LLPS-Brn-2557
BnaC06g06250D
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | BnaC06g06250D protein |
| Gene Name: | BnaC06g06250D, GSBRNA2T00033530001 |
| Ensembl Gene: | GSBRNA2T00033530001 |
| Ensembl Protein: | CDY25999 |
| Organism: | Brassica napus |
| Taxa ID: | 3708 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus, P-body, Stress granule, Others | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | CDY25999 | CDY25999 |
| UniProt | A0A078GL72, A0A078GL72_BRANA | |
| GeneBank | LK032184 | CDY25999.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MSLIKILTII FFFSFRKHRK TTTTALIKLR TGTLFSLLNN KLHAVFDQPK QTFSLALAHS 60 61 RHVFTRQWRR RRVTATLVSL HFSSPRRTSL LVNRRSFSVS ATMASHSKKV LIPVAHGTEP 120 121 FEAVVMIDVL RRGGADVTVA SVENQVGVDA CHGIKMVADT LLSDITDSVF DLIMLPGGLP 180 181 GGETLKNCKA LENMVKKQDA DGRLNAAICC APALALGTWG LLEGKKATCY PVFMEKLGAT 240 241 CATAVESRVE IDGRIVTSRG PGTTMEFSVA LVEQLFGKEK AAEVSAPLVM RPNPGDEYTI 300 301 TELNQIKWSY ENTPQILVPI ADGSEEMEAV AIIDVLRRAK ANVVVAALGN SLEVVASRKV 360 361 KLVADVLLNE AEKNSYDLIV LPGGLGGAEA FASSEKLVNM LKKQAESNKP YGAVCASPAL 420 421 VFEPHGLLKG KKATAYPPMC NKLSDQSHIE HRVLVDGNLI TSRGPGTSLE CALAIVEKFY 480 481 GREKGLQLSK ATLV 494 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGAGTTTGA TTAAGATTCT GACCATTATT TTTTTCTTCA GTTTTCGAAA GCACAGAAAA 60 61 ACGACAACAA CTGCATTAAT AAAACTAAGA ACCGGGACGT TGTTCTCCCT CTTAAACAAC 120 121 AAACTACATG CCGTCTTCGA TCAACCAAAA CAAACTTTTT CTCTTGCTCT CGCACATTCT 180 181 AGACACGTGT TTACTCGTCA ATGGCGTCGT CGTCGTGTCA CAGCTACTTT AGTGTCACTC 240 241 CATTTCTCAT CTCCGAGACG AACTTCTCTT CTCGTGAATC GACGATCCTT CTCCGTCTCT 300 301 GCGACTATGG CTTCACATTC TAAGAAGGTT TTGATTCCCG TTGCGCACGG TACGGAGCCG 360 361 TTCGAAGCGG TGGTGATGAT CGATGTGCTG CGGCGAGGCG GCGCGGATGT AACGGTGGCC 420 421 TCCGTGGAGA ATCAGGTTGG CGTCGATGCG TGCCATGGGA TCAAGATGGT GGCGGATACT 480 481 CTTCTCTCTG ATATCACCGA CTCCGTTTTC GACCTTATCA TGCTCCCTGG AGGACTACCT 540 541 GGGGGAGAGA CTCTTAAGAA CTGTAAAGCT CTGGAGAATA TGGTCAAGAA ACAAGACGCA 600 601 GATGGACGGC TTAACGCTGC TATCTGTTGT GCCCCGGCGT TGGCGCTTGG TACTTGGGGT 660 661 CTGCTAGAGG GTAAAAAGGC GACATGTTAC CCAGTTTTTA TGGAGAAGCT AGGAGCAACA 720 721 TGTGCAACAG CTGTTGAGTC GAGAGTGGAG ATAGATGGGA GGATAGTGAC CAGTAGAGGG 780 781 CCTGGAACTA CTATGGAGTT CTCTGTCGCC CTTGTGGAGC AATTGTTTGG GAAAGAGAAA 840 841 GCTGCTGAAG TCTCTGCTCC ATTGGTGATG CGTCCCAACC CTGGTGATGA GTACACTATT 900 901 ACTGAGCTTA ACCAAATAAA GTGGTCGTAT GAGAATACCC CACAGATTCT TGTGCCCATT 960 961 GCAGATGGCT CTGAGGAAAT GGAAGCTGTT GCAATCATTG ATGTTCTGAG ACGGGCAAAA 1020 1021 GCAAATGTTG TCGTTGCTGC GCTTGGTAAC AGTTTGGAAG TGGTAGCATC TCGTAAAGTC 1080 1081 AAGCTAGTGG CAGATGTGCT TCTCAATGAG GCTGAAAAGA ATTCATACGA TCTGATTGTG 1140 1141 TTGCCTGGTG GTCTCGGTGG TGCTGAAGCA TTTGCAAGTT CGGAGAAGCT AGTGAATATG 1200 1201 TTAAAGAAGC