DrLLPS - Data resource of LLPS

LLPS-Brn-1647
BnaC06g10860D

Integrated Annotations

▼ OVERVIEW


Status:	Unreviewed
Protein Name:	BnaC06g10860D protein
Gene Name:	BnaC06g10860D, GSBRNA2T00034743001
Ensembl Gene:	GSBRNA2T00034743001
Ensembl Protein:	CDY26110
Organism:	Brassica napus
Taxa ID:	3708
LLPS Type:	Others

▼ PROPERTY

——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:

Condensate	Evidence	Orthologs
Nuclear speckle, Others	Predicted from orthologs	(View)

Organism	DrLLPS ID	UniProt ID	LLPS type	Condensate	Identity	E-value	Score
Mus musculus	LLPS-Mum-0646	Q9R0U0	Client	Nuclear speckle, Neuronal granule	48.35	8e-23	99.4
Homo sapiens	LLPS-Hos-1688	O75494	Client	Nuclear speckle	48.35	8e-23	99.4

▼ CROSS REFERENCE

Database	Nucleotide ID	Protein ID
Ensembl	CDY26110	CDY26110
UniProt		A0A078GI38, A0A078GI38_BRANA
GeneBank	LK032185	CDY26110.1

▼ SEQUENCE

Protein Sequence (FASTA)
1 MRGRSYTPSP PRRGYGRRGR RSPSPRGGGR YGGAPSVDLP TSLLVRNLRH DCRQEDLRRS 60 61 FELFGPLKDI YMPRDYYTGD PRGFGFVQFV DPADAAEAKY QMDGYHLLGR ELTVVFAEEN 120 121 RKKPTEMRAR ERGGGRSVRS RDRRRSPPRY YSRSPPPRRG RSRSQSGDYY SPPSTRHHSR 180 181 SISPREERYA RGRSYSRSPA YNGSRGRSVT PARSKSRRIS RSPSPGRSIS PSPRRNVSRS 240 241 PSPRRSRSNT PVPARGRSPR RKRSNTSRSN TPRSNTPVPA TNRSHREEEY EDRSPSQ 297
Nucleotide CDS Sequence (FASTA)
1 ATGAGGGGAA GGAGCTACAC TCCGTCACCA CCAAGGCGGG GTTATGGGAG GAGGGGTCGA 60 61 AGAAGCCCAA GCCCTAGAGG AGGAGGCCGT TATGGTGGAG CTCCTAGTGT CGACCTCCCT 120 121 ACCAGTCTTT TGGTTCGCAA TCTACGCCAT GACTGCAGGC AAGAAGATCT CAGGAGGTCA 180 181 TTCGAGCTGT TCGGGCCTCT TAAGGACATC TATATGCCTA GGGATTACTA TACTGGAGAT 240 241 CCGCGAGGGT TTGGTTTCGT ACAGTTTGTG GATCCTGCTG ATGCTGCTGA GGCAAAATAT 300 301 CAAATGGATG GTTACCATCT ACTTGGGCGT GAGCTGACTG TTGTGTTTGC AGAAGAGAAC 360 361 AGGAAGAAAC CGACTGAAAT GAGAGCAAGG GAGCGTGGTG GAGGAAGGAG CGTAAGGTCT 420 421 CGAGACAGGA GGCGTAGTCC CCCTCGTTAC TACTCTCGCT CTCCTCCACC TCGACGTGGT 480 481 AGATCTCGGT CACAGAGTGG TGATTATTAT TCTCCTCCCT CTACAAGACA TCACTCAAGG 540 541 TCTATCTCTC CCAGGGAAGA ACGATATGCT AGGGGGAGAT CATACTCGCG CTCACCCGCC 600 601 TACAATGGCT CCAGGGGTCG CAGTGTAACT CCAGCTAGAA GTAAGAGCCG CCGCATAAGC 660 661 CGTAGCCCAA GTCCAGGAAG AAGCATTAGC CCTAGTCCGA GAAGAAACGT AAGCCGTAGT 720 721 CCAAGCCCGA GGAGAAGCAG GAGCAACACA CCTGTACCAG CCAGAGGCCG CAGCCCAAGG 780 781 AGAAAGAGGA GCAACACATC TAGGAGCAAC ACTCCTAGGA GCAACACTCC TGTACCAGCT 840 841 ACAAACCGCA GCCACCGTGA GGAGGAGTAC GAAGACCGTT CACCAAGCCA GTGA 894

