LLPS-Brn-2520
BnaA09g28460D
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | BnaA09g28460D protein |
Gene Name: | BnaA09g28460D, GSBRNA2T00074285001 |
Ensembl Gene: | GSBRNA2T00074285001 |
Ensembl Protein: | CDY42114 |
Organism: | Brassica napus |
Taxa ID: | 3708 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Stress granule, Others | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | CDY42114 | CDY42114 |
UniProt | A0A078HXQ7, A0A078HXQ7_BRANA | |
GeneBank | LK032515 | CDY42114.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MAPNVDESVK LFLSIGLDEK TAATTINNPK VTANLTAVIH EAGVTDGCDR TTGNLLYTVA 60 61 TKHHSNLLLH RPTLFDYIVS SKIKTPAQLD AAVSFFDNHA AEDFKLNEFE EACGVGVEVS 120 121 AEDIEKAAEK VFEENRSAIV EQRYRTNVGQ LLGHVRKSLP WADPKIVKDV IDRKMYELLG 180 181 ERTAADNEKP TKKKEKKEKP AAKAEEKKAA VEATPEPSEE ELNPYSIFPQ PEQNLMVHTE 240 241 VFYSDGSVLK CNNKKEVLDK HLKVTGGKVY TRFPPEPNGY LHIGHAKAMF VDFGLAKERG 300 301 GCCYLRYDDT NPEAEKKEYI NHIEEIVNWM GWEPFKITYT SDYFQELYDL AVELIRRGHA 360 361 YVDHQNAEEI KEYREKKMNS PWRDRPIEES LRLFDEMRRG MIEEGKATLR MKQDMQNDNC 420 421 NMYDLIAYRI KASETNIIFG CRRMYSPHSL DILFFTPHPH AGDKWCIYPS YDFAHCTVDS 480 481 LENITHSLCT LEFETRRASY YWLLHSLDLY MPYVWEYSRL NITNTVMSKR KLNYIVTNNH 540 541 VDGWDDPRLL TLAGLRRRGV TPTAINAFVR GMGITRSDGS MIHVSRLEHH IREELNKTAP 600 601 RTMVVLNPLK VVITNLESDK VMELDAKRWP DAQNDDPSAF YKVPFSRVVY IDQSDFRMKD 660 661 SKDYYGLAPG KSVLLRYGFP IKCTNVVFAD DNETIREIHA EYDPEKKTKP KGVLHWVAES 720 721 SPGKEPIKVE VRLFEKLFNS ENPAELNDDW LTDINPNSKV VVSDAYAVSI LKDAAVGDKF 780 781 QFERLGYFAV DKDSEPGKLV FNRTVTLRDS YGKGGK 816 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGCTCCCA ACGTCGATGA ATCTGTGAAG CTCTTCCTCA GCATCGGCCT CGACGAGAAA 60 61 ACCGCCGCCA CTACCATCAA CAACCCCAAG GTCACCGCTA ATCTCACCGC CGTTATCCAC 120 121 GAGGCTGGTG TCACTGACGG ATGCGATCGA ACTACTGGAA ACCTGTTGTA CACTGTCGCT 180 181 ACTAAGCACC ATTCAAATCT TCTTCTGCAT CGTCCTACAT TGTTCGATTA CATTGTTTCC 240 241 TCCAAGATTA AAACTCCAGC ACAATTGGAT GCTGCAGTTT CGTTTTTTGA CAATCACGCT 300 301 GCTGAGGACT TCAAGCTAAA TGAATTTGAG GAGGCATGTG GTGTTGGGGT TGAAGTTTCT 360 361 GCAGAAGATA TTGAGAAAGC AGCTGAAAAA GTTTTTGAAG AGAATAGGAG TGCAATAGTG 420 421 GAGCAGCGCT ACCGAACTAA TGTGGGTCAA TTGCTTGGAC ATGTCCGGAA AAGTTTGCCA 480 481 TGGGCAGATC CTAAGATTGT AAAGGACGTC ATAGACAGAA AAATGTATGA ACTGCTTGGT 540 541 GAGAGAACTG CTGCGGACAA TGAAAAACCT ACAAAAAAGA