AGGCGGAATC AAACAAACCA TATGGAGCTG TTTGTGCATC TCCTGCTCTG 1260 1261 GTCTTCGAGC CACACGGTTT ACTCAAGGGT AAGAAGGCGA CAGCTTATCC ACCAATGTGC 1320 1321 AACAAATTGT CGGACCAGAG TCACATCGAG CATAGAGTAT TGGTGGACGG TAATCTCATA 1380 1381 ACGAGCAGGG GCCCTGGAAC ATCGTTGGAG TGTGCACTCG CAATCGTGGA GAAGTTTTAT 1440 1441 GGTCGCGAGA AAGGACTTCA GCTCTCAAAG GCAACTCTTG TGTAA 1485 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Bro-1846 | Brassica oleracea | 97.7 | 0.0 | 783 |
| LLPS-Brr-1612 | Brassica rapa | 96.16 | 0.0 | 772 |
| LLPS-Art-2708 | Arabidopsis thaliana | 92.53 | 0.0 | 785 |
| LLPS-Arl-0739 | Arabidopsis lyrata | 91.73 | 0.0 | 769 |
| LLPS-Gor-1299 | Gossypium raimondii | 72.5 | 0.0 | 599 |
| LLPS-Vir-1020 | Vigna radiata | 71.92 | 2e-96 | 304 |
| LLPS-Prp-1588 | Prunus persica | 71.5 | 0.0 | 574 |
| LLPS-Mae-1292 | Manihot esculenta | 70.86 | 0.0 | 594 |
| LLPS-Thc-0880 | Theobroma cacao | 70.39 | 0.0 | 624 |
| LLPS-Viv-0894 | Vitis vinifera | 70.32 | 0.0 | 578 |
| LLPS-Coc-0443 | Corchorus capsularis | 68.93 | 0.0 | 604 |
| LLPS-Mua-2002 | Musa acuminata | 68.46 | 2e-176 | 508 |
| LLPS-Hea-1619 | Helianthus annuus | 68.06 | 0.0 | 577 |
| LLPS-Sot-0815 | Solanum tuberosum | 67.78 | 0.0 | 525 |
| LLPS-Cus-0631 | Cucumis sativus | 67.77 | 0.0 | 586 |
| LLPS-Nia-1521 | Nicotiana attenuata | 67.24 | 0.0 | 542 |
| LLPS-Glm-0851 | Glycine max | 67.18 | 0.0 | 526 |
| LLPS-Dac-0418 | Daucus carota | 67.01 | 0.0 | 552 |
| LLPS-Phv-2076 | Phaseolus vulgaris | 66.83 | 0.0 | 530 |
| LLPS-Sob-2442 | Sorghum bicolor | 66.41 | 7e-158 | 463 |
| LLPS-Met-1729 | Medicago truncatula | 66.24 | 0.0 | 530 |
| LLPS-Via-0144 | Vigna angularis | 65.08 | 3e-178 | 515 |
| LLPS-Orp-0065 | Oryza punctata | 64.96 | 3e-148 | 436 |
| LLPS-Pot-2215 | Populus trichocarpa | 64.64 | 1e-175 | 506 |
| LLPS-Amt-1708 | Amborella trichopoda | 64.27 | 2e-180 | 520 |
| LLPS-Tru-0232 | Triticum urartu | 64.17 | 1e-154 | 452 |
| LLPS-Hov-1113 | Hordeum vulgare | 63.91 | 1e-156 | 460 |
| LLPS-Orb-0852 | Oryza barthii | 63.54 | 7e-153 | 449 |
| LLPS-Zem-1270 | Zea mays | 62.11 | 3e-164 | 479 |
| LLPS-Tra-1670 | Triticum aestivum | 61.07 | 1e-164 | 480 |
| LLPS-Sol-0487 | Solanum lycopersicum | 60.41 | 7e-166 | 485 |
| LLPS-Brd-1453 | Brachypodium distachyon | 57.43 | 2e-157 | 461 |
| LLPS-Org-0990 | Oryza glaberrima | 57.03 | 4e-153 | 451 |
| LLPS-Ors-1656 | Oryza sativa | 57.03 | 4e-153 | 451 |
| LLPS-Orgl-1078 | Oryza glumaepatula | 57.03 | 4e-153 | 451 |
| LLPS-Orm-1350 | Oryza meridionalis | 56.74 | 7e-154 | 452 |
| LLPS-Orr-1316 | Oryza rufipogon | 55.47 | 2e-147 | 441 |
| LLPS-Orni-0934 | Oryza nivara | 55.47 | 5e-149 | 441 |
| LLPS-Orbr-1344 | Oryza brachyantha | 54.96 | 4e-142 | 421 |
| LLPS-Sem-0988 | Selaginella moellendorffii | 53.49 | 2e-127 | 383 |
