• Disorder▼
  • Domain▼
  • PTM▼
  • Variation▼
  • Mutation▼
  • Interaction▼
  • Disease▼
  • Drug▼
  • Physicochemical▼
  • Function▼
  • Proteomics▼
  • Structure▼
  • Localization▼
  • Expression▼
  • Element▼
  • Methylation▼

LLPS-Brn-1301
BnaC06g40840D

Integrated Annotations

▼ OVERVIEW

Status: Unreviewed
Protein Name: BnaC06g40840D protein
Gene Name: BnaC06g40840D, GSBRNA2T00043812001
Ensembl Gene: GSBRNA2T00153908001
Ensembl Protein: CDX92200
Organism: Brassica napus
Taxa ID: 3708
LLPS Type: Others


▼ PROPERTY


——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:
CondensateEvidenceOrthologs
Nucleolus, Centrosome/Spindle pole bodyPredicted from orthologs(View)

▼ CROSS REFERENCE

DatabaseNucleotide IDProtein ID
EnsemblCDX92200CDX92200
UniProtA0A078JBC7, A0A078JBC7_BRANA
GeneBankLK034591CDY64888.1

▼ SEQUENCE

Protein Sequence (FASTA)
1     MAEGLVLKGT  MRAHTDMVTA  IATPIDNSDI  IVTSSRDKSI  ILWKLTKDDK  SYGVAQRRLT  60
61    GHSHFVEDVV  LSSDGQFALS  GSWDGELRLW  DLATGVSTRR  FVGHTKDVLS  VAFSVDNRQI  120
121   VSASRDRTIK  LWNTLGECKY  TISEADGHKD  WISCVRFSPN  TLVPTIVSAS  WDKTVKVWNL  180
181   QNCKLKSSLA  GHSGYLNTVA  VSPDGSLCAS  GGKDGVILLW  DLAEGKKLYS  LEGGSIIHSL  240
241   CFSPNRYWLC  AATESSIKIW  DLESKTVVDE  LKVDLKAEAE  KDGGAGTGNQ  KKVNYCTSLN  300
301   WSADGSTLFS  GYTDGVVRVW  GIGRY  325
Nucleotide CDS Sequence (FASTA)
1     ATGGCCGAGG  GACTCGTACT  GAAAGGCACA  ATGCGCGCCC  ACACCGACAT  GGTCACCGCC  60
61    ATCGCCACGC  CGATCGACAA  CTCCGACATC  ATCGTCACCT  CCTCCCGCGA  CAAATCCATC  120
121   ATCCTCTGGA  AGCTCACCAA  GGACGACAAG  TCCTACGGCG  TCGCCCAGCG  TCGTCTCACA  180
181   GGCCACTCCC  ACTTCGTCGA  AGACGTGGTC  CTCTCCTCCG  ACGGGCAGTT  CGCTCTCTCC  240
241   GGAAGCTGGG  ACGGCGAGCT  CCGTCTCTGG  GACCTAGCCA  CCGGCGTCTC  CACCCGCAGA  300
301   TTCGTGGGAC  ACACGAAAGA  CGTCCTCTCC  GTGGCCTTCT  CCGTCGACAA  CCGTCAGATC  360
361   GTGTCGGCCT  CTCGTGACCG  TACGATCAAG  CTTTGGAACA  CGCTTGGTGA  GTGTAAGTAC  420
421   ACGATCTCTG  AAGCTGATGG  ACACAAAGAT  TGGATTAGCT  GTGTTAGGTT  TAGCCCCAAC  480
481   ACGCTTGTCC  CAACCATTGT  TTCGGCTTCT  TGGGATAAGA  CTGTGAAAGT  GTGGAATCTT  540
541   CAGAACTGTA  AGCTGAAGAG  CTCTCTCGCT  GGGCACTCGG  GCTACCTCAA  CACTGTGGCT  600
601   GTGTCGCCTG  ATGGTTCGTT  GTGTGCTAGT  GGTGGGAAAG  ATGGTGTGAT  CTTGTTGTGG  660
661   GATTTGGCTG  AGGGGAAGAA  GTTGTACTCG  CTTGAGGGGG  GTTCGATTAT  TCACTCGCTT  720
721   TGCTTTAGTC  CCAATAGGTA  CTGGCTGTGT  GCTGCGACTG  AGAGCAGTAT  CAAGATCTGG  780
781   GATCTTGAGA  GTAAGACGGT  TGTTGATGAG  TTGAAGGTTG  ACCTTAAGGC  GGAGGCTGAG  840
841   AAGGATGGTG  GTGCCGGAAC  TGGTAACCAG  AAGAAGGTGA  ACTACTGCAC  AAGCTTGAAC  900
901   TGGAGCGCAG  ATGGAAGCAC  ACTGTTCAGT  GGTTACACTG  ATGGAGTTGT  CAGGGTCTGG  960
961   GGCATTGGTC  GTTACTAG  978