AGGAAAAGAA GGAGAAACCT 600 601 GCTGCCAAAG CTGAGGAAAA GAAAGCTGCT GTAGAAGCTA CCCCAGAGCC ATCAGAAGAG 660 661 GAGCTTAATC CATATTCTAT ATTCCCTCAG CCAGAGCAAA ATTTGATGGT TCACACAGAA 720 721 GTCTTTTATA GCGATGGCTC TGTGCTCAAA TGTAACAATA AGAAGGAAGT GCTTGATAAA 780 781 CATCTCAAGG TGACTGGAGG GAAGGTCTAT ACCAGGTTCC CACCTGAACC AAATGGATAT 840 841 CTACATATTG GACATGCAAA GGCTATGTTT GTCGATTTTG GTCTTGCAAA GGAGCGAGGA 900 901 GGTTGCTGTT ATCTAAGATA TGATGATACT AATCCCGAAG CAGAAAAGAA AGAGTACATT 960 961 AACCACATTG AAGAAATTGT TAACTGGATG GGTTGGGAAC CCTTCAAGAT TACGTACACC 1020 1021 AGTGATTATT TCCAAGAATT GTATGATTTG GCAGTCGAAT TGATTCGGAG AGGTCATGCT 1080 1081 TATGTTGATC ATCAGAATGC TGAAGAGATA AAAGAGTACA GAGAGAAGAA AATGAATAGC 1140 1141 CCCTGGAGGG ACAGGCCGAT TGAAGAATCT CTTAGACTTT TTGACGAAAT GAGACGAGGA 1200 1201 ATGATTGAGG AAGGGAAAGC AACACTGCGA ATGAAGCAGG ATATGCAGAA TGATAATTGC 1260 1261 AATATGTATG ACCTTATTGC CTACCGTATA AAGGCAAGTG AAACAAACAT TATCTTTGGT 1320 1321 TGCAGAAGAA TGTATTCTCC CCATTCTTTG GATATCTTAT TTTTCACACC TCATCCTCAT 1380 1381 GCTGGTGACA AATGGTGCAT CTATCCGAGC TATGATTTTG CCCACTGCAC TGTTGACTCT 1440 1441 CTCGAGAATA TAACACATTC GCTCTGTACT CTTGAATTCG AAACCCGACG GGCGTCATAT 1500 1501 TACTGGCTTT TACATTCCCT GGACCTCTAC ATGCCGTATG TGTGGGAATA TTCACGGCTG 1560 1561 AATATCACAA ACACTGTAAT GTCCAAGCGT AAGTTGAATT ACATTGTGAC AAACAATCAT 1620 1621 GTTGATGGTT GGGATGATCC ACGTCTTTTG ACACTTGCTG GTCTGAGACG AAGGGGTGTG 1680 1681 ACTCCTACTG CGATCAATGC TTTTGTACGA GGAATGGGAA TTACCAGAAG TGATGGTAGC 1740 1741 ATGATACATG TGAGTCGTCT TGAGCATCAT ATCAGAGAAG AGTTGAATAA AACGGCTCCC 1800 1801 CGCACTATGG TGGTGCTTAA TCCTCTGAAG GTGGTCATCA CTAATTTGGA ATCAGACAAG 1860 1861 GTTATGGAGC TTGATGCCAA AAGGTGGCCT GATGCTCAGA ACGATGACCC CTCTGCATTC 1920 1921 TACAAGGTTC CATTCTCTAG AGTTGTGTAC ATTGATCAAT CTGACTTCCG AATGAAGGAT 1980 1981 TCAAAAGATT ACTATGGGCT CGCCCCTGGT AAATCAGTTT TGCTAAGATA TGGTTTCCCA 2040 2041 ATCAAGTGCA CCAACGTTGT CTTTGCTGAT GACAATGAAA CCATTCGTGA GATCCATGCA 2100 2101 GAGTATGACC CTGAGAAAAA GACAAAGCCA AAGGGTGTTC TACACTGGGT TGCTGAATCT 2160 2161 TCTCCAGGAA AGGAGCCTAT AAAGGTTGAA GTCCGGTTAT TTGAGAAACT CTTTAACTCC 2220 2221 GAGAACCCGG CTGAACTCAA TGATGATTGG CTTACTGACA TCAACCCAAA CTCCAAAGTG 2280 2281 GTGGTTTCTG ATGCCTACGC TGTGTCAATC CTTAAAGATG CTGCCGTCGG GGACAAGTTC 2340 2341 CAGTTCGAGA GGCTAGGTTA TTTTGCGGTG GACAAGGACT CTGAGCCTGG AAAGCTTGTG 2400 2401 TTCAACAGGA CGGTCACACT CAGAGACAGT TATGGGAAAG GTGGGAAGTA A 2451 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Brr-1647 | Brassica rapa | 100.0 | 0.0 | 731 |
