LLPS-Brn-2212
BnaA09g52020D
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | BnaA09g52020D protein |
| Gene Name: | BnaA09g52020D, GSBRNA2T00004066001 |
| Ensembl Gene: | GSBRNA2T00112192001 |
| Ensembl Protein: | CDX74377 |
| Organism: | Brassica napus |
| Taxa ID: | 3708 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | CDX74377 | CDX74377 |
| UniProt | A0A078IKY3, A0A078IKY3_BRANA | |
| GeneBank | LK033021 | CDY51715.1 |
| RefSeq | XM_013867301.1, XM_013877259.1, XM_013879879.1 | XP_013722755.1, XP_013732713.1, XP_013735333.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MSTVGELACS YAVMILEDEG ISITSDKIAT LVKAAGVEIE SYWPMLFAKM AEKRNVTDLI 60 61 MNVGAGGGGG GAPVAAAAPA AAGGAAAAAP AKEEKKDEPA EESDGDLGFG LFD 113 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGTCGACGG TCGGAGAACT CGCTTGCAGC TACGCTGTTA TGATCCTTGA GGACGAGGGC 60 61 ATTTCCATCA CTTCTGACAA GATTGCGACT TTGGTCAAAG CCGCTGGTGT CGAGATTGAG 120 121 TCTTACTGGC CAATGCTATT CGCCAAGATG GCTGAGAAGC GTAATGTCAC TGACCTCATC 180 181 ATGAATGTTG GTGCTGGTGG CGGTGGAGGT GGTGCACCTG TTGCTGCCGC TGCACCCGCT 240 241 GCTGCTGGAG GTGCCGCAGC TGCTGCCCCT GCCAAGGAGG AGAAGAAGGA TGAACCAGCA 300 301 GAAGAGAGCG ATGGAGATCT TGGATTCGGC CTGTTCGATT AG 342 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Art-1730 | Arabidopsis thaliana | 98.23 | 3e-48 | 156 |
| LLPS-Bro-1970 | Brassica oleracea | 96.46 | 2e-46 | 151 |
| LLPS-Arl-0489 | Arabidopsis lyrata | 94.69 | 3e-47 | 154 |
| LLPS-Brr-2790 | Brassica rapa | 85.84 | 4e-39 | 133 |
| LLPS-Sot-1501 | Solanum tuberosum | 59.32 | 2e-18 | 82.8 |