LLPS-Brn-1423
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Ensembl Gene: | GSBRNA2T00099270001 |
| Ensembl Protein: | CDX68045 |
| Organism: | Brassica napus |
| Taxa ID: | 3708 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Centrosome/Spindle pole body | Predicted from orthologs | (View) |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MEKEEEANLP RDKPPKSLAR PILNHETSSS SSSPELIRHL QAAFKRHRPL NKMQTTTIGP 60 61 RRSVAAQRQP SRSSTADGQR PQDVVSLSQS LAANTLLTHD SRNLPSSSSA AGGESTENAS 120 121 ITTCSVSGTV DHMLGGSFNQ QDRQMDLPKP LKGNLDIGSR NESVSTKVQS LVSSSTLTSN 180 181 DMEWDATNQA AASKHQNLQS VDSEISLKSE YKVSSSLAKL GEFRNFLNQP ASQCSVMGSS 240 241 CATTTSIHSS SAPMLNATTQ VSRYPGAVPI PSQGNLASSR PSFKDSDILH ANKDVPLPEM 300 301 PASATDQEVR VKETNMSKQQ QCTTVVEPPT LSRGSDATAR VPDDMLTSVS SQPQKADKLE 360 361 KVASSKGTSA PRKRNYDPDL FFKVNGKLYQ RLGKIGSGGS SEVHKVISSD CTIYALKKIK 420 421 LKGRDYATAY GFCQEIGYLK KLKGKTNIIQ LIDYEVTDKA LLQEVLNGTM SNKDARVKDD 480 481 GFIYMVLEYG EIDLAHMLSQ KWKEIEGSDR TIDENWLRFY WQQILQAVNT IHEERIVHSD 540 541 LKPANFLLVR GFLKLIDFGI AKAINSDTTN IQRDSQVGTL SYMSPEAFMC NESDENGNTI 600 601 KCGRPSDIWS LGCILYQMVY GRTPFADYKT FWAKFKVITD PNHEITYNQL SNPWLVDLMK 660 661 KCLAWDRNQR WRIPELLQHP FLAPPIPPEP RVGSSSIQLL SHIAECFGSD DNKSNKRLGK 720 721 LESITEQEQL RAYLEVRYFL CNENYRKTIN LSKPCLLI 758 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGAAAAGG AGGAGGAGGC TAATCTTCCA CGGGATAAAC CTCCGAAGAG TCTAGCTCGA 60 61 CCCATCTTAA ACCACGAAAC CTCTTCTTCT TCCTCCTCTC CTGAGCTAAT ACGCCATCTC 120 121 CAAGCCGCTT TCAAGCGCCA CCGTCCCCTC AATAAGATGC AGACAACCAC TATAGGTCCT 180 181 CGACGAAGTG TTGCTGCCCA ACGACAACCT TCTAGGAGCT CTACAGCTGA TGGGCAGAGA 240 241 CCTCAGGATG TTGTTTCCCT CAGTCAGAGT CTCGCTGCCA ATACATTATT GACACATGAT 300 301 TCAAGAAACT TACCCTCTTC TTCTTCTGCT GCTGGTGGAG AATCCACCGA GAATGCGTCT 360 361 ATCACAACAT GTTCAGTTTC AGGAACTGTT GATCATATGC TTGGTGGGAG TTTCAACCAA 420 421 CAAGATAGGC AGATGGATTT GCCGAAGCCC TTAAAAGGCA ACCTGGATAT AGGATCTAGG 480 481 AATGAAAGTG TCAGCACAAA GGTCCAGTCT CTTGTTAGCA GCAGCACCCT CACATCTAAT 540 541 GATATGGAAT GGGATGCAAC AAATCAGGCT GCAGCATCAA AACATCAGAA TCTCCAATCT 600 601 GTTGATTCTG AGATCAGTTT GAAATCTGAA TACAAGGTTT CATCTTCCTT GGCAAAGCTT 660 661 GGAGAATTTC GCAACTTCTT GAATCAACCT GCATCTCAGT GTTCTGTCAT GGGGTCATCA 720 721 TGTGCGACAA CCACGTCAAT TCATTCCTCT TCAGCTCCTA TGCTAAATGC GACAACCCAA 