LLPS-Brn-2612
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Ensembl Gene: | GSBRNA2T00121767001 |
| Ensembl Protein: | CDY05944 |
| Organism: | Brassica napus |
| Taxa ID: | 3708 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MYNGIGLQTA RGSGTNGYVQ TNKFFVRPRN GGKPVSGGKG FADDQGTAGL SKKPNKDILE 60 61 HDRKRQIHLK LAVLEDELAD QGFSDAEIAE KLEEARLKFE AAAASEESDA VGDSKISDTQ 120 121 THQVAARKEK QMEAFRAALG LRDQEPAEEG IIEEEPTGLV KERREHSFLD RGSGRKRDEG 180 181 VEVKDGQGKE SKKERGDDDV DEVKRHKKKV SKKRRHDDDD DDDDDDDDDD DSSESDGKGR 240 241 DRRRRSKKKA KGRKQESDSS SSDSDSDSDS GEKRRRKVTK KRGRSRRSVS SESEAESDDS 300 301 LKLRKSHKKS RPTNQSVSKD SMDKPDEGRG GRKRHDSDVS EPESEDEKQQ LRKREEAYRS 360 361 GQKPKRDQED LESDHLKDMH RGGKKAARDS DDSEAEYGNN RKQLRSKVEV YSGGMSKKRA 420 421 EEEIVSKHDY DRKQVARDSS DDSEAEYENR RKLKDDSYQR GRKQIREEDH SRYGRDRYRS 480 481 DDAGQRRGTV KDVDDRYRGQ ASEEEDENDR GRYRQRRETV KEDDTEYKRG RERYRGDKED 540 541 RYRDDVAAGK RHVTGKEDED DERVSREREY SNKGRSHYDG RSSGKRSSYA DRD 593 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGTACAACG GAATAGGGTT ACAGACCGCG AGAGGATCTG GGACTAACGG TTACGTTCAG 60 61 ACGAACAAGT TTTTCGTGAG GCCTAGGAAC GGTGGTAAGC CCGTTAGTGG AGGAAAAGGG 120 121 TTTGCGGATG ATCAGGGAAC CGCTGGTTTA TCCAAGAAAC CCAACAAAGA CATCCTTGAG 180 181 CATGACCGTA AGCGCCAGAT TCATCTCAAG CTTGCTGTGC TTGAAGACGA GCTTGCAGAT 240 241 CAGGGCTTCT CTGATGCCGA GATTGCTGAG AAGCTTGAGG AAGCAAGGTT GAAGTTTGAA 300 301 GCTGCTGCTG CCTCTGAGGA GAGTGATGCG GTTGGTGATT CGAAGATCTC CGATACACAG 360 361 ACTCATCAGG TTGCTGCGAG GAAGGAGAAG CAGATGGAAG CTTTTCGAGC TGCGCTTGGT 420 421 TTGCGTGATC AGGAGCCGGC TGAAGAAGGG ATCATTGAGG AGGAGCCAAC AGGGTTAGTG 480 481 AAAGAGAGAC GGGAACATTC GTTTTTGGAC CGTGGTAGTG GGAGGAAGAG AGATGAGGGT 540 541 GTTGAGGTGA AAGATGGCCA GGGTAAGGAA AGCAAGAAGG AGCGTGGTGA TGATGATGTG 600 601 GATGAAGTGA AGCGTCACAA GAAGAAAGTG AGCAAGAAGA GAAGACATGA TGATGATGAT 660 661 GATGATGATG ATGATGATGA TGATGATGAT GACTCATCTG AGTCTGATGG TAAGGGACGT 720 721 GACCGCAGAA GGCGCTCTAA GAAGAAGGCT AAGGGGCGTA AACAAGAGAG TGACTCTAGC 780 781 AGCTCCGATT CTGACTCTGA CAGTGATAGC GGAGAGAAGA GGAGAAGGAA GGTTACAAAG 840 841 AAACGTGGTA GAAGCAGGAG AAGTGTCTCT TCTGAATCTG AAGCTGAGAG TGACGACAGC 