LLPS-Brn-2414
BnaC08g14500D
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | BnaC08g14500D protein |
| Gene Name: | BnaC08g14500D, GSBRNA2T00012781001 |
| Ensembl Gene: | GSBRNA2T00012781001 |
| Ensembl Protein: | CDY20608 |
| Organism: | Brassica napus |
| Taxa ID: | 3708 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | CDY20608 | CDY20608 |
| UniProt | A0A078G7N1, A0A078G7N1_BRANA | |
| GeneBank | LK032110 | CDY20608.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MARKKIREYD SKRLVKEHFK RLSGKELPIR SVQHFDSFYI CSLILLSCSH KKKLHINQTT 60 61 DLNELVEKEP WLSSEKLVVK PDMLFGKRGK SGLVALKLDF AEVATFVEER LGKEVEMSGC 120 121 IGPITTFIVE PFIPHNEEFY LNVVSDRLGY SISFSECGGI EIEENWDKVK TIFLQTGASL 180 181 APEVCAPLVA TLPLEIKAEI EEFIKVIFTL FQDLDFTFLE MNPFTLVDGK PYPLDMRGEL 240 241 DDTAAFKNFK KWGDVEFPMP FGRVMSLTES FIHGLDEKTS ASLKFTVLNP KGRIWTMVAG 300 301 GGASVIYADT VGDLGYASEL GNYAEYSGAP KEDEVLQYAR VVIDCATANP DGKSRALVIG 360 361 GGIANFTDVA ATFNGIIRAL KEKESKLKAA RMHIYVRRRG PNYQKGLAKM RSLGDEIGVP 420 421 IEVYGPEATM TGICKEAIQY ITAAA 445 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGCTAGGA AGAAGATAAG AGAGTATGAC TCAAAGAGAC TGGTTAAGGA ACACTTCAAA 60 61 AGACTTTCTG GCAAAGAGCT TCCTATCAGA TCCGTTCAGC ACTTTGATTC TTTCTATATA 120 121 TGTAGTTTAA TATTACTTTC CTGTTCCCAT AAAAAAAAGC TTCATATAAA CCAAACAACT 180 181 GATCTGAATG AGCTAGTAGA GAAAGAACCT TGGCTCTCGT CCGAGAAGCT GGTTGTGAAA 240 241 CCTGACATGC TGTTTGGAAA GCGTGGCAAG AGTGGTCTGG TTGCCTTGAA ACTAGATTTT 300 301 GCTGAAGTTG CCACTTTTGT CGAAGAGCGT TTGGGCAAAG AGGTAGAGAT GAGTGGATGC 360 361 ATAGGACCCA TAACAACATT TATAGTCGAA CCATTCATCC CACACAATGA AGAGTTTTAT 420 421 CTTAACGTTG TCTCGGATCG CCTTGGTTAC AGCATCAGCT TTTCAGAGTG TGGAGGGATT 480 481 GAGATCGAGG AGAACTGGGA CAAGGTGAAG ACAATATTCT TACAAACGGG TGCTTCACTG 540 541 GCACCTGAAG TATGTGCACC TCTTGTGGCA ACTCTTCCAC TAGAGATCAA AGCAGAGATT 600 601 GAAGAGTTTA TCAAAGTCAT TTTCACCTTA TTCCAAGATC TTGATTTCAC TTTCTTGGAG 660 661 ATGAATCCTT TCACACTAGT TGATGGAAAG CCTTATCCTC TTGATATGAG GGGTGAGCTT 720 721 GATGATACTG CCGCCTTCAA GAACTTCAAG AAATGGGGAG ACGTTGAGTT TCCTATGCCA 780 781 TTTGGAAGAG TGATGAGTCT CACTGAAAGC TTCATCCATG GATTAGATGA GAAGACAAGT 840 841 GCGTCCTTGA AGTTTACTGT TCTGAATCCC AAGGGGAGGA TTTGGACAAT GGTAGCTGGA 900 901 GGAGGAGCAA GTGTCATCTA TGCAGATACT GTTGGAGATC TTGGTTACGC ATCTGAACTT 960 961 GGCAACTATG CTGAATACAG TGGAGCACCT AAAGAAGATG AGGTTTTGCA GTACGCTAGA 1020 1021 GTTGTTATTG ATTGTGCTAC AGCAAACCCT GATGGAAAGA GCAGAGCTCT TGTGATTGGA 1080 1081 GGTGGAATTG CCAACTTCAC TGATGTTGCT GCTACTTTCA ATGGTATAAT CCGTGCTCTC 1140 1141 AAAGAAAAGG AATCAAAGCT GAAAGCAGCA AGGATGCATA TATATGTGAG GAGACGAGGA 1200 1201 CCAAACTACC AAAAGGGACT TGCTAAGATG AGATCACTTG GAGATGAGAT CGGTGTCCCC 1260 1261 ATTGAGGTCT ATGGTCCAGA AGCAACCATG ACAGGTATCT GCAAGGAAGC AATCCAGTAC 1320 1321 ATCACAGCTG CAGCATAA 1338 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Brr-1205 | Brassica rapa | 92.13 | 0.0 | 770 |