780 781 GTCTCTCGTT ATCCGGGTGC TGTTCCAATT CCAAGTCAAG GGAACTTGGC TTCTTCTCGT 840 841 CCTTCTTTCA AGGACAGCGA CATTCTGCAT GCCAATAAAG ATGTCCCTTT ACCTGAGATG 900 901 CCAGCCTCAG CTACTGATCA AGAAGTAAGA GTCAAAGAGA CAAATATGTC TAAGCAACAA 960 961 CAGTGCACTA CAGTAGTTGA ACCTCCAACT TTAAGTCGTG GGAGTGATGC TACTGCTCGT 1020 1021 GTACCCGATG ACATGCTCAC CAGTGTTAGC TCACAGCCGC AAAAAGCAGA TAAGCTTGAA 1080 1081 AAGGTCGCAA GTAGCAAAGG GACATCAGCG CCTCGTAAAA GAAACTACGA CCCAGACTTG 1140 1141 TTCTTTAAAG TCAATGGCAA ACTCTATCAG AGGCTTGGCA AGATAGGAAG TGGAGGAAGC 1200 1201 AGTGAGGTCC ACAAGGTTAT TTCATCAGAT TGTACCATAT ATGCTCTCAA GAAAATCAAG 1260 1261 CTCAAGGGTC GTGACTACGC TACAGCATAT GGGTTTTGCC AAGAAATTGG ATATTTAAAG 1320 1321 AAGCTGAAAG GGAAAACCAA CATCATTCAG CTTATAGACT ACGAGGTTAC AGATAAGGCT 1380 1381 TTACTCCAGG AGGTATTGAA TGGCACGATG AGTAACAAAG ATGCAAGAGT TAAGGATGAT 1440 1441 GGGTTTATAT ATATGGTACT AGAGTACGGA GAAATCGATC TAGCTCACAT GCTGTCTCAA 1500 1501 AAATGGAAGG AAATCGAAGG ATCAGACCGG ACTATTGATG AAAACTGGCT TCGGTTCTAC 1560 1561 TGGCAGCAAA TACTTCAAGC TGTGAACACC ATACACGAGG AACGCATTGT CCACTCTGAT 1620 1621 TTGAAACCGG CAAACTTCCT TCTTGTCAGA GGCTTCTTGA AGCTTATCGA CTTTGGTATC 1680 1681 GCTAAGGCCA TTAACAGCGA CACTACAAAC ATCCAACGAG ATTCACAGGT GGGGACATTG 1740 1741 AGTTACATGT CACCAGAAGC GTTCATGTGC AACGAGAGCG ATGAGAATGG GAACACAATA 1800 1801 AAATGTGGAA GGCCATCAGA TATATGGTCG CTTGGTTGCA TACTATACCA AATGGTATAC 1860 1861 GGAAGAACGC CTTTTGCAGA TTACAAGACC TTCTGGGCAA AGTTCAAAGT CATAACCGAT 1920 1921 CCAAACCATG AGATTACTTA CAATCAGCTC TCGAACCCTT GGCTTGTTGA CCTAATGAAG 1980 1981 AAATGTCTAG CTTGGGACCG TAACCAAAGA TGGAGAATCC CTGAGCTTCT CCAACATCCT 2040 2041 TTCCTTGCCC CTCCTATCCC ACCTGAGCCT CGAGTCGGAA GCAGCAGCAT TCAACTGCTT 2100 2101 AGTCACATAG CTGAATGTTT TGGTAGTGAT GATAACAAAT CAAACAAGAG ACTAGGGAAG 2160 2161 CTAGAGAGTA TTACAGAACA AGAACAACTT CGAGCTTACT TGGAAGTTCG CTACTTCCTC 2220 2221 TGCAATGAAA ACTACAGAAA GACCATAAAC CTCAGCAAAC CATGTTTGCT TATTTGA 2277 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Brr-1923 | Brassica rapa | 97.64 | 0.0 | 1370 |
| LLPS-Bro-0379 | Brassica oleracea | 95.1 | 0.0 | 1334 |
| LLPS-Arl-0142 | Arabidopsis lyrata | 78.73 | 0.0 | 1111 |
| LLPS-Art-2081 | Arabidopsis thaliana | 74.51 | 0.0 | 1057 |
| LLPS-Sol-0501 | Solanum lycopersicum | 68.57 | 4e-128 | 394 |
| LLPS-Glm-2658 | Glycine max | 66.92 | 0.0 | 701 |