LLPS-Bro-0348 | Brassica oleracea | 95.86 | 0.0 | 1529 |
LLPS-Arl-1311 | Arabidopsis lyrata | 85.24 | 0.0 | 1389 |
LLPS-Art-2835 | Arabidopsis thaliana | 83.74 | 0.0 | 1360 |
LLPS-Thc-2350 | Theobroma cacao | 76.23 | 0.0 | 1245 |
LLPS-Gor-1891 | Gossypium raimondii | 75.34 | 0.0 | 1232 |
LLPS-Mae-2470 | Manihot esculenta | 75.25 | 0.0 | 1236 |
LLPS-Pot-2075 | Populus trichocarpa | 75.25 | 0.0 | 1224 |
LLPS-Coc-2001 | Corchorus capsularis | 75.09 | 0.0 | 1228 |
LLPS-Prp-2418 | Prunus persica | 74.85 | 0.0 | 1224 |
LLPS-Viv-1467 | Vitis vinifera | 74.75 | 0.0 | 1222 |
LLPS-Sol-0642 | Solanum lycopersicum | 74.57 | 0.0 | 1208 |
LLPS-Sot-1649 | Solanum tuberosum | 74.57 | 0.0 | 1204 |
LLPS-Nia-1616 | Nicotiana attenuata | 73.95 | 0.0 | 1193 |
LLPS-Hea-2066 | Helianthus annuus | 73.58 | 0.0 | 1186 |
LLPS-Cus-1595 | Cucumis sativus | 73.45 | 0.0 | 1187 |
LLPS-Met-1249 | Medicago truncatula | 72.63 | 0.0 | 1186 |
LLPS-Dac-1872 | Daucus carota | 71.81 | 0.0 | 1173 |
LLPS-Glm-0479 | Glycine max | 71.76 | 0.0 | 1176 |
LLPS-Phv-0934 | Phaseolus vulgaris | 71.64 | 0.0 | 1177 |
LLPS-Vir-2203 | Vigna radiata | 70.9 | 0.0 | 1164 |
LLPS-Via-1850 | Vigna angularis | 70.53 | 0.0 | 1154 |
LLPS-Mua-1876 | Musa acuminata | 70.18 | 0.0 | 1128 |
LLPS-Orp-1343 | Oryza punctata | 69.8 | 0.0 | 1107 |
LLPS-Orbr-1886 | Oryza brachyantha | 69.65 | 0.0 | 1118 |
LLPS-Tru-0542 | Triticum urartu | 69.55 | 0.0 | 1073 |
LLPS-Orni-1806 | Oryza nivara | 69.53 | 0.0 | 1109 |
LLPS-Orr-1498 | Oryza rufipogon | 69.4 | 0.0 | 1106 |
LLPS-Ori-2182 | Oryza indica | 69.28 | 0.0 | 1107 |
LLPS-Ors-0998 | Oryza sativa | 69.28 | 0.0 | 1107 |
LLPS-Org-2154 | Oryza glaberrima | 69.28 | 0.0 | 1107 |
LLPS-Orb-1716 | Oryza barthii | 69.15 | 0.0 | 1103 |
LLPS-Amt-0532 | Amborella trichopoda | 69.14 | 0.0 | 1135 |
LLPS-Zem-1451 | Zea mays | 68.8 | 0.0 | 1093 |
LLPS-Tra-2581 | Triticum aestivum | 68.75 | 0.0 | 1096 |
LLPS-Hov-0501 | Hordeum vulgare | 68.09 | 0.0 | 1046 |
LLPS-Sei-1421 | Setaria italica | 67.57 | 0.0 | 1087 |
LLPS-Lep-1504 | Leersia perrieri | 67.41 | 0.0 | 1057 |
LLPS-Brd-2115 | Brachypodium distachyon | 67.2 | 0.0 | 1070 |
LLPS-Orgl-2326 | Oryza glumaepatula | 67.16 | 0.0 | 1060 |
