• Disorder▼
  • Domain▼
  • PTM▼
  • Variation▼
  • Mutation▼
  • Interaction▼
  • Disease▼
  • Drug▼
  • Physicochemical▼
  • Function▼
  • Proteomics▼
  • Structure▼
  • Localization▼
  • Expression▼
  • Element▼
  • Methylation▼

LLPS-Brn-1789
BnaC04g53600D

Integrated Annotations

▼ OVERVIEW

Status: Unreviewed
Protein Name: BnaC04g53600D protein
Gene Name: BnaC04g53600D, GSBRNA2T00068361001
Ensembl Gene: GSBRNA2T00116955001
Ensembl Protein: CDX74948
Organism: Brassica napus
Taxa ID: 3708
LLPS Type: LLPS regulator


▼ PROPERTY


——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:
CondensateEvidenceOrthologs
OthersPredicted from orthologs(View)

▼ CROSS REFERENCE

DatabaseNucleotide IDProtein ID
EnsemblCDX74948CDX74948
UniProtA0A078JNA9, A0A078JNA9_BRANA
GeneBankLK036713CDY67975.1

▼ SEQUENCE

Protein Sequence (FASTA)
1     MKRSHISSPR  SCSFSRPAIS  LLFVILLFLL  GLTLTSRKPS  GSPPNRILTG  KPNIPKLAYL  60
61    VTGTKGDAKR  VKRLLGAIHH  PRNYYLLHLD  LQASDEERMD  LAKYVRSEKE  KMRNVMVMGL  120
121   ADLVTEKGPT  MLASTLHGVA  ILLKKAEDWD  WFINLGSSDY  PLMPQDDILH  IFSYLPRYLN  180
181   FIEHTSNIGW  KENQRARPII  IDPGFYHSKK  SGVFWAKERR  SLPASFKLFM  GSTSVALTRP  240
241   FLEFCIWGWD  NLPRTLLMYY  TNFLLSSEGY  FQTVVCNNKD  FQNTTVNHDL  HYTHWDTVLQ  300
301   QRALNLTVED  FHDMVQSGAP  FAREFREDDL  VLDKIDAELL  GQTDGGLGLK  TREVVKPTVA  360
361   WKRLEKLMVK  LLDHENFRAK  QCK  383
Nucleotide CDS Sequence (FASTA)
1     ATGAAAAGAT  CTCACATTTC  TTCTCCTCGC  TCTTGCTCTT  TCTCTCGCCC  AGCGATCTCG  60
61    CTGCTCTTTG  TCATCCTCCT  GTTCCTCCTG  GGTTTAACAC  TAACCTCCCG  AAAACCATCC  120
121   GGTTCACCCC  CAAACCGGAT  CCTAACCGGG  AAACCCAACA  TCCCCAAGCT  CGCATACCTC  180
181   GTAACAGGCA  CGAAAGGAGA  CGCGAAACGA  GTGAAGCGTC  TCCTCGGAGC  GATACACCAT  240
241   CCTCGAAACT  ACTATCTTCT  CCATCTCGAC  CTTCAAGCCT  CCGACGAAGA  AAGGATGGAT  300
301   CTTGCCAAGT  ACGTGAGGTC  GGAGAAGGAG  AAGATGAGGA  ACGTTATGGT  GATGGGTTTG  360
361   GCTGACTTGG  TGACGGAGAA  AGGTCCGACT  ATGTTAGCTA  GCACGCTCCA  CGGTGTTGCG  420
421   ATTCTGTTGA  AGAAGGCTGA  GGATTGGGAT  TGGTTTATTA  ATCTTGGTTC  CTCTGATTAT  480
481   CCTCTCATGC  CTCAAGACGA  TATTTTGCAT  ATCTTCTCAT  ACTTGCCTCG  TTACTTGAAC  540
541   TTCATTGAGC  ACACAAGCAA  CATCGGTTGG  AAAGAGAACC  AGAGGGCAAG  ACCTATCATT  600
601   ATAGATCCTG  GCTTTTACCA  TTCGAAGAAA  TCTGGTGTCT  TTTGGGCTAA  AGAACGAAGA  660
661   TCATTGCCTG  CTTCCTTCAA  ACTTTTCATG  GGGTCAACAA  GTGTAGCTCT  AACAAGACCG  720
721   TTCCTCGAGT  TCTGCATATG  GGGATGGGAC  AACCTCCCAA  GAACGCTATT  AATGTACTAC  780
781   ACCAACTTCC  TTCTGTCATC  AGAAGGCTAT  TTTCAGACAG  TTGTGTGCAA  CAACAAAGAT  840
841   TTTCAAAACA  CAACGGTTAA  CCACGACTTG  CATTACACGC  ACTGGGATAC  TGTTCTCCAG  900
901   CAGCGTGCCC  TAAATCTAAC  GGTTGAGGAT  TTTCATGATA  TGGTTCAAAG  CGGAGCCCCA  960
961   TTTGCAAGGG  AGTTTCGAGA  GGATGATCTC  GTACTCGATA  AGATTGATGC  CGAGCTGCTT  1020
1021  GGTCAAACGG  ACGGTGGATT  GGGGTTGAAG  ACTCGGGAGG  TTGTTAAACC  AACGGTGGCT  1080
1081  TGGAAGAGGC  TAGAGAAGCT  CATGGTTAAG  CTTCTTGATC  ATGAGAATTT  CAGGGCTAAG  1140
1141  CAATGTAAAT  AG  1152