| LLPS-Php-0717 | Physcomitrella patens | 64.72 | 7e-133 | 428 |
| LLPS-Sot-0312 | Solanum tuberosum | 64.25 | 0.0 | 671 |
| LLPS-Mua-1865 | Musa acuminata | 63.77 | 0.0 | 599 |
| LLPS-Phv-0088 | Phaseolus vulgaris | 63.13 | 0.0 | 706 |
| LLPS-Orp-0030 | Oryza punctata | 63.12 | 0.0 | 584 |
| LLPS-Orbr-0068 | Oryza brachyantha | 62.91 | 0.0 | 582 |
| LLPS-Lep-0978 | Leersia perrieri | 62.61 | 0.0 | 582 |
| LLPS-Met-2120 | Medicago truncatula | 62.61 | 0.0 | 687 |
| LLPS-Via-0435 | Vigna angularis | 62.52 | 0.0 | 679 |
| LLPS-Orr-0019 | Oryza rufipogon | 61.68 | 0.0 | 582 |
| LLPS-Orm-0279 | Oryza meridionalis | 61.68 | 0.0 | 581 |
| LLPS-Orgl-0419 | Oryza glumaepatula | 61.68 | 0.0 | 582 |
| LLPS-Ori-0482 | Oryza indica | 61.68 | 0.0 | 582 |
| LLPS-Orni-0271 | Oryza nivara | 61.68 | 0.0 | 582 |
| LLPS-Org-0723 | Oryza glaberrima | 61.47 | 0.0 | 580 |
| LLPS-Ors-1228 | Oryza sativa | 61.47 | 0.0 | 581 |
| LLPS-Orb-0485 | Oryza barthii | 61.47 | 0.0 | 581 |
| LLPS-Sem-0318 | Selaginella moellendorffii | 59.88 | 6e-132 | 402 |
| LLPS-Coc-1406 | Corchorus capsularis | 58.51 | 0.0 | 802 |
| LLPS-Zem-0872 | Zea mays | 58.38 | 0.0 | 558 |
| LLPS-Thc-1341 | Theobroma cacao | 57.93 | 0.0 | 786 |
| LLPS-Brd-0092 | Brachypodium distachyon | 57.62 | 0.0 | 569 |
| LLPS-Sei-1236 | Setaria italica | 57.37 | 0.0 | 563 |
| LLPS-Amt-0396 | Amborella trichopoda | 56.81 | 0.0 | 595 |
| LLPS-Sob-1743 | Sorghum bicolor | 56.56 | 0.0 | 558 |
| LLPS-Mae-0240 | Manihot esculenta | 56.23 | 0.0 | 766 |
| LLPS-Tra-1753 | Triticum aestivum | 56.05 | 0.0 | 555 |
| LLPS-Vir-0312 | Vigna radiata | 55.71 | 0.0 | 602 |
| LLPS-Tru-0955 | Triticum urartu | 55.56 | 0.0 | 558 |
| LLPS-Hov-0013 | Hordeum vulgare | 55.47 | 4e-180 | 542 |
| LLPS-Prp-0383 | Prunus persica | 55.09 | 0.0 | 780 |
| LLPS-Gor-2431 | Gossypium raimondii | 54.98 | 0.0 | 729 |
| LLPS-Pot-1573 | Populus trichocarpa | 54.89 | 0.0 | 766 |
| LLPS-Cus-0641 | Cucumis sativus | 54.45 | 0.0 | 717 |
| LLPS-Nia-0076 | Nicotiana attenuata | 54.35 | 0.0 | 701 |
| LLPS-Viv-0900 | Vitis vinifera | 53.84 | 0.0 | 735 |
| LLPS-Hea-0476 | Helianthus annuus | 51.88 | 0.0 | 620 |
| LLPS-Osl-0261 | Ostreococcus lucimarinus | 50.81 | 1e-95 | 306 |
| LLPS-Gas-0518 | Galdieria sulphuraria | 48.12 | 8e-57 | 212 |