LLPS-Orm-1105 | Oryza meridionalis | 67.16 | 0.0 | 1059 |
LLPS-Sob-2297 | Sorghum bicolor | 66.79 | 0.0 | 1066 |
LLPS-Php-0467 | Physcomitrella patens | 64.22 | 0.0 | 1019 |
LLPS-Sem-1510 | Selaginella moellendorffii | 60.74 | 0.0 | 947 |
LLPS-Chr-1594 | Chlamydomonas reinhardtii | 54.22 | 0.0 | 833 |
LLPS-Chc-0673 | Chondrus crispus | 51.15 | 2e-170 | 509 |
LLPS-Spr-1184 | Sporisorium reilianum | 49.9 | 6e-153 | 476 |
LLPS-Osl-0698 | Ostreococcus lucimarinus | 48.15 | 2e-159 | 482 |
LLPS-Gas-0740 | Galdieria sulphuraria | 45.23 | 0.0 | 646 |
LLPS-Beb-1523 | Beauveria bassiana | 45.18 | 5e-135 | 422 |
LLPS-Ten-1201 | Tetraodon nigroviridis | 45.07 | 9e-81 | 280 |
LLPS-Miv-1192 | Microbotryum violaceum | 44.98 | 7e-139 | 439 |
LLPS-Asc-1113 | Aspergillus clavatus | 44.86 | 9e-142 | 441 |
LLPS-Dar-0288 | Danio rerio | 44.8 | 0.0 | 627 |
LLPS-Asm-2254 | Astyanax mexicanus | 44.51 | 0.0 | 610 |
LLPS-Cis-0817 | Ciona savignyi | 44.39 | 4e-144 | 451 |
LLPS-Meg-3082 | Meleagris gallopavo | 44.38 | 3e-174 | 525 |
LLPS-Mao-1498 | Magnaporthe oryzae | 44.35 | 1e-135 | 424 |
LLPS-Cogr-1142 | Colletotrichum graminicola | 44.23 | 7e-132 | 414 |
LLPS-Coo-1368 | Colletotrichum orbiculare | 44.19 | 2e-124 | 394 |
LLPS-Sah-3905 | Sarcophilus harrisii | 44.17 | 0.0 | 592 |
LLPS-Pof-0630 | Poecilia formosa | 44.15 | 0.0 | 605 |
LLPS-Map-0724 | Magnaporthe poae | 43.98 | 2e-136 | 426 |
LLPS-Scs-0712 | Sclerotinia sclerotiorum | 43.86 | 5e-128 | 403 |
LLPS-Gag-1583 | Gaeumannomyces graminis | 43.8 | 1e-134 | 421 |
LLPS-Fia-1482 | Ficedula albicollis | 43.77 | 0.0 | 612 |
LLPS-Asni-0636 | Aspergillus niger | 43.76 | 6e-134 | 419 |
LLPS-Ora-2101 | Ornithorhynchus anatinus | 43.7 | 9e-165 | 499 |
LLPS-Icp-3452 | Ictalurus punctatus | 43.55 | 0.0 | 600 |
LLPS-Anc-4058 | Anolis carolinensis | 43.54 | 0.0 | 607 |
LLPS-Blg-0504 | Blumeria graminis | 43.51 | 9e-127 | 400 |
LLPS-Scf-2975 | Scleropages formosus | 43.5 | 0.0 | 600 |
LLPS-Xim-4067 | Xiphophorus maculatus | 43.48 | 0.0 | 607 |
LLPS-Orn-3803 | Oreochromis niloticus | 43.48 | 0.0 | 611 |
LLPS-Tar-2545 | Takifugu rubripes | 43.33 | 0.0 | 604 |
LLPS-Cog-1312 | Colletotrichum gloeosporioides | 43.3 | 6e-118 | 377 |
LLPS-Xet-2093 | Xenopus tropicalis | 43.21 | 0.0 | 593 |
LLPS-Nec-1061 | Neurospora crassa | 43.2 | 4e-141 | 439 |
