DrLLPS - Data resource of LLPS

LLPS-Brn-2534
BnaC09g30950D

Integrated Annotations

▼ OVERVIEW


Status:	Unreviewed
Protein Name:	Histone H2A
Gene Name:	BnaC09g30950D, GSBRNA2T00002940001
Ensembl Gene:	GSBRNA2T00002940001
Ensembl Protein:	CDY18345
Organism:	Brassica napus
Taxa ID:	3708
LLPS Type:	Others

▼ PROPERTY

——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:

Condensate	Evidence	Orthologs
Nucleolus	Predicted from orthologs	(View)

Organism	DrLLPS ID	UniProt ID	LLPS type	Condensate	Identity	E-value	Score
Arabidopsis thaliana	LLPS-Art-1877	Q9LD28	Client	Nucleolus	97.69	5e-70	213

▼ CROSS REFERENCE

Database	Nucleotide ID	Protein ID
Ensembl	CDY18345	CDY18345
UniProt		A0A078FV69, A0A078FV69_BRANA
GeneBank	LK032084	CDY18345.1
RefSeq	XM_013863963.1	XP_013719417.1

▼ SEQUENCE

Protein Sequence (FASTA)
1 MAGRGKTLGS GAAKKATSRS SKAGLQFPVG RIARFLKAGK YAERVGAGAP VYLAAVLEYL 60 61 AAEVLELAGN AARDNKKTRI VPRHIQLAVR NDEELSKLLG DVTIANGGVM PNIHNLLLPK 120 121 KSGPSKPQED 130
Nucleotide CDS Sequence (FASTA)
1 ATGGCAGGTC GCGGAAAAAC TCTCGGATCC GGTGCGGCGA AGAAAGCCAC GTCTCGTAGC 60 61 AGCAAGGCGG GGCTCCAATT CCCGGTGGGT CGTATCGCTC GATTCCTCAA AGCCGGTAAA 120 121 TACGCCGAAC GTGTCGGAGC TGGTGCTCCG GTTTATCTCG CCGCCGTCCT CGAGTATCTA 180 181 GCCGCCGAGG TACTTGAACT TGCTGGAAAC GCAGCAAGAG ACAACAAGAA GACACGTATC 240 241 GTCCCTCGTC ACATCCAGCT CGCCGTGAGA AACGATGAGG AGCTAAGCAA GCTTCTTGGA 300 301 GATGTGACTA TTGCTAATGG AGGAGTGATG CCCAATATCC ACAATCTCCT CCTCCCCAAG 360 361 AAGTCTGGTC CTTCAAAACC TCAGGAAGAT TAG 393

