LLPS-Brn-2065
BnaCnng16030D
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | BnaCnng16030D protein |
| Gene Name: | BnaCnng16030D, GSBRNA2T00089039001 |
| Ensembl Gene: | GSBRNA2T00089039001 |
| Ensembl Protein: | CDY48212 |
| Organism: | Brassica napus |
| Taxa ID: | 3708 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus, Centrosome/Spindle pole body | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | CDY48212 | CDY48212 |
| UniProt | A0A078IDR7, A0A078IDR7_BRANA | |
| GeneBank | LK032759 | CDY48212.1 |
| RefSeq | XM_013817855.1 | XP_013673309.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MKEENAVSGI TIPLHARPLT RAYSKMITSS EVDATTQSLG HVARANTKRA ALDEKKASAP 60 61 KKLAVLKDIT NEISPKLENI KQIEKVDAVS TVANILKVID IDSNEKDPLL CSLYAPEIYH 120 121 NLRVAELQRR PFPDYLERTQ RDLTQTMRGI LVDWLVEVSE EYKLVPDTLY LTVYLIDWFL 180 181 HGNYIERQRL QLLGVTCMFI ASKYEEIFAP RIEEFCFITD STYTKDQVLE MESQVLKHFS 240 241 FQIYTPTPKT FLRRFLRAAH ASDLEKPSVE MEFLANYLME LTLIDYEFLK FLPSVIAASA 300 301 VFLAKWTLNQ SSHPWNPTLE HYTTFKASDL KASVHALQDL QLNIKGCSLA SIRMKYKQEK 360 361 FKSLAVLSSP ELPDRLF 377 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGAAGGAAG AGAATGCTGT TTCTGGCATC ACCATACCGC TCCATGCTCG CCCTCTCACT 60 61 CGTGCTTACT CTAAGATGAT AACATCATCA GAAGTGGATG CTACAACACA GAGTCTAGGA 120 121 CATGTCGCGA GAGCAAACAC AAAGAGAGCA GCCTTGGATG AGAAGAAAGC TAGTGCACCT 180 181 AAGAAGCTAG CTGTTCTTAA GGATATCACA AACGAGATCT CACCTAAGTT GGAGAACATC 240 241 AAGCAGATAG AGAAGGTGGA CGCTGTATCC ACTGTGGCAA ATATTCTGAA AGTCATTGAC 300 301 ATTGATTCAA ATGAGAAAGA TCCTCTATTG TGTAGCCTTT ATGCACCTGA AATCTACCAC 360 361 AATCTGCGAG TTGCCGAGCT TCAACGCAGA CCATTTCCGG ATTATTTGGA AAGAACACAA 420 421 AGAGATCTGA CTCAGACAAT GAGAGGAATA CTAGTTGATT GGCTTGTAGA GGTCTCAGAG 480 481 GAATACAAAC TTGTACCGGA CACACTCTAC CTCACAGTGT ATCTCATAGA TTGGTTTCTC 540 541 CATGGGAACT ACATTGAAAG GCAGAGGCTT CAATTGCTCG GCGTCACCTG TATGTTCATT 600 601 GCTTCAAAAT ACGAGGAGAT CTTTGCGCCA CGCATTGAGG AGTTCTGCTT CATCACTGAT 660 661 AGCACTTACA CAAAGGATCA GGTCCTGGAG ATGGAGAGCC AAGTACTAAA GCATTTTAGC 720 721 TTCCAGATTT ACACACCAAC TCCAAAGACA TTCCTCAGGA GGTTTCTCCG AGCAGCTCAT 780 781 GCTTCTGATC TGGAGAAACC AAGTGTTGAG ATGGAGTTTC TTGCAAACTA TCTCATGGAA 840 841 CTGACATTAA TAGACTATGA GTTCTTGAAG TTCCTTCCTT CGGTCATCGC TGCTTCAGCT 900 901 GTTTTTCTTG CCAAGTGGAC ACTGAACCAA TCAAGCCACC CTTGGAATCC AACTCTTGAG 960 961 CATTACACAA CTTTCAAAGC CTCAGACCTT AAAGCATCTG TTCACGCCTT GCAAGATCTG 1020 1021 CAGCTTAACA TCAAAGGGTG CTCCTTGGCA TCTATACGCA TGAAGTATAA GCAAGAGAAG 1080 1081 TTCAAATCCT TGGCGGTTTT GTCTTCTCCG GAGCTACCTG ACAGGCTATT CTGA 1134 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Bro-1019 | Brassica oleracea | 100.0 | 0.0 | 776 |
| LLPS-Brr-1424 | Brassica rapa | 93.63 | 0.0 | 731 |
| LLPS-Art-2916 | Arabidopsis thaliana | 85.41 | 0.0 | 518 |
| LLPS-Pot-2448 | Populus trichocarpa | 73.12 | 7e-148 | 434 |
| LLPS-Via-2386 | Vigna angularis | 72.14 | 2e-146 | 431 |
| LLPS-Prp-1139 | Prunus persica | 70.36 | 2e-144 | 426 |