| LLPS-Chr-0882 | Chlamydomonas reinhardtii | 52.07 | 2e-51 | 179 |
| LLPS-Sei-0467 | Setaria italica | 51.9 | 2e-131 | 399 |
| LLPS-Gas-0705 | Galdieria sulphuraria | 50.0 | 1e-44 | 161 |
| LLPS-Php-1249 | Physcomitrella patens | 50.0 | 2e-130 | 392 |
| LLPS-Lep-0334 | Leersia perrieri | 47.63 | 9e-116 | 354 |
| LLPS-Cym-0104 | Cyanidioschyzon merolae | 47.12 | 4e-43 | 160 |
| LLPS-Cis-1998 | Ciona savignyi | 45.24 | 4e-37 | 140 |
| LLPS-Cii-2191 | Ciona intestinalis | 43.93 | 3e-37 | 140 |
| LLPS-Icp-2119 | Ictalurus punctatus | 43.41 | 7e-29 | 117 |
| LLPS-Cap-2252 | Cavia porcellus | 42.86 | 1e-28 | 116 |
| LLPS-Gaga-0842 | Gallus gallus | 42.86 | 8e-30 | 119 |
| LLPS-Anp-0277 | Anas platyrhynchos | 42.86 | 6e-30 | 120 |
| LLPS-Meg-1163 | Meleagris gallopavo | 42.86 | 8e-30 | 119 |
| LLPS-Pof-0769 | Poecilia formosa | 42.86 | 1e-29 | 119 |
| LLPS-Orc-1000 | Oryctolagus cuniculus | 42.86 | 1e-28 | 116 |
| LLPS-Sus-3048 | Sus scrofa | 42.86 | 4e-29 | 117 |
| LLPS-Fud-1453 | Fukomys damarensis | 42.61 | 8e-29 | 117 |
| LLPS-Fia-1388 | Ficedula albicollis | 42.37 | 1e-29 | 119 |
| LLPS-Mam-2933 | Macaca mulatta | 42.31 | 2e-28 | 115 |
| LLPS-Tag-0798 | Taeniopygia guttata | 42.31 | 1e-29 | 119 |
| LLPS-Nol-3352 | Nomascus leucogenys | 42.31 | 3e-28 | 115 |
| LLPS-Anc-2649 | Anolis carolinensis | 42.31 | 1e-28 | 116 |
| LLPS-Ict-1766 | Ictidomys tridecemlineatus | 42.31 | 4e-28 | 115 |
| LLPS-Loa-4337 | Loxodonta africana | 42.31 | 2e-28 | 115 |
| LLPS-Man-3345 | Macaca nemestrina | 42.31 | 3e-28 | 115 |
| LLPS-Fec-3445 | Felis catus | 42.31 | 2e-28 | 115 |
| LLPS-Hos-2024 | Homo sapiens | 42.31 | 3e-28 | 115 |
| LLPS-Dar-1256 | Danio rerio | 42.31 | 1e-29 | 119 |
| LLPS-Otg-0690 | Otolemur garnettii | 42.31 | 1e-28 | 116 |
| LLPS-Bot-1300 | Bos taurus | 42.31 | 5e-28 | 114 |
| LLPS-Gaa-2918 | Gasterosteus aculeatus | 42.31 | 3e-29 | 118 |
| LLPS-Ova-1207 | Ovis aries | 42.31 | 7e-28 | 114 |
| LLPS-Myl-2853 | Myotis lucifugus | 42.31 | 1e-27 | 114 |
| LLPS-Mup-0966 | Mustela putorius furo | 42.31 | 7e-29 | 117 |
| LLPS-Paa-4668 | Papio anubis | 42.31 | 3e-28 | 115 |
| LLPS-Mal-0669 | Mandrillus leucophaeus | 42.31 | 3e-28 | 115 |
| LLPS-Leo-1027 | Lepisosteus oculatus | 42.31 | 3e-29 | 118 |
| LLPS-Aon-2602 | Aotus nancymaae | 42.31 | 2e-28 | 115 |
| LLPS-Maf-1715 | Macaca fascicularis | 42.31 | 3e-28 | 115 |
| LLPS-Caj-1616 | Callithrix jacchus | 42.31 | 1e-28 | 116 |
| LLPS-Asm-1186 | Astyanax mexicanus | 42.31 | 4e-29 | 117 |
| LLPS-Drm-1514 | Drosophila melanogaster | 42.22 | 1e-34 | 133 |
| LLPS-Eqc-2287 | Equus caballus | 42.11 | 3e-28 | 117 |
| LLPS-Ora-1563 | Ornithorhynchus anatinus | 42.11 | 4e-28 | 115 |
| LLPS-Caf-3134 | Canis familiaris | 41.76 | 7e-28 | 114 |