▼ ORTHOLOGY

DrLLPS ID	Organism	Identity	E-value	Score
LLPS-Brr-2443	Brassica rapa	99.23	3e-58	183
LLPS-Arl-1524	Arabidopsis lyrata	98.46	9e-58	182
LLPS-Cus-1237	Cucumis sativus	98.4	3e-53	171
LLPS-Art-1877	Arabidopsis thaliana	97.69	2e-57	181
LLPS-Gor-1989	Gossypium raimondii	97.62	3e-54	173
LLPS-Coc-0720	Corchorus capsularis	97.6	1e-53	171
LLPS-Pot-0358	Populus trichocarpa	97.6	2e-53	171
LLPS-Mae-2705	Manihot esculenta	97.6	1e-53	172
LLPS-Thc-1665	Theobroma cacao	97.6	9e-54	172
LLPS-Dac-0192	Daucus carota	96.92	6e-56	177
LLPS-Nia-2154	Nicotiana attenuata	96.18	3e-54	173
LLPS-Sot-1179	Solanum tuberosum	96.15	9e-56	177
LLPS-Sol-2070	Solanum lycopersicum	96.15	6e-56	177
LLPS-Hea-1773	Helianthus annuus	96.15	2e-56	178
LLPS-Bro-2078	Brassica oleracea	93.89	3e-52	168
LLPS-Met-1686	Medicago truncatula	93.85	1e-52	169
LLPS-Php-1531	Physcomitrella patens	92.93	7e-44	147
LLPS-Amt-2165	Amborella trichopoda	92.16	9e-46	152
LLPS-Zem-0226	Zea mays	91.92	9e-44	146
LLPS-Prp-0468	Prunus persica	91.67	1e-51	166
LLPS-Viv-0864	Vitis vinifera	91.18	3e-45	150
LLPS-Phv-1412	Phaseolus vulgaris	91.18	1e-44	149
LLPS-Via-0430	Vigna angularis	91.18	1e-44	149
LLPS-Vir-0707	Vigna radiata	91.18	1e-44	149
LLPS-Glm-0077	Glycine max	91.18	1e-44	149
LLPS-Brd-2233	Brachypodium distachyon	90.91	8e-44	146
LLPS-Sei-2469	Setaria italica	90.2	8e-44	146
LLPS-Mua-2110	Musa acuminata	90.2	1e-43	146
LLPS-Sob-1302	Sorghum bicolor	89.9	3e-42	142
LLPS-Lep-1554	Leersia perrieri	89.9	4e-43	144
LLPS-Orb-0263	Oryza barthii	89.47	5e-40	137
LLPS-Orbr-1631	Oryza brachyantha	89.22	1e-43	146
LLPS-Orr-0172	Oryza rufipogon	88.24	1e-42	144
LLPS-Orm-1208	Oryza meridionalis	88.24	1e-42	144
LLPS-Orp-1772	Oryza punctata	88.24	1e-42	144
LLPS-Ors-1069	Oryza sativa	88.24	1e-42	144
LLPS-Orgl-2406	Oryza glumaepatula	88.24	1e-42	144
LLPS-Ori-0035	Oryza indica	88.24	1e-42	144
LLPS-Sem-1151	Selaginella moellendorffii	88.24	7e-43	144
LLPS-Orni-1769	Oryza nivara	88.24	1e-42	144
LLPS-Hov-0350	Hordeum vulgare	85.29	2e-41	142
LLPS-Org-0892	Oryza glaberrima	84.62	7e-41	139
LLPS-Xet-1571	Xenopus tropicalis	80.58	2e-39	135
LLPS-Urm-1665	Ursus maritimus	79.41	8e-38	131
LLPS-Fia-3232	Ficedula albicollis	79.41	4e-38	131
LLPS-Chr-1538	Chlamydomonas reinhardtii	79.23	2e-42	143
LLPS-Scf-0728	Scleropages formosus	78.86	9e-39	133
LLPS-Sah-2184	Sarcophilus harrisii	78.86	6e-39	134
LLPS-Ten-0163	Tetraodon nigroviridis	78.69	4e-38	131
LLPS-Dar-0068	Danio rerio	78.69	4e-38	132
LLPS-Orn-2794	Oreochromis niloticus	78.69	4e-38	132
LLPS-Icp-2448	Ictalurus punctatus	78.69	4e-38	132
LLPS-Mod-3404	Monodelphis domestica	78.64	3e-38	132
LLPS-Cap-1736	Cavia porcellus	78.43	1e-37	130