| LLPS-Cym-1097 | Cyanidioschyzon merolae | 47.18 | 1e-87 | 304 |
| LLPS-Chr-0372 | Chlamydomonas reinhardtii | 46.71 | 2e-86 | 303 |
| LLPS-Ten-0256 | Tetraodon nigroviridis | 46.24 | 4e-37 | 153 |
| LLPS-Ova-0425 | Ovis aries | 45.7 | 7e-66 | 239 |
| LLPS-Bot-2830 | Bos taurus | 45.51 | 3e-65 | 238 |
| LLPS-Scj-0743 | Schizosaccharomyces japonicus | 45.37 | 3e-78 | 270 |
| LLPS-Aim-0793 | Ailuropoda melanoleuca | 45.36 | 2e-65 | 238 |
| LLPS-Chs-1165 | Chlorocebus sabaeus | 45.36 | 2e-66 | 241 |
| LLPS-Dio-1406 | Dipodomys ordii | 45.18 | 2e-67 | 244 |
| LLPS-Nol-0331 | Nomascus leucogenys | 45.03 | 3e-65 | 238 |
| LLPS-Cas-0415 | Carlito syrichta | 45.03 | 1e-67 | 244 |
| LLPS-Orc-0218 | Oryctolagus cuniculus | 45.03 | 2e-65 | 238 |
| LLPS-Mod-1749 | Monodelphis domestica | 44.92 | 8e-67 | 243 |
| LLPS-Loa-0383 | Loxodonta africana | 44.88 | 2e-58 | 218 |
| LLPS-Ran-0409 | Rattus norvegicus | 44.84 | 3e-67 | 244 |
| LLPS-Myl-0041 | Myotis lucifugus | 44.7 | 6e-64 | 234 |
| LLPS-Scc-0534 | Schizosaccharomyces cryophilus | 44.58 | 1e-77 | 270 |
| LLPS-Rhb-0479 | Rhinopithecus bieti | 44.5 | 2e-42 | 169 |
| LLPS-Chc-0224 | Chondrus crispus | 44.19 | 3e-75 | 256 |
| LLPS-Gaga-0552 | Gallus gallus | 43.23 | 4e-64 | 235 |
| LLPS-Tut-0385 | Tursiops truncatus | 43.03 | 4e-66 | 240 |
| LLPS-Fud-1047 | Fukomys damarensis | 43.03 | 6e-65 | 237 |
| LLPS-Anc-0197 | Anolis carolinensis | 43.0 | 5e-62 | 229 |
| LLPS-Mum-0764 | Mus musculus | 42.9 | 6e-64 | 234 |
| LLPS-Mam-0170 | Macaca mulatta | 42.72 | 2e-66 | 241 |
| LLPS-Poa-2300 | Pongo abelii | 42.72 | 2e-66 | 241 |
| LLPS-Pat-1289 | Pan troglodytes | 42.72 | 6e-66 | 240 |
| LLPS-Pap-1451 | Pan paniscus | 42.72 | 7e-66 | 239 |
| LLPS-Fec-0595 | Felis catus | 42.72 | 1e-64 | 236 |
| LLPS-Pes-0000 | Pelodiscus sinensis | 42.72 | 5e-62 | 229 |
| LLPS-Mal-2127 | Mandrillus leucophaeus | 42.72 | 4e-66 | 240 |
| LLPS-Paa-2804 | Papio anubis | 42.72 | 3e-66 | 241 |
| LLPS-Mup-2030 | Mustela putorius furo | 42.72 | 5e-65 | 237 |
| LLPS-Cea-0522 | Cercocebus atys | 42.72 | 3e-66 | 241 |
| LLPS-Aon-1055 | Aotus nancymaae | 42.72 | 6e-66 | 240 |
| LLPS-Maf-2488 | Macaca fascicularis | 42.72 | 2e-66 | 241 |
| LLPS-Gog-1939 | Gorilla gorilla | 42.72 | 2e-66 | 241 |
| LLPS-Meg-0481 | Meleagris gallopavo | 42.57 | 7e-63 | 231 |