| LLPS-Phv-2008 | Phaseolus vulgaris | 69.7 | 1e-147 | 434 |
| LLPS-Coc-0301 | Corchorus capsularis | 69.57 | 2e-143 | 435 |
| LLPS-Thc-0715 | Theobroma cacao | 68.93 | 1e-139 | 414 |
| LLPS-Gor-0620 | Gossypium raimondii | 68.61 | 3e-136 | 405 |
| LLPS-Viv-1426 | Vitis vinifera | 68.21 | 1e-133 | 395 |
| LLPS-Nia-2115 | Nicotiana attenuata | 68.09 | 2e-133 | 398 |
| LLPS-Met-1867 | Medicago truncatula | 67.73 | 8e-133 | 396 |
| LLPS-Glm-0668 | Glycine max | 65.57 | 5e-125 | 375 |
| LLPS-Sei-2304 | Setaria italica | 64.89 | 6e-130 | 389 |
| LLPS-Cus-1341 | Cucumis sativus | 64.64 | 1e-123 | 373 |
| LLPS-Sot-1189 | Solanum tuberosum | 64.26 | 6e-133 | 395 |
| LLPS-Orbr-1372 | Oryza brachyantha | 64.18 | 9e-125 | 376 |
| LLPS-Tru-0976 | Triticum urartu | 64.08 | 3e-122 | 370 |
| LLPS-Lep-1761 | Leersia perrieri | 63.48 | 6e-124 | 374 |
| LLPS-Sol-1184 | Solanum lycopersicum | 63.17 | 8e-137 | 407 |
| LLPS-Hov-1415 | Hordeum vulgare | 63.16 | 4e-118 | 359 |
| LLPS-Orm-1269 | Oryza meridionalis | 62.59 | 3e-126 | 379 |
| LLPS-Orp-1990 | Oryza punctata | 62.59 | 7e-127 | 381 |
| LLPS-Ors-0010 | Oryza sativa | 62.59 | 3e-126 | 379 |
| LLPS-Ori-0743 | Oryza indica | 62.59 | 1e-125 | 378 |
| LLPS-Orb-1405 | Oryza barthii | 62.59 | 5e-125 | 377 |
| LLPS-Orni-1781 | Oryza nivara | 62.59 | 1e-125 | 378 |
| LLPS-Orr-0035 | Oryza rufipogon | 62.24 | 2e-125 | 377 |
| LLPS-Amt-0073 | Amborella trichopoda | 61.73 | 5e-121 | 369 |
| LLPS-Sem-0233 | Selaginella moellendorffii | 60.52 | 1e-117 | 355 |
| LLPS-Mua-1263 | Musa acuminata | 60.12 | 7e-136 | 406 |
| LLPS-Php-1283 | Physcomitrella patens | 58.3 | 5e-111 | 340 |
| LLPS-Vir-1170 | Vigna radiata | 57.42 | 2e-120 | 365 |
| LLPS-Brd-1276 | Brachypodium distachyon | 53.76 | 6e-94 | 292 |
| LLPS-Orgl-0578 | Oryza glumaepatula | 53.4 | 2e-102 | 318 |
| LLPS-Zem-1750 | Zea mays | 53.23 | 3e-86 | 275 |
| LLPS-Tra-1319 | Triticum aestivum | 53.14 | 2e-91 | 286 |
| LLPS-Hea-1621 | Helianthus annuus | 52.4 | 8e-94 | 292 |
| LLPS-Mae-1500 | Manihot esculenta | 52.14 | 2e-95 | 296 |
| LLPS-Org-1306 | Oryza glaberrima | 50.89 | 7e-96 | 297 |
| LLPS-Dac-2180 | Daucus carota | 49.22 | 9e-101 | 309 |
| LLPS-Arl-2435 | Arabidopsis lyrata | 48.16 | 6e-102 | 313 |
| LLPS-Chs-0801 | Chlorocebus sabaeus | 44.73 | 8e-59 | 203 |
| LLPS-Chr-0822 | Chlamydomonas reinhardtii | 44.64 | 3e-74 | 243 |
| LLPS-Ten-1430 | Tetraodon nigroviridis | 44.57 | 6e-55 | 192 |
| LLPS-Tar-2475 | Takifugu rubripes | 44.57 | 5e-56 | 196 |
| LLPS-Mam-2894 | Macaca mulatta | 43.82 | 1e-58 | 202 |
| LLPS-Nol-0923 | Nomascus leucogenys | 43.82 | 7e-59 | 203 |
| LLPS-Man-1551 | Macaca nemestrina | 43.82 | 1e-58 | 202 |
| LLPS-Rhb-1223 | Rhinopithecus bieti | 43.82 | 1e-58 | 202 |
| LLPS-Mal-0053 | Mandrillus leucophaeus | 43.82 | 1e-58 | 202 |
| LLPS-Paa-1360 | Papio anubis | 43.82 | 1e-58 | 202 |
| LLPS-Cea-0379 | Cercocebus atys | 43.82 | 1e-58 | 202 |