▼ ORTHOLOGY

DrLLPS IDOrganismIdentityE-valueScore
LLPS-Brr-2398Brassica rapa98.690.0 745
LLPS-Bro-1398Brassica oleracea97.910.0 744
LLPS-Art-2724Arabidopsis thaliana85.270.0 653
LLPS-Phv-0846Phaseolus vulgaris65.532e-162 469
LLPS-Met-0700Medicago truncatula65.061e-160 465
LLPS-Amt-2050Amborella trichopoda60.967e-147 428
LLPS-Cus-1742Cucumis sativus59.021e-126 379
LLPS-Mua-2184Musa acuminata58.43e-144 423
LLPS-Orbr-0142Oryza brachyantha57.261e-95 294
LLPS-Orr-0061Oryza rufipogon56.627e-116 349
LLPS-Orni-2077Oryza nivara56.626e-116 350
LLPS-Orb-0930Oryza barthii56.628e-116 349
LLPS-Orgl-0456Oryza glumaepatula56.623e-115 348
LLPS-Brd-0579Brachypodium distachyon54.861e-117 355
LLPS-Sem-2080Selaginella moellendorffii54.642e-139 411
LLPS-Php-1031Physcomitrella patens53.982e-133 397
LLPS-Arl-1345Arabidopsis lyrata53.895e-126 378
LLPS-Ors-2340Oryza sativa53.452e-122 369
LLPS-Orp-1965Oryza punctata53.454e-121 366
LLPS-Ori-0628Oryza indica53.452e-122 369
LLPS-Orm-1260Oryza meridionalis53.438e-116 350
LLPS-Org-0899Oryza glaberrima53.047e-118 355
LLPS-Tru-0263Triticum urartu52.332e-70 229
LLPS-Dac-0663Daucus carota51.142e-121 365
LLPS-Lep-1111Leersia perrieri50.826e-98 304
LLPS-Tra-2681Triticum aestivum49.594e-121 364
LLPS-Hov-2211Hordeum vulgare49.595e-122 367
LLPS-Pot-2165Populus trichocarpa49.441e-117 354
LLPS-Vir-1717Vigna radiata49.436e-115 347
LLPS-Thc-0701Theobroma cacao48.623e-84 269
LLPS-Zem-2016Zea mays48.51e-84 270
LLPS-Viv-0666Vitis vinifera48.211e-117 355
LLPS-Glm-1653Glycine max48.092e-116 351
LLPS-Sei-2506Setaria italica48.082e-117 357
LLPS-Mae-1953Manihot esculenta48.028e-117 352
LLPS-Gor-0913Gossypium raimondii47.994e-113 343
LLPS-Via-2079Vigna angularis47.412e-112 341
LLPS-Coc-1794Corchorus capsularis47.122e-78 254
LLPS-Prp-2214Prunus persica47.022e-84 270
LLPS-Nia-0990Nicotiana attenuata41.092e-83 266
LLPS-Sol-0751Solanum lycopersicum40.524e-81 261
LLPS-Sot-2175Solanum tuberosum40.525e-81 260
LLPS-Drm-2322Drosophila melanogaster28.811e-1479.7
LLPS-Dar-1904Danio rerio28.392e-1582.0
LLPS-Orl-0599Oryzias latipes27.855e-1993.2
LLPS-Asm-1068Astyanax mexicanus27.784e-1684.3
LLPS-Xet-3328Xenopus tropicalis27.64e-1684.0
LLPS-Chc-1150Chondrus crispus27.557e-2197.1
LLPS-Gaa-1964Gasterosteus aculeatus27.412e-1788.2
LLPS-Mod-3099Monodelphis domestica27.33e-1890.5
LLPS-Icp-1774Ictalurus punctatus27.248e-1683.2
LLPS-Orn-2179Oreochromis niloticus27.224e-1787.4
LLPS-Fia-0025Ficedula albicollis27.13e-1994.0
LLPS-Leo-3794Lepisosteus oculatus27.091e-1685.9