| LLPS-Lac-0285 | Latimeria chalumnae | 42.57 | 3e-62 | 229 |
| LLPS-Crn-0515 | Cryptococcus neoformans | 42.52 | 2e-75 | 266 |
| LLPS-Pytr-0444 | Pyrenophora triticirepentis | 42.45 | 2e-61 | 221 |
| LLPS-Caf-1059 | Canis familiaris | 42.41 | 2e-64 | 236 |
| LLPS-Cap-0484 | Cavia porcellus | 42.41 | 1e-65 | 238 |
| LLPS-Eqc-0057 | Equus caballus | 42.41 | 6e-66 | 240 |
| LLPS-Man-0896 | Macaca nemestrina | 42.41 | 2e-65 | 239 |
| LLPS-Hos-0134 | Homo sapiens | 42.41 | 2e-66 | 241 |
| LLPS-Urm-1354 | Ursus maritimus | 42.41 | 1e-64 | 236 |
| LLPS-Sus-2701 | Sus scrofa | 42.41 | 5e-64 | 234 |
| LLPS-Caj-0853 | Callithrix jacchus | 42.41 | 6e-65 | 237 |
| LLPS-Tag-0529 | Taeniopygia guttata | 42.38 | 4e-64 | 229 |
| LLPS-Ora-0126 | Ornithorhynchus anatinus | 42.38 | 1e-63 | 233 |
| LLPS-Otg-0005 | Otolemur garnettii | 42.11 | 4e-65 | 238 |
| LLPS-Fia-0379 | Ficedula albicollis | 42.05 | 2e-61 | 226 |
| LLPS-Sah-1251 | Sarcophilus harrisii | 41.95 | 1e-63 | 233 |
| LLPS-Xet-0188 | Xenopus tropicalis | 41.9 | 4e-51 | 195 |
| LLPS-Scp-0571 | Schizosaccharomyces pombe | 41.83 | 6e-76 | 265 |
| LLPS-Miv-0817 | Microbotryum violaceum | 41.49 | 1e-71 | 259 |
| LLPS-Scs-0662 | Sclerotinia sclerotiorum | 41.23 | 5e-64 | 234 |
| LLPS-Dar-1332 | Danio rerio | 41.01 | 1e-60 | 225 |
| LLPS-Leo-1552 | Lepisosteus oculatus | 40.97 | 3e-60 | 223 |
| LLPS-Blg-0075 | Blumeria graminis | 40.94 | 2e-64 | 235 |
| LLPS-Icp-2385 | Ictalurus punctatus | 40.65 | 4e-61 | 226 |
| LLPS-Mel-0345 | Melampsora laricipopulina | 40.6 | 2e-49 | 181 |
| LLPS-Usm-0994 | Ustilago maydis | 40.48 | 2e-42 | 170 |
| LLPS-Asn-0736 | Aspergillus nidulans | 40.45 | 1e-64 | 236 |
| LLPS-Tum-0339 | Tuber melanosporum | 40.37 | 1e-63 | 233 |
| LLPS-Dos-0422 | Dothistroma septosporum | 40.19 | 5e-60 | 213 |
| LLPS-Put-0205 | Puccinia triticina | 39.94 | 8e-64 | 234 |
| LLPS-Kop-0743 | Komagataella pastoris | 39.81 | 3e-58 | 213 |
| LLPS-Orl-0827 | Oryzias latipes | 39.68 | 5e-60 | 223 |
| LLPS-Asm-0211 | Astyanax mexicanus | 39.68 | 5e-60 | 223 |
| LLPS-Tar-1253 | Takifugu rubripes | 39.67 | 4e-58 | 218 |
| LLPS-Lem-1144 | Leptosphaeria maculans | 39.6 | 4e-66 | 236 |
| LLPS-Orn-1076 | Oreochromis niloticus | 39.56 | 4e-61 | 226 |
| LLPS-Ast-0559 | Aspergillus terreus | 39.49 | 5e-64 | 231 |