| LLPS-Gog-1429 | Gorilla gorilla | 43.82 | 1e-58 | 202 |
| LLPS-Eqc-0283 | Equus caballus | 43.8 | 9e-56 | 194 |
| LLPS-Cii-1746 | Ciona intestinalis | 43.73 | 4e-65 | 219 |
| LLPS-Poa-0113 | Pongo abelii | 43.43 | 4e-58 | 201 |
| LLPS-Ict-2364 | Ictidomys tridecemlineatus | 43.41 | 1e-55 | 194 |
| LLPS-Dio-1269 | Dipodomys ordii | 43.41 | 3e-55 | 193 |
| LLPS-Cis-1560 | Ciona savignyi | 43.35 | 4e-56 | 190 |
| LLPS-Lac-0138 | Latimeria chalumnae | 43.04 | 6e-57 | 197 |
| LLPS-Urm-0461 | Ursus maritimus | 43.02 | 7e-55 | 192 |
| LLPS-Orn-0969 | Oreochromis niloticus | 43.02 | 9e-55 | 192 |
| LLPS-Sus-2219 | Sus scrofa | 43.02 | 6e-55 | 192 |
| LLPS-Hos-0966 | Homo sapiens | 43.01 | 4e-57 | 199 |
| LLPS-Pat-0566 | Pan troglodytes | 43.01 | 6e-58 | 200 |
| LLPS-Pap-4193 | Pan paniscus | 43.01 | 5e-57 | 199 |
| LLPS-Ova-0196 | Ovis aries | 42.8 | 1e-54 | 192 |
| LLPS-Mup-1593 | Mustela putorius furo | 42.69 | 2e-55 | 193 |
| LLPS-Aim-3364 | Ailuropoda melanoleuca | 42.64 | 8e-55 | 192 |
| LLPS-Fec-0700 | Felis catus | 42.25 | 2e-60 | 207 |
| LLPS-Orc-0874 | Oryctolagus cuniculus | 42.25 | 1e-54 | 191 |
| LLPS-Cap-1054 | Cavia porcellus | 42.23 | 6e-56 | 195 |
| LLPS-Xim-3658 | Xiphophorus maculatus | 42.03 | 1e-54 | 192 |
| LLPS-Caf-0413 | Canis familiaris | 41.9 | 8e-60 | 205 |
| LLPS-Loa-0171 | Loxodonta africana | 41.87 | 2e-59 | 204 |
| LLPS-Cas-1519 | Carlito syrichta | 41.64 | 1e-59 | 205 |
| LLPS-Aon-2474 | Aotus nancymaae | 41.64 | 3e-59 | 204 |
| LLPS-Caj-1439 | Callithrix jacchus | 41.55 | 3e-59 | 204 |
| LLPS-Myl-2778 | Myotis lucifugus | 41.52 | 6e-59 | 203 |
| LLPS-Tut-0881 | Tursiops truncatus | 41.43 | 2e-59 | 204 |
| LLPS-Mod-1934 | Monodelphis domestica | 41.28 | 2e-58 | 201 |
| LLPS-Otg-2426 | Otolemur garnettii | 41.18 | 7e-60 | 206 |
| LLPS-Asm-2543 | Astyanax mexicanus | 41.06 | 1e-54 | 191 |
| LLPS-Sah-0628 | Sarcophilus harrisii | 40.93 | 7e-58 | 200 |
| LLPS-Bot-0323 | Bos taurus | 40.91 | 1e-59 | 205 |
| LLPS-Scf-2728 | Scleropages formosus | 40.79 | 1e-54 | 192 |
| LLPS-Ora-0207 | Ornithorhynchus anatinus | 40.79 | 2e-59 | 204 |
| LLPS-Anc-0743 | Anolis carolinensis | 40.14 | 1e-58 | 202 |
| LLPS-Fud-0294 | Fukomys damarensis | 40.0 | 5e-56 | 195 |
| LLPS-Gaa-2938 | Gasterosteus aculeatus | 39.86 | 7e-56 | 194 |
| LLPS-Ran-2475 | Rattus norvegicus | 39.71 | 1e-56 | 197 |
| LLPS-Mum-2365 | Mus musculus | 39.64 | 1e-58 | 202 |
| LLPS-Scm-0341 | Scophthalmus maximus | 39.57 | 1e-54 | 191 |
| LLPS-Pes-1426 | Pelodiscus sinensis | 39.5 | 4e-57 | 198 |
| LLPS-Leo-3184 | Lepisosteus oculatus | 39.5 | 9e-55 | 191 |
| LLPS-Maf-2194 | Macaca fascicularis | 39.41 | 1e-55 | 196 |
| LLPS-Mea-0558 | Mesocricetus auratus | 39.29 | 3e-55 | 194 |
| LLPS-Pof-0013 | Poecilia formosa | 38.63 | 9e-58 | 199 |
| LLPS-Orl-2330 | Oryzias latipes | 38.43 | 4e-56 | 194 |
| LLPS-Icp-2628 | Ictalurus punctatus | 35.6 | 6e-55 | 192 |
| LLPS-Xet-3323 | Xenopus tropicalis | 34.78 | 8e-55 | 191 |