900 901 CTGAAACTTC GGAAGTCACA CAAAAAGAGT CGACCCACCA ACCAATCAGT TTCAAAAGAT 960 961 TCAATGGACA AACCTGATGA AGGAAGAGGT GGGCGAAAGA GACATGATTC TGATGTTAGC 1020 1021 GAGCCTGAGT CTGAGGATGA GAAACAACAA CTGCGAAAGA GAGAAGAAGC TTACCGCAGT 1080 1081 GGACAAAAGC CGAAAAGAGA TCAGGAAGAC TTGGAGTCTG ATCATCTTAA GGACATGCAT 1140 1141 AGAGGTGGCA AGAAAGCTGC AAGAGACTCT GATGACAGTG AGGCCGAGTA TGGGAACAAT 1200 1201 AGGAAACAGC TGCGCAGTAA GGTGGAAGTT TACAGTGGAG GAATGAGCAA GAAGAGAGCT 1260 1261 GAAGAAGAGA TCGTGTCCAA GCATGATTAT GATAGGAAGC AAGTTGCAAG AGACTCTTCT 1320 1321 GATGACAGTG AGGCTGAGTA TGAAAATAGG AGGAAGCTGA AGGATGACAG TTACCAAAGA 1380 1381 GGAAGGAAGC AGATAAGAGA GGAGGACCAC AGTCGCTATG GAAGGGACAG GTATAGAAGC 1440 1441 GATGATGCTG GTCAGAGACG TGGAACTGTT AAGGATGTTG ATGATAGGTA TAGAGGTCAA 1500 1501 GCCAGCGAGG AAGAGGATGA AAATGATAGG GGTCGATACA GACAGAGACG TGAAACGGTT 1560 1561 AAGGAGGATG ATACGGAGTA CAAGCGTGGC AGGGAGAGGT ACAGAGGCGA TAAGGAGGAC 1620 1621 AGGTATAGAG ATGATGTTGC TGCTGGAAAA AGACATGTGA CGGGTAAGGA AGACGAAGAT 1680 1681 GATGAAAGAG TTAGCAGGGA GCGTGAGTAC TCAAACAAGG GTCGAAGTCA TTACGATGGC 1740 1741 CGATCAAGCG GGAAGAGGTC CTCCTACGCT GATAGAGATT AA 1782 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Bro-0254 | Brassica oleracea | 100.0 | 6e-151 | 454 |
| LLPS-Brr-0001 | Brassica rapa | 95.05 | 1e-138 | 422 |
| LLPS-Arl-0325 | Arabidopsis lyrata | 89.36 | 3e-21 | 92.8 |
| LLPS-Art-0696 | Arabidopsis thaliana | 74.88 | 2e-73 | 252 |
| LLPS-Met-2123 | Medicago truncatula | 72.92 | 1e-40 | 148 |
| LLPS-Viv-2267 | Vitis vinifera | 71.23 | 1e-55 | 206 |
| LLPS-Glm-0097 | Glycine max | 68.49 | 6e-52 | 195 |
| LLPS-Dac-0183 | Daucus carota | 68.49 | 6e-53 | 196 |
| LLPS-Phv-2330 | Phaseolus vulgaris | 66.44 | 5e-52 | 195 |
| LLPS-Nia-1361 | Nicotiana attenuata | 64.79 | 4e-50 | 189 |
| LLPS-Sot-1604 | Solanum tuberosum | 63.19 | 2e-42 | 165 |
| LLPS-Sol-0003 | Solanum lycopersicum | 63.12 | 2e-41 | 162 |
| LLPS-Hea-2485 | Helianthus annuus | 61.9 | 9e-48 | 182 |
| LLPS-Mae-0667 | Manihot esculenta | 60.31 | 1e-54 | 203 |
| LLPS-Thc-0054 | Theobroma cacao | 60.0 | 5e-45 | 162 |
| LLPS-Amt-0523 | Amborella trichopoda | 58.45 | 1e-41 | 164 |