LLPS-Aso-0361 | Aspergillus oryzae | 43.18 | 5e-129 | 406 |
LLPS-Trr-1219 | Trichoderma reesei | 43.18 | 3e-125 | 397 |
LLPS-Scm-2829 | Scophthalmus maximus | 43.12 | 0.0 | 605 |
LLPS-Abg-1783 | Absidia glauca | 43.11 | 0.0 | 580 |
LLPS-Asf-1437 | Aspergillus flavus | 43.01 | 5e-128 | 404 |
LLPS-Orl-3721 | Oryzias latipes | 42.98 | 0.0 | 613 |
LLPS-Ved-1477 | Verticillium dahliae | 42.73 | 8e-128 | 404 |
LLPS-Lac-1591 | Latimeria chalumnae | 42.63 | 0.0 | 561 |
LLPS-Drm-0718 | Drosophila melanogaster | 42.49 | 0.0 | 571 |
LLPS-Nef-1201 | Neosartorya fischeri | 42.46 | 5e-139 | 434 |
LLPS-Gaa-3317 | Gasterosteus aculeatus | 42.39 | 0.0 | 593 |
LLPS-Fus-1175 | Fusarium solani | 42.36 | 2e-124 | 395 |
LLPS-Asfu-0051 | Aspergillus fumigatus | 42.28 | 2e-137 | 430 |
LLPS-Cap-2826 | Cavia porcellus | 42.14 | 0.0 | 587 |
LLPS-Zyt-0656 | Zymoseptoria tritici | 42.11 | 4e-120 | 383 |
LLPS-Trv-1307 | Trichoderma virens | 42.08 | 4e-120 | 384 |
LLPS-Mod-4337 | Monodelphis domestica | 42.05 | 0.0 | 581 |
LLPS-Asn-0465 | Aspergillus nidulans | 42.03 | 5e-127 | 401 |
LLPS-Pat-1981 | Pan troglodytes | 41.97 | 0.0 | 570 |
LLPS-Mup-0640 | Mustela putorius furo | 41.95 | 0.0 | 586 |
LLPS-Ast-0533 | Aspergillus terreus | 41.77 | 5e-124 | 394 |
LLPS-Mea-0577 | Mesocricetus auratus | 41.71 | 0.0 | 580 |
LLPS-Ova-3768 | Ovis aries | 41.71 | 0.0 | 579 |
LLPS-Aim-2425 | Ailuropoda melanoleuca | 41.71 | 0.0 | 582 |
LLPS-Bot-1494 | Bos taurus | 41.71 | 0.0 | 578 |
LLPS-Hos-3250 | Homo sapiens | 41.71 | 0.0 | 572 |
LLPS-Poa-3594 | Pongo abelii | 41.71 | 0.0 | 573 |
LLPS-Fec-2460 | Felis catus | 41.68 | 0.0 | 580 |
LLPS-Fud-0519 | Fukomys damarensis | 41.64 | 0.0 | 575 |
LLPS-Ict-4075 | Ictidomys tridecemlineatus | 41.64 | 0.0 | 581 |
LLPS-Ran-1790 | Rattus norvegicus | 41.59 | 0.0 | 580 |
LLPS-Caf-2982 | Canis familiaris | 41.59 | 0.0 | 583 |
LLPS-Nol-4282 | Nomascus leucogenys | 41.48 | 2e-74 | 261 |
LLPS-Gog-3010 | Gorilla gorilla | 41.46 | 0.0 | 573 |
LLPS-Aon-3590 | Aotus nancymaae | 41.46 | 0.0 | 576 |
LLPS-Sus-0723 | Sus scrofa | 41.46 | 0.0 | 572 |
LLPS-Chs-4174 | Chlorocebus sabaeus | 41.44 | 0.0 | 572 |
LLPS-Orc-0753 | Oryctolagus cuniculus | 41.43 | 0.0 | 575 |
LLPS-Cas-0564 | Carlito syrichta | 41.34 | 0.0 | 572 |
LLPS-Mal-3862 | Mandrillus leucophaeus | 41.32 | 0.0 | 572 |