▼ ORTHOLOGY

DrLLPS ID	Organism	Identity	E-value	Score
LLPS-Bro-0285	Brassica oleracea	100.0	1e-87	271
LLPS-Mua-1433	Musa acuminata	86.17	7e-51	174
LLPS-Mae-1763	Manihot esculenta	83.33	3e-45	159
LLPS-Arl-0973	Arabidopsis lyrata	81.56	4e-68	220
LLPS-Sei-1359	Setaria italica	78.72	8e-45	157
LLPS-Brr-1096	Brassica rapa	77.89	1e-44	157
LLPS-Org-0980	Oryza glaberrima	77.66	9e-44	155
LLPS-Lep-0117	Leersia perrieri	77.66	3e-45	159
LLPS-Orp-1785	Oryza punctata	76.6	1e-43	154
LLPS-Ors-0450	Oryza sativa	76.6	2e-43	154
LLPS-Orr-1508	Oryza rufipogon	76.6	2e-43	154
LLPS-Orm-1339	Oryza meridionalis	76.6	2e-43	154
LLPS-Orni-1326	Oryza nivara	76.6	2e-43	154
LLPS-Ori-1905	Oryza indica	76.6	3e-43	153
LLPS-Orgl-1185	Oryza glumaepatula	76.6	2e-43	154
LLPS-Art-2436	Arabidopsis thaliana	76.0	1e-64	210
LLPS-Orbr-2196	Oryza brachyantha	75.53	5e-43	153
LLPS-Tru-0324	Triticum urartu	74.47	5e-41	149
LLPS-Tra-2625	Triticum aestivum	74.47	4e-42	150
LLPS-Brd-1173	Brachypodium distachyon	74.47	7e-42	149
LLPS-Hov-1524	Hordeum vulgare	74.47	5e-42	150
LLPS-Sob-1025	Sorghum bicolor	73.4	1e-42	151
LLPS-Thc-1541	Theobroma cacao	68.26	3e-54	184
LLPS-Php-0945	Physcomitrella patens	67.39	4e-39	144
LLPS-Glm-2775	Glycine max	67.2	8e-57	190
LLPS-Via-0471	Vigna angularis	67.03	1e-56	189
LLPS-Gor-2358	Gossypium raimondii	66.86	3e-56	189
LLPS-Phv-1857	Phaseolus vulgaris	66.29	9e-54	182
LLPS-Coc-2266	Corchorus capsularis	65.77	2e-45	159
LLPS-Amt-0242	Amborella trichopoda	63.33	2e-33	126
LLPS-Prp-1463	Prunus persica	63.04	4e-50	172
LLPS-Pot-1133	Populus trichocarpa	62.5	1e-28	115
LLPS-Viv-0096	Vitis vinifera	62.3	2e-56	188
LLPS-Met-0338	Medicago truncatula	62.16	6e-54	182
LLPS-Sem-1113	Selaginella moellendorffii	61.96	1e-34	127
LLPS-Orb-1925	Oryza barthii	61.8	4e-31	122
LLPS-Hea-0862	Helianthus annuus	61.11	3e-31	124
LLPS-Vir-0157	Vigna radiata	60.98	3e-39	144
LLPS-Cus-2350	Cucumis sativus	60.67	1e-30	122
LLPS-Sot-1055	Solanum tuberosum	59.78	1e-53	181
LLPS-Zem-0945	Zea mays	59.55	5e-29	119
LLPS-Nia-1643	Nicotiana attenuata	57.95	2e-27	112
LLPS-Chr-0765	Chlamydomonas reinhardtii	54.02	4e-23	100
LLPS-Sol-0516	Solanum lycopersicum	53.93	2e-26	107
LLPS-Drm-1144	Drosophila melanogaster	51.81	1e-15	77.4
LLPS-Fud-0375	Fukomys damarensis	50.0	5e-13	70.1
LLPS-Mal-0005	Mandrillus leucophaeus	50.0	3e-13	70.9
LLPS-Orn-0381	Oreochromis niloticus	49.43	4e-15	76.6
LLPS-Scm-1354	Scophthalmus maximus	49.43	2e-15	77.0
LLPS-Lac-0009	Latimeria chalumnae	49.43	1e-14	75.5
LLPS-Dar-1435	Danio rerio	49.43	1e-14	75.5
LLPS-Pof-2322	Poecilia formosa	49.43	6e-15	76.3
LLPS-Xet-0814	Xenopus tropicalis	49.43	3e-14	73.9
LLPS-Ten-1830	Tetraodon nigroviridis	49.43	5e-15	76.3
LLPS-Icp-0343	Ictalurus punctatus	49.43	1e-14	74.7
LLPS-Asm-2322	Astyanax mexicanus	49.43	2e-14	74.3