| LLPS-Coc-0022 | Corchorus capsularis | 58.1 | 5e-49 | 186 |
| LLPS-Prp-0207 | Prunus persica | 57.73 | 3e-54 | 202 |
| LLPS-Pot-1386 | Populus trichocarpa | 57.67 | 3e-55 | 204 |
| LLPS-Cus-0534 | Cucumis sativus | 56.68 | 4e-52 | 196 |
| LLPS-Via-0292 | Vigna angularis | 56.1 | 6e-53 | 198 |
| LLPS-Php-0864 | Physcomitrella patens | 55.48 | 4e-40 | 155 |
| LLPS-Orm-0940 | Oryza meridionalis | 55.48 | 9e-35 | 144 |
| LLPS-Tra-0032 | Triticum aestivum | 55.32 | 1e-34 | 133 |
| LLPS-Zem-1873 | Zea mays | 54.9 | 5e-32 | 129 |
| LLPS-Orgl-0882 | Oryza glumaepatula | 54.84 | 5e-31 | 132 |
| LLPS-Vir-1625 | Vigna radiata | 54.81 | 2e-52 | 196 |
| LLPS-Orb-1587 | Oryza barthii | 54.55 | 8e-17 | 82.8 |
| LLPS-Mua-2305 | Musa acuminata | 54.55 | 7e-41 | 161 |
| LLPS-Orp-0566 | Oryza punctata | 53.85 | 3e-29 | 127 |
| LLPS-Gor-1490 | Gossypium raimondii | 53.48 | 3e-47 | 182 |
| LLPS-Orbr-0344 | Oryza brachyantha | 53.16 | 1e-25 | 116 |
| LLPS-Hov-1960 | Hordeum vulgare | 53.12 | 7e-24 | 102 |
| LLPS-Brd-1118 | Brachypodium distachyon | 52.9 | 2e-32 | 137 |
| LLPS-Orni-0477 | Oryza nivara | 52.5 | 1e-29 | 128 |
| LLPS-Orr-1828 | Oryza rufipogon | 52.5 | 1e-29 | 128 |
| LLPS-Lep-0708 | Leersia perrieri | 51.61 | 1e-28 | 125 |
| LLPS-Ori-1826 | Oryza indica | 50.59 | 8e-30 | 129 |
| LLPS-Sei-1200 | Setaria italica | 50.52 | 4e-22 | 99.0 |
| LLPS-Org-2203 | Oryza glaberrima | 50.0 | 4e-09 | 63.5 |
| LLPS-Drm-0065 | Drosophila melanogaster | 47.57 | 6e-15 | 82.8 |
| LLPS-Sob-2288 | Sorghum bicolor | 46.81 | 3e-25 | 106 |
| LLPS-Tru-0778 | Triticum urartu | 44.16 | 1e-17 | 90.9 |
| LLPS-Usm-0299 | Ustilago maydis | 42.0 | 2e-10 | 66.6 |
| LLPS-Xim-0319 | Xiphophorus maculatus | 41.78 | 2e-21 | 103 |
| LLPS-Pof-1361 | Poecilia formosa | 41.78 | 6e-21 | 102 |
| LLPS-Mod-1339 | Monodelphis domestica | 41.45 | 2e-21 | 103 |
| LLPS-Xet-2979 | Xenopus tropicalis | 41.26 | 4e-18 | 93.2 |
| LLPS-Orl-0682 | Oryzias latipes | 41.1 | 5e-21 | 102 |
| LLPS-Scm-0721 | Scophthalmus maximus | 41.1 | 4e-21 | 102 |
| LLPS-Orn-0369 | Oreochromis niloticus | 41.1 | 4e-20 | 98.2 |