LLPS-Rhb-4375 | Rhinopithecus bieti | 41.32 | 0.0 | 570 |
LLPS-Loa-2347 | Loxodonta africana | 41.27 | 0.0 | 576 |
LLPS-Myl-1849 | Myotis lucifugus | 41.22 | 0.0 | 574 |
LLPS-Tut-2422 | Tursiops truncatus | 41.22 | 0.0 | 572 |
LLPS-Maf-3535 | Macaca fascicularis | 41.2 | 0.0 | 569 |
LLPS-Cea-2088 | Cercocebus atys | 41.2 | 0.0 | 569 |
LLPS-Paa-2901 | Papio anubis | 41.2 | 0.0 | 570 |
LLPS-Man-4841 | Macaca nemestrina | 41.2 | 0.0 | 569 |
LLPS-Mam-2305 | Macaca mulatta | 41.2 | 0.0 | 569 |
LLPS-Caj-0694 | Callithrix jacchus | 41.1 | 0.0 | 574 |
LLPS-Mum-4422 | Mus musculus | 40.95 | 0.0 | 566 |
LLPS-Cii-2374 | Ciona intestinalis | 40.69 | 0.0 | 567 |
LLPS-Gaga-2104 | Gallus gallus | 40.69 | 4e-171 | 524 |
LLPS-Otg-1852 | Otolemur garnettii | 40.55 | 3e-111 | 362 |
LLPS-Scp-1168 | Schizosaccharomyces pombe | 40.5 | 6e-170 | 519 |
LLPS-Eqc-3678 | Equus caballus | 40.45 | 0.0 | 548 |
LLPS-Cae-1354 | Caenorhabditis elegans | 40.02 | 0.0 | 560 |
LLPS-Pytr-1561 | Pyrenophora triticirepentis | 39.9 | 2e-114 | 370 |
LLPS-Usm-0720 | Ustilago maydis | 39.77 | 1e-164 | 506 |
LLPS-Pyt-1561 | Pyrenophora teres | 39.71 | 5e-115 | 370 |
LLPS-Fuv-1347 | Fusarium verticillioides | 39.49 | 9e-125 | 395 |
LLPS-Lem-0589 | Leptosphaeria maculans | 39.48 | 2e-110 | 361 |
LLPS-Crn-0363 | Cryptococcus neoformans | 39.36 | 1e-142 | 449 |
LLPS-Urm-1631 | Ursus maritimus | 39.25 | 2e-160 | 493 |
LLPS-Scj-0643 | Schizosaccharomyces japonicus | 39.07 | 2e-149 | 464 |
LLPS-Scc-1281 | Schizosaccharomyces cryophilus | 38.74 | 5e-167 | 511 |
LLPS-Tum-0748 | Tuber melanosporum | 38.54 | 1e-164 | 504 |
LLPS-Yal-0911 | Yarrowia lipolytica | 38.4 | 2e-158 | 489 |
LLPS-Dos-0585 | Dothistroma septosporum | 38.2 | 7e-118 | 379 |
LLPS-Cym-0811 | Cyanidioschyzon merolae | 37.93 | 6e-176 | 538 |
LLPS-Asg-0755 | Ashbya gossypii | 37.68 | 6e-158 | 488 |
LLPS-Sac-0572 | Saccharomyces cerevisiae | 37.25 | 3e-155 | 481 |
LLPS-Fuo-0883 | Fusarium oxysporum | 36.82 | 2e-108 | 352 |
LLPS-Kop-0230 | Komagataella pastoris | 36.24 | 6e-156 | 482 |
LLPS-Mel-0711 | Melampsora laricipopulina | 35.54 | 1e-141 | 446 |
LLPS-Pug-1264 | Puccinia graminis | 35.35 | 5e-95 | 314 |
LLPS-Put-1180 | Puccinia triticina | 35.09 | 2e-130 | 417 |
LLPS-Pes-1253 | Pelodiscus sinensis | 32.67 | 2e-65 | 243 |
LLPS-Phn-0841 | Phaeosphaeria nodorum | 32.28 | 2e-58 | 222 |