LLPS-Otg-3344Otolemur garnettii26.957e-1683.6
LLPS-Mal-0789Mandrillus leucophaeus26.891e-1582.8
LLPS-Hos-3542Homo sapiens26.811e-1582.4
LLPS-Man-4029Macaca nemestrina26.819e-1683.2
LLPS-Mam-3839Macaca mulatta26.819e-1683.2
LLPS-Chs-0107Chlorocebus sabaeus26.815e-1684.0
LLPS-Maf-2149Macaca fascicularis26.817e-1683.6
LLPS-Cea-3270Cercocebus atys26.818e-1683.2
LLPS-Paa-4519Papio anubis26.819e-1683.2
LLPS-Pof-1044Poecilia formosa26.792e-1788.2
LLPS-Xim-2364Xiphophorus maculatus26.791e-1788.6
LLPS-Sus-4732Sus scrofa26.737e-1786.7
LLPS-Pat-4891Pan troglodytes26.652e-1582.4
LLPS-Gog-1982Gorilla gorilla26.652e-1582.4
LLPS-Ten-0242Tetraodon nigroviridis26.632e-1788.2
LLPS-Nol-3495Nomascus leucogenys26.521e-1582.8
LLPS-Mum-4186Mus musculus26.522e-1685.1
LLPS-Tar-2018Takifugu rubripes26.485e-1787.0
LLPS-Cii-1355Ciona intestinalis26.453e-1890.5
LLPS-Fec-3916Felis catus26.434e-1684.0
LLPS-Dio-0084Dipodomys ordii26.437e-1683.6
LLPS-Scf-3116Scleropages formosus26.352e-1582.0
LLPS-Poa-0862Pongo abelii26.281e-1582.8
LLPS-Caj-4157Callithrix jacchus26.281e-1685.5
LLPS-Aon-4559Aotus nancymaae26.282e-1684.7
LLPS-Mea-0561Mesocricetus auratus26.212e-1582.0
LLPS-Eqc-2168Equus caballus26.131e-1582.8
LLPS-Caf-3171Canis familiaris26.131e-1582.8
LLPS-Cis-1591Ciona savignyi26.134e-1890.5
LLPS-Ere-0395Erinaceus europaeus26.131e-1582.8
LLPS-Ova-4265Ovis aries26.136e-1683.6
LLPS-Mup-3555Mustela putorius furo26.138e-1683.2
LLPS-Bot-4259Bos taurus26.135e-1684.0
LLPS-Orc-3130Oryctolagus cuniculus26.113e-1581.6
LLPS-Ran-4433Rattus norvegicus26.112e-1582.0
LLPS-Scm-2437Scophthalmus maximus26.16e-1786.7
LLPS-Ict-3637Ictidomys tridecemlineatus25.96e-1683.6
LLPS-Loa-2871Loxodonta africana25.834e-1580.9
LLPS-Aim-2856Ailuropoda melanoleuca25.831e-1582.4
LLPS-Lac-1448Latimeria chalumnae25.73e-1581.6
LLPS-Cap-3161Cavia porcellus25.643e-1581.6
LLPS-Pes-3238Pelodiscus sinensis25.571e-1685.9
LLPS-Gaga-2103Gallus gallus25.552e-1685.1
LLPS-Myl-4191Myotis lucifugus25.536e-1580.5
LLPS-Anc-1825Anolis carolinensis25.415e-1787.0
LLPS-Cae-0135Caenorhabditis elegans25.093e-1375.5
LLPS-Rhb-3917Rhinopithecus bieti24.763e-1787.8
LLPS-Pap-2994Pan paniscus24.765e-1787.0
LLPS-Cas-2665Carlito syrichta24.762e-1685.1
LLPS-Fud-0316Fukomys damarensis24.763e-1684.7
LLPS-Urm-3753Ursus maritimus24.443e-1478.2
LLPS-Tag-3189Taeniopygia guttata24.446e-1786.7
LLPS-Sah-3435Sarcophilus harrisii24.441e-1685.9
LLPS-Meg-2612Meleagris gallopavo24.124e-1684.0
LLPS-Anp-2411Anas platyrhynchos24.122e-1685.1
LLPS-Ora-3362Ornithorhynchus anatinus23.295e-1065.5