LLPS-Leo-0469	Lepisosteus oculatus	49.43	1e-14	75.1
LLPS-Scf-0127	Scleropages formosus	49.43	2e-14	74.3
LLPS-Gaa-0398	Gasterosteus aculeatus	49.43	2e-15	77.0
LLPS-Tar-2060	Takifugu rubripes	49.43	6e-15	76.3
LLPS-Xim-0762	Xiphophorus maculatus	49.43	5e-15	76.3
LLPS-Mod-1731	Monodelphis domestica	49.4	7e-14	73.9
LLPS-Ict-1856	Ictidomys tridecemlineatus	49.4	8e-14	72.0
LLPS-Dio-1029	Dipodomys ordii	49.4	6e-14	72.8
LLPS-Rhb-1164	Rhinopithecus bieti	48.35	5e-23	100
LLPS-Orc-0794	Oryctolagus cuniculus	48.35	6e-23	97.8
LLPS-Man-0032	Macaca nemestrina	48.35	5e-23	100
LLPS-Fec-2805	Felis catus	48.35	5e-23	100
LLPS-Hos-1688	Homo sapiens	48.35	5e-23	100
LLPS-Pat-1620	Pan troglodytes	48.35	5e-23	100
LLPS-Pap-1006	Pan paniscus	48.35	5e-23	100
LLPS-Nol-3967	Nomascus leucogenys	48.35	5e-23	100
LLPS-Gaga-0188	Gallus gallus	48.35	4e-23	100
LLPS-Mam-3326	Macaca mulatta	48.35	5e-23	100
LLPS-Cap-4696	Cavia porcellus	48.35	5e-23	100
LLPS-Eqc-2294	Equus caballus	48.35	5e-23	100
LLPS-Poa-0185	Pongo abelii	48.35	5e-23	100
LLPS-Caj-4255	Callithrix jacchus	48.35	6e-23	99.8
LLPS-Gog-2220	Gorilla gorilla	48.35	5e-23	100
LLPS-Sus-2078	Sus scrofa	48.35	5e-23	100
LLPS-Cea-3134	Cercocebus atys	48.35	5e-23	100
LLPS-Cii-2326	Ciona intestinalis	48.35	2e-21	95.1
LLPS-Maf-1974	Macaca fascicularis	48.35	5e-23	100
LLPS-Mum-0646	Mus musculus	48.35	5e-23	100
LLPS-Mea-0826	Mesocricetus auratus	48.35	5e-23	100
LLPS-Mup-2175	Mustela putorius furo	48.35	5e-23	100
LLPS-Paa-2471	Papio anubis	48.35	5e-23	100
LLPS-Ran-0395	Rattus norvegicus	48.35	6e-23	97.8
LLPS-Bot-1635	Bos taurus	48.35	5e-23	98.6
LLPS-Fia-1326	Ficedula albicollis	48.28	3e-14	73.9
LLPS-Otg-0441	Otolemur garnettii	48.28	1e-13	72.4
LLPS-Tag-0429	Taeniopygia guttata	48.28	1e-14	74.7
LLPS-Anc-0330	Anolis carolinensis	48.28	6e-14	73.2
LLPS-Caf-0987	Canis familiaris	48.28	8e-14	72.8
LLPS-Aon-0004	Aotus nancymaae	48.28	1e-13	72.4
LLPS-Orl-0328	Oryzias latipes	48.28	4e-14	73.9
LLPS-Ora-1191	Ornithorhynchus anatinus	48.28	2e-14	72.4
LLPS-Chs-1462	Chlorocebus sabaeus	48.28	1e-13	72.4
LLPS-Meg-0817	Meleagris gallopavo	48.0	3e-11	65.5
LLPS-Sah-0368	Sarcophilus harrisii	47.73	4e-12	68.2
LLPS-Loa-0076	Loxodonta africana	47.31	3e-21	94.7
LLPS-Aim-0055	Ailuropoda melanoleuca	47.31	3e-21	94.7
LLPS-Myl-1880	Myotis lucifugus	47.31	3e-21	94.7
LLPS-Cis-2029	Ciona savignyi	47.25	2e-20	91.7
LLPS-Ova-2851	Ovis aries	47.25	2e-22	98.6
LLPS-Tut-0082	Tursiops truncatus	47.25	3e-22	97.8
LLPS-Pes-3513	Pelodiscus sinensis	46.84	3e-18	85.9
LLPS-Anp-1320	Anas platyrhynchos	46.25	1e-18	87.0
LLPS-Cas-0452	Carlito syrichta	45.05	6e-19	88.2
LLPS-Ere-0559	Erinaceus europaeus	44.57	6e-19	88.2
LLPS-Cae-0425	Caenorhabditis elegans	42.05	9e-14	72.4

LLPS-Brn-1647BnaC06g10860D

Protein Sequence

Nucleotide Sequence

LLPS-Brn-1647
BnaC06g10860D