| LLPS-Poa-2982 | Pongo abelii | 41.76 | 3e-28 | 115 |
| LLPS-Cas-1940 | Carlito syrichta | 41.76 | 3e-27 | 112 |
| LLPS-Mod-1678 | Monodelphis domestica | 41.76 | 2e-27 | 113 |
| LLPS-Pap-1788 | Pan paniscus | 41.76 | 4e-28 | 115 |
| LLPS-Urm-2000 | Ursus maritimus | 41.76 | 7e-28 | 114 |
| LLPS-Pat-0176 | Pan troglodytes | 41.76 | 4e-28 | 115 |
| LLPS-Orn-1738 | Oreochromis niloticus | 41.76 | 6e-29 | 117 |
| LLPS-Tut-1235 | Tursiops truncatus | 41.76 | 1e-28 | 116 |
| LLPS-Tar-3773 | Takifugu rubripes | 41.76 | 2e-29 | 119 |
| LLPS-Xim-0846 | Xiphophorus maculatus | 41.76 | 3e-28 | 115 |
| LLPS-Aim-4151 | Ailuropoda melanoleuca | 41.76 | 3e-28 | 115 |
| LLPS-Orl-3518 | Oryzias latipes | 41.76 | 7e-29 | 117 |
| LLPS-Chs-2503 | Chlorocebus sabaeus | 41.76 | 4e-28 | 115 |
| LLPS-Mum-0097 | Mus musculus | 41.76 | 2e-27 | 113 |
| LLPS-Osl-0791 | Ostreococcus lucimarinus | 41.71 | 2e-32 | 129 |
| LLPS-Lac-3095 | Latimeria chalumnae | 41.48 | 2e-30 | 122 |
| LLPS-Xet-1899 | Xenopus tropicalis | 41.21 | 4e-29 | 117 |
| LLPS-Scf-0575 | Scleropages formosus | 41.21 | 2e-30 | 121 |
| LLPS-Dio-1417 | Dipodomys ordii | 41.18 | 1e-28 | 116 |
| LLPS-Rhb-2865 | Rhinopithecus bieti | 40.38 | 2e-19 | 90.9 |
| LLPS-Scm-0940 | Scophthalmus maximus | 40.34 | 1e-28 | 116 |
| LLPS-Ten-2421 | Tetraodon nigroviridis | 39.77 | 6e-28 | 114 |
| LLPS-Pes-1728 | Pelodiscus sinensis | 39.56 | 2e-27 | 113 |
| LLPS-Tum-1374 | Tuber melanosporum | 39.55 | 3e-16 | 81.3 |
| LLPS-Chc-1191 | Chondrus crispus | 38.95 | 7e-35 | 135 |
| LLPS-Cae-0844 | Caenorhabditis elegans | 38.86 | 2e-27 | 113 |
| LLPS-Sah-2326 | Sarcophilus harrisii | 38.74 | 5e-25 | 106 |
| LLPS-Ori-1447 | Oryza indica | 38.55 | 4e-30 | 120 |
| LLPS-Cea-3367 | Cercocebus atys | 38.55 | 3e-21 | 96.3 |
| LLPS-Mea-2721 | Mesocricetus auratus | 38.46 | 3e-22 | 99.0 |
| LLPS-Lem-0640 | Leptosphaeria maculans | 37.81 | 8e-25 | 106 |
| LLPS-Phn-0001 | Phaeosphaeria nodorum | 37.57 | 5e-21 | 96.3 |
| LLPS-Ere-0441 | Erinaceus europaeus | 37.5 | 7e-07 | 52.8 |
| LLPS-Ran-2931 | Rattus norvegicus | 37.12 | 6e-14 | 75.1 |
| LLPS-Abg-0898 | Absidia glauca | 36.61 | 3e-28 | 115 |
| LLPS-Gog-0979 | Gorilla gorilla | 36.02 | 5e-24 | 102 |
| LLPS-Pytr-1580 | Pyrenophora triticirepentis | 35.52 | 1e-22 | 100 |
| LLPS-Pyt-0275 | Pyrenophora teres | 34.97 | 1e-21 | 97.1 |
| LLPS-Spr-0247 | Sporisorium reilianum | 34.78 | 5e-19 | 90.1 |
| LLPS-Miv-0806 | Microbotryum violaceum | 34.25 | 4e-23 | 105 |
| LLPS-Scc-1339 | Schizosaccharomyces cryophilus | 33.52 | 3e-13 | 73.2 |
| LLPS-Usm-0963 | Ustilago maydis | 32.32 | 4e-18 | 87.4 |
| LLPS-Scj-1427 | Schizosaccharomyces japonicus | 27.75 | 1e-10 | 65.1 |
| LLPS-Scp-0480 | Schizosaccharomyces pombe | 27.46 | 4e-08 | 57.4 |