| LLPS-Art-1842 | Arabidopsis thaliana | 91.69 | 0.0 | 774 |
| LLPS-Arl-0977 | Arabidopsis lyrata | 90.56 | 0.0 | 766 |
| LLPS-Vir-0333 | Vigna radiata | 79.74 | 0.0 | 700 |
| LLPS-Orm-2072 | Oryza meridionalis | 75.11 | 0.0 | 647 |
| LLPS-Ora-2658 | Ornithorhynchus anatinus | 52.91 | 3e-47 | 178 |
| LLPS-Cis-1245 | Ciona savignyi | 46.11 | 5e-99 | 326 |
| LLPS-Drm-1083 | Drosophila melanogaster | 45.55 | 6e-95 | 315 |
| LLPS-Pof-3697 | Poecilia formosa | 44.53 | 3e-91 | 305 |
| LLPS-Xim-1299 | Xiphophorus maculatus | 44.13 | 2e-91 | 305 |
| LLPS-Scm-3190 | Scophthalmus maximus | 43.99 | 3e-90 | 302 |
| LLPS-Orl-2861 | Oryzias latipes | 43.81 | 9e-89 | 298 |
| LLPS-Orn-2076 | Oreochromis niloticus | 43.3 | 1e-87 | 295 |
| LLPS-Aim-2499 | Ailuropoda melanoleuca | 43.24 | 2e-90 | 302 |
| LLPS-Ova-4112 | Ovis aries | 43.24 | 2e-90 | 303 |
| LLPS-Caf-3902 | Canis familiaris | 43.24 | 4e-90 | 302 |
| LLPS-Eqc-0819 | Equus caballus | 43.24 | 2e-90 | 303 |
| LLPS-Ict-3527 | Ictidomys tridecemlineatus | 43.24 | 6e-90 | 301 |
| LLPS-Urm-0445 | Ursus maritimus | 43.24 | 5e-90 | 302 |
| LLPS-Fud-4082 | Fukomys damarensis | 43.17 | 8e-90 | 301 |
| LLPS-Dio-0111 | Dipodomys ordii | 43.0 | 8e-89 | 298 |
| LLPS-Bot-1925 | Bos taurus | 43.0 | 2e-90 | 302 |
| LLPS-Ran-1261 | Rattus norvegicus | 43.0 | 3e-89 | 299 |
| LLPS-Mea-3752 | Mesocricetus auratus | 43.0 | 1e-88 | 298 |
| LLPS-Poa-3845 | Pongo abelii | 43.0 | 6e-94 | 302 |
| LLPS-Nol-0822 | Nomascus leucogenys | 43.0 | 5e-90 | 301 |
| LLPS-Loa-2490 | Loxodonta africana | 43.0 | 5e-89 | 298 |
| LLPS-Pat-3918 | Pan troglodytes | 43.0 | 5e-90 | 302 |
| LLPS-Pap-0015 | Pan paniscus | 43.0 | 6e-90 | 301 |
| LLPS-Hos-0165 | Homo sapiens | 43.0 | 5e-90 | 301 |
| LLPS-Mod-3511 | Monodelphis domestica | 42.96 | 3e-91 | 305 |
| LLPS-Asm-1587 | Astyanax mexicanus | 42.92 | 1e-91 | 306 |
| LLPS-Mal-1354 | Mandrillus leucophaeus | 42.75 | 5e-90 | 301 |
| LLPS-Paa-3517 | Papio anubis | 42.75 | 2e-89 | 300 |
| LLPS-Mup-4371 | Mustela putorius furo | 42.75 | 9e-91 | 303 |
| LLPS-Cea-0691 | Cercocebus atys | 42.75 | 1e-89 | 301 |
| LLPS-Aon-3059 | Aotus nancymaae | 42.75 | 2e-89 | 300 |
| LLPS-Maf-4566 | Macaca fascicularis | 42.75 | 1e-89 | 301 |
