 60.8 |
| LLPS-Brd-1559 | Brachypodium distachyon | 45.0 | 3e-06 | 52.4 |
| LLPS-Ova-3608 | Ovis aries | 45.0 | 8e-08 | 61.2 |
| LLPS-Ten-2882 | Tetraodon nigroviridis | 44.44 | 7e-06 | 54.7 |
| LLPS-Thc-2204 | Theobroma cacao | 44.08 | 0.0 | 837 |
| LLPS-Gor-2491 | Gossypium raimondii | 43.93 | 0.0 | 800 |
| LLPS-Coc-2326 | Corchorus capsularis | 43.78 | 0.0 | 781 |
| LLPS-Otg-1158 | Otolemur garnettii | 43.75 | 2e-07 | 60.5 |
| LLPS-Orc-3989 | Oryctolagus cuniculus | 43.75 | 2e-07 | 60.1 |
| LLPS-Pap-3797 | Pan paniscus | 43.75 | 1e-07 | 60.5 |
| LLPS-Pat-0138 | Pan troglodytes | 43.75 | 1e-07 | 60.5 |
| LLPS-Hos-0942 | Homo sapiens | 43.75 | 1e-07 | 60.5 |
| LLPS-Loa-1350 | Loxodonta africana | 43.75 | 2e-07 | 60.1 |
| LLPS-Man-4635 | Macaca nemestrina | 43.75 | 2e-07 | 59.7 |
| LLPS-Eqc-1106 | Equus caballus | 43.75 | 2e-07 | 60.1 |
| LLPS-Mam-3868 | Macaca mulatta | 43.75 | 2e-07 | 60.1 |
| LLPS-Gog-1663 | Gorilla gorilla | 43.75 | 1e-07 | 60.5 |
| LLPS-Caj-0355 | Callithrix jacchus | 43.75 | 2e-07 | 60.1 |
| LLPS-Fud-1810 | Fukomys damarensis | 43.75 | 2e-07 | 60.1 |
| LLPS-Ora-3318 | Ornithorhynchus anatinus | 43.75 | 5e-08 | 61.6 |
| LLPS-Chs-3862 | Chlorocebus sabaeus | 43.75 | 2e-07 | 60.1 |
| LLPS-Maf-4279 | Macaca fascicularis | 43.75 | 2e-07 | 60.1 |
| LLPS-Aon-3369 | Aotus nancymaae | 43.75 | 2e-07 | 60.1 |
| LLPS-Cea-3338 | Cercocebus atys | 43.75 | 2e-07 | 60.1 |
| LLPS-Paa-4630 | Papio anubis | 43.75 | 2e-07 | 60.1 |
| LLPS-Mal-3856 | Mandrillus leucophaeus | 43.75 | 2e-07 | 60.1 |
| LLPS-Bot-0277 | Bos taurus | 43.75 | 1e-06 | 57.4 |
| LLPS-Mua-2332 | Musa acuminata | 43.73 | 3e-172 | 550 |
| LLPS-Mae-1854 | Manihot esculenta | 43.58 | 0.0 | 836 |
| LLPS-Met-1488 | Medicago truncatula | 43.02 | 0.0 | 722 |
| LLPS-Prp-2180 | Prunus persica | 43.0 | 0.0 | 749 |
| LLPS-Pes-3202 | Pelodiscus sinensis | 42.5 | 9e-08 | 60.8 |
| LLPS-Fia-1771 | Ficedula albicollis | 42.5 | 3e-07 | 59.3 |
| LLPS-Mod-3884 | Monodelphis domestica | 42.5 | 1e-07 | 60.5 |
| LLPS-Meg-0161 | Meleagris gallopavo | 42.5 | 3e-07 | 59.3 |
| LLPS-Gaga-3385 | Gallus gallus | 42.5 | 3e-07 | 59.3 |
| LLPS-Tag-1811 | Taeniopygia guttata | 42.5 | 3e-07 | 59.3 |
| LLPS-Cap-4429 | Cavia porcellus | 42.5 | 2e-07 | 60.1 |
| LLPS-Sah-4041 | Sarcophilus harrisii | 42.5 | 2e-07 | 60.1 |
| LLPS-Dio-1991 | Dipodomys ordii | 42.5 | 9e-07 | 57.8 |
| LLPS-Pot-2313 | Populus trichocarpa | 42.39 | 0.0 | 771 |
| LLPS-Cas-3415 | Carlito syrichta | 41.25 | 3e-06 | 56.2 |
| LLPS-Glm-2688 | Glycine max | 41.01 | 0.0 | 745 |
| LLPS-Phv-1328 | Phaseolus vulgaris | 40.73 | 0.0 | 733 |
| LLPS-Hov-2054 | Hordeum vulgare | 40.32 | 7e-06 | 51.6 |
| LLPS-Lac-3627 | Latimeria chalumnae | 38.75 | 3e-06 | 55.8 |
| LLPS-Sot-0847 | Solanum tuberosum | 38.1 | 9e-06 | 51.2 |
| LLPS-Asm-3739 | Astyanax mexicanus | 37.5 | 4e-06 | 55.8 |
| LLPS-Dac-2442 | Daucus carota | 37.28 | 0.0 | 637 |
| LLPS-Tra-1028 | Triticum aestivum | 37.02 | 3e-180 | 581 |
| LLPS-Anp-2198 | Anas platyrhynchos | 34.83 | 2e-06 | 56.6 |