| LLPS-Asni-0613 | Aspergillus niger | 39.49 | 1e-62 | 230 |
| LLPS-Pof-0046 | Poecilia formosa | 39.35 | 6e-59 | 221 |
| LLPS-Gaa-1385 | Gasterosteus aculeatus | 39.33 | 2e-58 | 219 |
| LLPS-Pyt-0351 | Pyrenophora teres | 39.32 | 1e-65 | 234 |
| LLPS-Nef-0077 | Neosartorya fischeri | 39.17 | 2e-63 | 232 |
| LLPS-Xim-1261 | Xiphophorus maculatus | 39.03 | 7e-59 | 219 |
| LLPS-Pug-0693 | Puccinia graminis | 39.01 | 6e-62 | 231 |
| LLPS-Aso-0003 | Aspergillus oryzae | 38.96 | 3e-63 | 232 |
| LLPS-Asf-0086 | Aspergillus flavus | 38.96 | 3e-63 | 232 |
| LLPS-Cii-0569 | Ciona intestinalis | 38.91 | 3e-50 | 191 |
| LLPS-Asc-0420 | Aspergillus clavatus | 38.85 | 5e-62 | 228 |
| LLPS-Cis-0210 | Ciona savignyi | 38.72 | 6e-56 | 198 |
| LLPS-Map-0518 | Magnaporthe poae | 38.72 | 7e-63 | 231 |
| LLPS-Scm-0203 | Scophthalmus maximus | 38.71 | 4e-57 | 215 |
| LLPS-Asfu-0967 | Aspergillus fumigatus | 38.54 | 6e-62 | 228 |
| LLPS-Fuo-0172 | Fusarium oxysporum | 38.44 | 2e-60 | 224 |
| LLPS-Yal-0540 | Yarrowia lipolytica | 38.26 | 3e-63 | 230 |
| LLPS-Ved-0313 | Verticillium dahliae | 38.24 | 2e-61 | 226 |
| LLPS-Fus-0933 | Fusarium solani | 38.12 | 6e-59 | 219 |
| LLPS-Fuv-0543 | Fusarium verticillioides | 38.12 | 1e-59 | 221 |
| LLPS-Gag-0126 | Gaeumannomyces graminis | 38.11 | 5e-63 | 232 |
| LLPS-Trr-0122 | Trichoderma reesei | 38.01 | 4e-60 | 222 |
| LLPS-Cogr-0331 | Colletotrichum graminicola | 37.93 | 7e-63 | 231 |
| LLPS-Cog-0646 | Colletotrichum gloeosporioides | 37.93 | 1e-61 | 227 |
| LLPS-Coo-0488 | Colletotrichum orbiculare | 37.93 | 1e-61 | 227 |
| LLPS-Trv-0545 | Trichoderma virens | 37.81 | 1e-58 | 218 |
| LLPS-Mao-0073 | Magnaporthe oryzae | 37.8 | 1e-61 | 228 |
| LLPS-Phn-0430 | Phaeosphaeria nodorum | 37.71 | 7e-63 | 227 |
| LLPS-Beb-0180 | Beauveria bassiana | 37.54 | 3e-60 | 223 |
| LLPS-Spr-0165 | Sporisorium reilianum | 37.3 | 1e-43 | 174 |
| LLPS-Sac-0049 | Saccharomyces cerevisiae | 36.52 | 3e-63 | 231 |
| LLPS-Nec-0060 | Neurospora crassa | 36.42 | 2e-59 | 221 |
| LLPS-Asg-0361 | Ashbya gossypii | 36.21 | 7e-62 | 228 |
| LLPS-Anp-1146 | Anas platyrhynchos | 35.96 | 7e-43 | 171 |
| LLPS-Drm-0004 | Drosophila melanogaster | 35.06 | 4e-42 | 167 |
| LLPS-Ere-0212 | Erinaceus europaeus | 31.35 | 4e-24 | 108 |
| LLPS-Abg-0622 | Absidia glauca | 29.41 | 5e-29 | 126 |