| LLPS-Caj-2036 | Callithrix jacchus | 42.75 | 1e-89 | 300 |
| LLPS-Mam-0987 | Macaca mulatta | 42.75 | 1e-89 | 301 |
| LLPS-Man-3271 | Macaca nemestrina | 42.75 | 9e-90 | 301 |
| LLPS-Sus-4100 | Sus scrofa | 42.72 | 5e-90 | 302 |
| LLPS-Gog-0379 | Gorilla gorilla | 42.72 | 7e-85 | 287 |
| LLPS-Gaa-2630 | Gasterosteus aculeatus | 42.69 | 4e-92 | 307 |
| LLPS-Chs-1808 | Chlorocebus sabaeus | 42.51 | 4e-93 | 300 |
| LLPS-Fec-0293 | Felis catus | 42.51 | 5e-89 | 299 |
| LLPS-Otg-3868 | Otolemur garnettii | 42.51 | 4e-90 | 301 |
| LLPS-Myl-1659 | Myotis lucifugus | 42.47 | 5e-90 | 301 |
| LLPS-Orc-0959 | Oryctolagus cuniculus | 42.47 | 5e-91 | 304 |
| LLPS-Meg-1206 | Meleagris gallopavo | 42.45 | 3e-90 | 302 |
| LLPS-Sah-2275 | Sarcophilus harrisii | 42.22 | 3e-90 | 302 |
| LLPS-Mum-4829 | Mus musculus | 42.22 | 1e-88 | 298 |
| LLPS-Cap-3872 | Cavia porcellus | 42.22 | 3e-89 | 299 |
| LLPS-Gaga-1479 | Gallus gallus | 42.18 | 1e-91 | 306 |
| LLPS-Anp-2714 | Anas platyrhynchos | 42.18 | 5e-92 | 307 |
| LLPS-Pes-2310 | Pelodiscus sinensis | 42.14 | 5e-93 | 310 |
| LLPS-Rhb-2690 | Rhinopithecus bieti | 42.13 | 8e-78 | 255 |
| LLPS-Icp-1983 | Ictalurus punctatus | 41.98 | 2e-90 | 303 |
| LLPS-Tag-0200 | Taeniopygia guttata | 41.94 | 2e-91 | 306 |
| LLPS-Fia-2999 | Ficedula albicollis | 41.94 | 1e-91 | 306 |
| LLPS-Dar-2657 | Danio rerio | 41.92 | 2e-88 | 297 |
| LLPS-Anc-0980 | Anolis carolinensis | 41.88 | 6e-90 | 301 |
| LLPS-Scf-2542 | Scleropages formosus | 41.48 | 3e-86 | 291 |
| LLPS-Cae-0965 | Caenorhabditis elegans | 41.2 | 9e-79 | 270 |
| LLPS-Tar-0897 | Takifugu rubripes | 41.0 | 1e-90 | 303 |
| LLPS-Cas-1060 | Carlito syrichta | 40.95 | 1e-89 | 301 |
| LLPS-Ten-0598 | Tetraodon nigroviridis | 40.69 | 2e-67 | 232 |
| LLPS-Pug-1444 | Puccinia graminis | 39.57 | 3e-85 | 288 |
| LLPS-Usm-0875 | Ustilago maydis | 39.32 | 9e-85 | 287 |
| LLPS-Asf-1375 | Aspergillus flavus | 39.21 | 9e-92 | 293 |
| LLPS-Lac-2567 | Latimeria chalumnae | 39.19 | 8e-65 | 229 |
| LLPS-Spr-1512 | Sporisorium reilianum | 38.9 | 8e-83 | 281 |
| LLPS-Miv-0458 | Microbotryum violaceum | 38.6 | 3e-83 | 283 |
| LLPS-Abg-1884 | Absidia glauca | 38.54 | 4e-86 | 291 |
| LLPS-Crn-1157 | Cryptococcus neoformans | 38.51 | 4e-82 | 280 |
| LLPS-Mel-1228 | Melampsora laricipopulina | 38.05 | 1e-81 | 278 |
| LLPS-Leo-1112 | Lepisosteus oculatus | 37.34 | 1e-64 | 230 |
| LLPS-Put-0555 | Puccinia triticina | 36.64 | 2e-74 | 257 |
| LLPS-Xet-2220 | Xenopus tropicalis | 33.25 | 2e-52 | 195 |