| LLPS-Map-1038 | Magnaporthe poae | 40.85 | 1e-08 | 59.3 |
| LLPS-Mea-0892 | Mesocricetus auratus | 40.79 | 2e-18 | 94.0 |
| LLPS-Mum-0293 | Mus musculus | 40.79 | 6e-19 | 95.9 |
| LLPS-Bot-0770 | Bos taurus | 40.79 | 1e-18 | 94.7 |
| LLPS-Cas-0028 | Carlito syrichta | 40.79 | 9e-19 | 95.5 |
| LLPS-Lac-0910 | Latimeria chalumnae | 40.67 | 6e-19 | 95.1 |
| LLPS-Tar-2126 | Takifugu rubripes | 40.41 | 2e-21 | 103 |
| LLPS-Sah-1314 | Sarcophilus harrisii | 40.4 | 7e-19 | 95.5 |
| LLPS-Cea-0231 | Cercocebus atys | 40.4 | 9e-19 | 95.5 |
| LLPS-Aon-1209 | Aotus nancymaae | 40.4 | 9e-19 | 95.1 |
| LLPS-Sus-1394 | Sus scrofa | 40.4 | 8e-19 | 95.5 |
| LLPS-Chs-2340 | Chlorocebus sabaeus | 40.4 | 9e-19 | 95.5 |
| LLPS-Maf-2780 | Macaca fascicularis | 40.4 | 9e-19 | 95.5 |
| LLPS-Caj-1541 | Callithrix jacchus | 40.4 | 7e-19 | 95.5 |
| LLPS-Fud-2240 | Fukomys damarensis | 40.4 | 8e-19 | 95.5 |
| LLPS-Gog-0817 | Gorilla gorilla | 40.4 | 7e-19 | 95.5 |
| LLPS-Mup-2734 | Mustela putorius furo | 40.4 | 6e-19 | 95.9 |
| LLPS-Aim-1712 | Ailuropoda melanoleuca | 40.4 | 6e-19 | 95.9 |
| LLPS-Mal-1215 | Mandrillus leucophaeus | 40.4 | 8e-19 | 95.5 |
| LLPS-Paa-0797 | Papio anubis | 40.4 | 9e-19 | 95.5 |
| LLPS-Loa-1379 | Loxodonta africana | 40.4 | 9e-19 | 95.1 |
| LLPS-Man-3193 | Macaca nemestrina | 40.4 | 8e-19 | 95.5 |
| LLPS-Fec-0123 | Felis catus | 40.4 | 5e-19 | 95.9 |
| LLPS-Urm-0392 | Ursus maritimus | 40.4 | 5e-19 | 95.9 |
| LLPS-Pap-1305 | Pan paniscus | 40.4 | 8e-19 | 95.5 |
| LLPS-Pat-2353 | Pan troglodytes | 40.4 | 9e-19 | 95.1 |
| LLPS-Hos-0038 | Homo sapiens | 40.4 | 7e-19 | 95.5 |
| LLPS-Rhb-2224 | Rhinopithecus bieti | 40.4 | 1e-18 | 94.7 |
| LLPS-Otg-2938 | Otolemur garnettii | 40.4 | 1e-18 | 94.7 |
| LLPS-Mam-1343 | Macaca mulatta | 40.4 | 8e-19 | 95.5 |
| LLPS-Spr-1181 | Sporisorium reilianum | 40.4 | 1e-12 | 74.3 |
| LLPS-Eqc-2874 | Equus caballus | 40.4 | 8e-19 | 95.5 |
| LLPS-Cap-0171 | Cavia porcellus | 40.4 | 1e-18 | 95.1 |
| LLPS-Caf-1702 | Canis familiaris | 40.4 | 6e-19 | 95.9 |
| LLPS-Poa-2451 | Pongo abelii | 40.4 | 7e-19 | 95.5 |
| LLPS-Ict-2576 | Ictidomys tridecemlineatus | 40.4 | 6e-19 | 95.9 |
