LLPS-Brn-2090
BnaC08g49360D
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | BnaC08g49360D protein |
| Gene Name: | BnaC08g49360D, GSBRNA2T00027665001 |
| Ensembl Gene: | GSBRNA2T00027665001 |
| Ensembl Protein: | CDY59763 |
| Organism: | Brassica napus |
| Taxa ID: | 3708 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | CDY59763 | CDY59763 |
| UniProt | A0A078J5Z4, A0A078J5Z4_BRANA | |
| GeneBank | LK033803 | CDY59763.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MASPDVEYRC FVGGLAWATD DRALETAFSQ YGDVLDSKII NDRETGRSRG FGFVTFKDEK 60 61 SMKDAIEGMN GQDLDGRSIT VNEAQSRGGG GGGGRGGGGG GYRSGGGGGY GGGGGGYGGG 120 121 GGRREGGYSG GGGGGYSSRG GGGGGGYGGR RDGGEGGGYG GSGGGGW 167 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGCGTCCC CTGATGTCGA GTACCGGTGC TTCGTTGGAG GTCTAGCATG GGCCACCGAT 60 61 GACAGAGCTC TCGAGACCGC CTTCTCCCAA TACGGCGACG TTCTCGATTC CAAGATCATT 120 121 AACGATCGTG AGACGGGACG ATCAAGGGGG TTCGGATTCG TCACTTTCAA GGATGAGAAG 180 181 TCGATGAAGG ATGCCATCGA GGGGATGAAC GGGCAGGATC TCGACGGTCG CAGCATCACT 240 241 GTGAACGAGG CTCAGTCTCG TGGAGGCGGT GGCGGAGGAG GCCGCGGCGG AGGCGGCGGT 300 301 GGATACCGCA GCGGAGGTGG TGGTGGTTAC GGAGGAGGCG GTGGTGGATA CGGTGGAGGT 360 361 GGTGGAAGAC GCGAGGGTGG TTACAGTGGC GGTGGTGGAG GTGGTTACTC CTCGAGAGGA 420 421 GGTGGTGGCG GTGGAGGCTA CGGTGGCAGG CGTGATGGTG GTGAAGGTGG AGGTTACGGA 480 481 GGAAGCGGTG GTGGTGGTTG GTAA 504 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Bro-1590 | Brassica oleracea | 100.0 | 8e-57 | 182 |
| LLPS-Brr-2403 | Brassica rapa | 98.82 | 5e-56 | 180 |
| LLPS-Art-1377 | Arabidopsis thaliana | 95.29 | 9e-51 | 167 |
| LLPS-Met-1426 | Medicago truncatula | 87.06 | 5e-47 | 157 |
| LLPS-Hea-2165 | Helianthus annuus | 87.06 | 3e-46 | 156 |
| LLPS-Coc-1189 | Corchorus capsularis | 87.06 | 9e-48 | 159 |
| LLPS-Dac-2005 | Daucus carota | 85.88 | 4e-46 | 154 |
| LLPS-Thc-0775 | Theobroma cacao | 84.71 | 9e-47 | 156 |
| LLPS-Orni-1873 | Oryza nivara | 84.71 | 2e-46 | 155 |
| LLPS-Glm-2724 | Glycine max | 84.71 | 9e-46 | 154 |
| LLPS-Orr-1799 | Oryza rufipogon | 84.71 | 9e-47 | 157 |
| LLPS-Ors-0518 | Oryza sativa | 84.71 | 1e-46 | 157 |
| LLPS-Orp-1570 | Oryza punctata | 84.71 | 2e-46 | 155 |
| LLPS-Sot-0419 | Solanum tuberosum | 84.15 | 9e-43 | 146 |
| LLPS-Nia-2388 | Nicotiana attenuata | 84.15 | 7e-43 | 146 |
| LLPS-Orb-2342 | Oryza barthii | 83.75 | 4e-44 | 148 |
| LLPS-Amt-1728 | Amborella trichopoda | 83.53 | 2e-43 | 147 |
| LLPS-Sol-0321 | Solanum lycopersicum | 83.13 | 2e-43 | 145 |
| LLPS-Orgl-1132 | Oryza glumaepatula | 82.35 | 6e-46 | 153 |
| LLPS-Lep-2288 | Leersia perrieri | 82.35 | 8e-46 | 154 |
| LLPS-Mua-1059 | Musa acuminata | 82.35 | 6e-45 | 152 |
| LLPS-Ori-0132 | Oryza indica | 82.35 | 1e-45 | 154 |
| LLPS-Org-1940 | Oryza glaberrima | 82.35 | 1e-45 | 154 |
| LLPS-Orm-1265 | Oryza meridionalis | 82.35 | 9e-46 | 154 |
| LLPS-Gor-1857 | Gossypium raimondii | 82.35 | 3e-45 | 152 |
| LLPS-Mae-0812 | Manihot esculenta | 81.18 | 6e-44 | 149 |
| LLPS-Viv-2003 | Vitis vinifera | 81.18 | 2e-44 | 150 |
| LLPS-Pot-1672 | Populus trichocarpa | 80.72 | 2e-42 | 145 |
| LLPS-Brd-1211 | Brachypodium distachyon | 80.49 | 2e-41 | 142 |
| LLPS-Phv-0437 | Phaseolus vulgaris | 80.0 | 1e-42 | 146 |
| LLPS-Tra-3063 | Triticum aestivum | 79.27 | 2e-40 | 140 |
| LLPS-Via-0419 | Vigna angularis | 77.65 | 4e-41 | 142 |
| LLPS-Prp-0160 | Prunus persica | 77.65 | 2e-42 | 145 |
| LLPS-Zem-2097 | Zea mays | 76.47 | 1e-39 | 137 |
| LLPS-Hov-1939 | Hordeum vulgare | 73.26 | 1e-38 | 135 |
| LLPS-Tru-0751 | Triticum urartu | 73.26 | 5e-38 | 134 |
| LLPS-Sob-0280 | Sorghum bicolor | 72.94 | 1e-38 | 136 |
| LLPS-Cus-1472 | Cucumis sativus | 70.59 | 4e-38 | 134 |
| LLPS-Sem-1773 | Selaginella moellendorffii | 68.24 | 9e-34 | 122 |
| LLPS-Php-2523 | Physcomitrella patens | 60.76 | 8e-27 | 107 |
| LLPS-Sei-2336 | Setaria italica | 59.49 | 1e-26 | 105 |
| LLPS-Arl-1928 | Arabidopsis lyrata | 59.04 | 3e-28 | 110 |
| LLPS-Pug-0253 | Puccinia graminis | 58.33 | 2e-27 | 107 |
| LLPS-Scf-3138 | Scleropages formosus | 55.84 | 7e-21 | 89.7 |
| LLPS-Fuo-1143 | Fusarium oxysporum | 55.26 | 3e-22 | 91.7 |
| LLPS-Mel-0475 | Melampsora laricipopulina | 53.95 | 6e-22 | 92.0 |
| LLPS-Lac-3256 | Latimeria chalumnae | 53.85 | 4e-20 | 87.4 |
| LLPS-Fuv-1320 | Fusarium verticillioides | 52.63 | 4e-20 | 86.3 |
| LLPS-Gaa-3597 | Gasterosteus aculeatus | 52.56 | 9e-20 | 86.7 |
| LLPS-Icp-3746 | Ictalurus punctatus | 52.56 | 7e-20 | 88.2 |
| LLPS-Dar-2141 | Danio rerio | 52.56 | 2e-20 | 88.6 |
| LLPS-Vir-0928 | Vigna radiata | 51.95 | 3e-21 | 91.7 |