LLPS-Rhb-3729	Rhinopithecus bieti	78.43	2e-37	130
LLPS-Ran-2555	Rattus norvegicus	78.43	2e-37	130
LLPS-Mum-1714	Mus musculus	78.43	2e-37	130
LLPS-Fud-0887	Fukomys damarensis	78.43	1e-37	130
LLPS-Gaga-1042	Gallus gallus	78.05	4e-38	132
LLPS-Lac-0439	Latimeria chalumnae	78.05	9e-39	134
LLPS-Anc-1172	Anolis carolinensis	77.88	2e-37	130
LLPS-Pof-1052	Poecilia formosa	77.87	5e-38	131
LLPS-Xim-3162	Xiphophorus maculatus	77.87	3e-38	132
LLPS-Tar-2738	Takifugu rubripes	77.87	4e-38	132
LLPS-Orl-3195	Oryzias latipes	77.87	4e-38	132
LLPS-Meg-0419	Meleagris gallopavo	77.6	3e-38	132
LLPS-Ora-0973	Ornithorhynchus anatinus	77.6	5e-39	134
LLPS-Scj-1417	Schizosaccharomyces japonicus	77.36	2e-39	135
LLPS-Leo-0717	Lepisosteus oculatus	77.17	6e-40	137
LLPS-Mam-2983	Macaca mulatta	76.92	1e-37	130
LLPS-Poa-1626	Pongo abelii	76.92	1e-37	130
LLPS-Caf-3568	Canis familiaris	76.92	1e-37	130
LLPS-Eqc-0142	Equus caballus	76.92	1e-37	130
LLPS-Tag-2508	Taeniopygia guttata	76.92	2e-37	130
LLPS-Cas-1079	Carlito syrichta	76.92	1e-37	130
LLPS-Man-3674	Macaca nemestrina	76.92	1e-37	130
LLPS-Anp-1959	Anas platyrhynchos	76.92	2e-37	130
LLPS-Loa-4276	Loxodonta africana	76.92	1e-37	130
LLPS-Hos-2895	Homo sapiens	76.92	1e-37	130
LLPS-Pat-0853	Pan troglodytes	76.92	1e-37	130
LLPS-Pap-1271	Pan paniscus	76.92	1e-37	130
LLPS-Fec-2473	Felis catus	76.92	1e-37	130
LLPS-Bot-4385	Bos taurus	76.92	1e-37	130
LLPS-Mal-3063	Mandrillus leucophaeus	76.92	1e-37	130
LLPS-Paa-0851	Papio anubis	76.92	1e-37	130
LLPS-Aim-1324	Ailuropoda melanoleuca	76.92	1e-37	130
LLPS-Ova-1303	Ovis aries	76.92	1e-37	130
LLPS-Sus-4190	Sus scrofa	76.92	1e-37	130
LLPS-Cea-3804	Cercocebus atys	76.92	1e-37	130
LLPS-Aon-4819	Aotus nancymaae	76.92	1e-37	130
LLPS-Maf-3497	Macaca fascicularis	76.92	1e-37	130
LLPS-Chs-3833	Chlorocebus sabaeus	76.92	1e-37	130
LLPS-Gog-2994	Gorilla gorilla	76.92	1e-37	130
LLPS-Chc-0730	Chondrus crispus	76.42	9e-41	138
LLPS-Myl-0550	Myotis lucifugus	76.42	3e-38	132
LLPS-Ict-0139	Ictidomys tridecemlineatus	76.38	3e-38	132
LLPS-Tut-1394	Tursiops truncatus	76.38	3e-38	132
LLPS-Mup-0116	Mustela putorius furo	76.38	3e-38	132
LLPS-Caj-0117	Callithrix jacchus	76.38	3e-38	132
LLPS-Scm-2472	Scophthalmus maximus	76.15	1e-41	140
LLPS-Ere-0348	Erinaceus europaeus	76.0	5e-38	132
LLPS-Nol-1726	Nomascus leucogenys	75.96	1e-37	130
LLPS-Otg-0605	Otolemur garnettii	75.96	1e-37	130
LLPS-Dio-3604	Dipodomys ordii	75.96	1e-37	130
LLPS-Gaa-3550	Gasterosteus aculeatus	75.59	1e-39	136
LLPS-Mea-2864	Mesocricetus auratus	74.81	3e-38	132

LLPS-Brn-2534BnaC09g30950D

Protein Sequence

Nucleotide Sequence

LLPS-Brn-2534
BnaC09g30950D