| LLPS-Asm-1394 | Astyanax mexicanus | 40.14 | 7e-19 | 90.5 |
| LLPS-Dar-1486 | Danio rerio | 40.14 | 1e-20 | 101 |
| LLPS-Anc-0022 | Anolis carolinensis | 39.33 | 9e-20 | 98.2 |
| LLPS-Gaa-0877 | Gasterosteus aculeatus | 39.04 | 1e-18 | 93.6 |
| LLPS-Ten-0252 | Tetraodon nigroviridis | 39.04 | 1e-20 | 100 |
| LLPS-Icp-1171 | Ictalurus punctatus | 38.82 | 3e-20 | 99.8 |
| LLPS-Cae-0763 | Caenorhabditis elegans | 38.3 | 9e-16 | 84.0 |
| LLPS-Scf-1651 | Scleropages formosus | 38.03 | 5e-17 | 84.0 |
| LLPS-Gaga-2525 | Gallus gallus | 37.89 | 3e-18 | 89.4 |
| LLPS-Pug-0714 | Puccinia graminis | 37.59 | 2e-15 | 80.1 |
| LLPS-Chr-1476 | Chlamydomonas reinhardtii | 37.5 | 8e-15 | 82.0 |
| LLPS-Ova-0391 | Ovis aries | 36.88 | 8e-11 | 69.7 |
| LLPS-Trv-1580 | Trichoderma virens | 36.88 | 4e-14 | 75.5 |
| LLPS-Cog-1302 | Colletotrichum gloeosporioides | 36.62 | 2e-12 | 70.5 |
| LLPS-Coo-1134 | Colletotrichum orbiculare | 36.3 | 2e-10 | 65.1 |
| LLPS-Mel-0763 | Melampsora laricipopulina | 36.17 | 6e-14 | 75.5 |
| LLPS-Fus-1349 | Fusarium solani | 36.17 | 5e-12 | 69.3 |
| LLPS-Dos-0645 | Dothistroma septosporum | 36.17 | 2e-16 | 82.4 |
| LLPS-Put-0771 | Puccinia triticina | 36.11 | 9e-13 | 72.0 |
| LLPS-Fuv-1204 | Fusarium verticillioides | 35.92 | 1e-10 | 65.5 |
| LLPS-Fuo-0727 | Fusarium oxysporum | 35.92 | 1e-10 | 65.5 |
| LLPS-Crn-0611 | Cryptococcus neoformans | 35.86 | 1e-15 | 80.9 |
| LLPS-Cogr-1639 | Colletotrichum graminicola | 35.42 | 9e-12 | 68.6 |
| LLPS-Abg-1312 | Absidia glauca | 35.21 | 2e-11 | 68.2 |
| LLPS-Pytr-1203 | Pyrenophora triticirepentis | 34.97 | 4e-17 | 85.1 |
| LLPS-Ved-1175 | Verticillium dahliae | 34.93 | 9e-13 | 72.0 |
| LLPS-Zyt-1023 | Zymoseptoria tritici | 34.75 | 1e-15 | 80.5 |
| LLPS-Beb-1122 | Beauveria bassiana | 34.72 | 6e-09 | 60.1 |
| LLPS-Lem-1389 | Leptosphaeria maculans | 34.27 | 2e-16 | 83.2 |
| LLPS-Pyt-0072 | Pyrenophora teres | 33.8 | 8e-17 | 84.0 |
| LLPS-Nec-0818 | Neurospora crassa | 33.79 | 1e-09 | 64.3 |
| LLPS-Gag-0069 | Gaeumannomyces graminis | 33.57 | 1e-11 | 68.6 |
| LLPS-Phn-1445 | Phaeosphaeria nodorum | 32.62 | 3e-15 | 79.0 |