▼ ORTHOLOGY

DrLLPS IDOrganismIdentityE-valueScore
LLPS-Brr-0818Brassica rapa99.690.0 655
LLPS-Bro-0029Brassica oleracea98.470.0 647
LLPS-Arl-1163Arabidopsis lyrata95.410.0 629
LLPS-Art-0589Arabidopsis thaliana92.940.0 619
LLPS-Vir-0260Vigna radiata85.540.0 579
LLPS-Gor-1280Gossypium raimondii85.540.0 587
LLPS-Cus-0353Cucumis sativus85.320.0 581
LLPS-Met-1097Medicago truncatula85.230.0 578
LLPS-Phv-0150Phaseolus vulgaris85.230.0 578
LLPS-Glm-0639Glycine max84.920.0 580
LLPS-Pot-0840Populus trichocarpa84.920.0 572
LLPS-Viv-0656Vitis vinifera84.710.0 570
LLPS-Via-0238Vigna angularis84.620.0 572
LLPS-Thc-0167Theobroma cacao84.310.0 578
LLPS-Mae-1604Manihot esculenta84.050.0 568
LLPS-Prp-0259Prunus persica83.790.0 568
LLPS-Sot-0417Solanum tuberosum83.590.0 558
LLPS-Dac-0003Daucus carota83.280.0 565
LLPS-Sol-0783Solanum lycopersicum82.040.0 553
LLPS-Hea-0201Helianthus annuus81.960.0 555
LLPS-Nia-0675Nicotiana attenuata80.310.0 548
LLPS-Amt-0007Amborella trichopoda75.080.0 523
LLPS-Tru-1206Triticum urartu73.451e-143 417
LLPS-Php-1456Physcomitrella patens72.531e-175 496
LLPS-Zem-0486Zea mays71.131e-166 474
LLPS-Brd-0502Brachypodium distachyon70.876e-166 473
LLPS-Ori-0581Oryza indica70.542e-167 476
LLPS-Orgl-0067Oryza glumaepatula70.542e-167 476
LLPS-Orp-1747Oryza punctata70.542e-167 476
LLPS-Ors-0594Oryza sativa70.542e-167 476
LLPS-Org-1027Oryza glaberrima70.542e-167 476
LLPS-Orm-1721Oryza meridionalis70.542e-167 476
LLPS-Orr-0242Oryza rufipogon70.542e-167 476
LLPS-Lep-0300Leersia perrieri70.334e-167 476
LLPS-Sei-0764Setaria italica69.941e-164 471
LLPS-Sob-1597Sorghum bicolor69.942e-165 471
LLPS-Tra-1341Triticum aestivum69.851e-164 469
LLPS-Chc-0143Chondrus crispus69.638e-160 457
LLPS-Anp-1859Anas platyrhynchos69.586e-143 412
LLPS-Mua-0277Musa acuminata69.052e-163 465
LLPS-Orni-0333Oryza nivara68.337e-166 473
LLPS-Hov-1565Hordeum vulgare68.264e-162 463
LLPS-Sem-0288Selaginella moellendorffii68.21e-163 466
LLPS-Osl-0039Ostreococcus lucimarinus68.111e-166 474
LLPS-Poa-3042Pongo abelii67.831e-109 325
LLPS-Orbr-0155Oryza brachyantha67.743e-164 468
LLPS-Chr-0759Chlamydomonas reinhardtii67.691e-164 469
LLPS-Orb-0484Oryza barthii66.672e-153 441
LLPS-Caj-1948Callithrix jacchus66.464e-154 446
LLPS-Icp-4219Ictalurus punctatus66.465e-155 444
LLPS-Fud-2025Fukomys damarensis66.469e-155 444
LLPS-Sus-0593Sus scrofa66.469e-155 444
LLPS-Aon-0358Aotus nancymaae66.469e-155 444
LLPS-Cea-2289Cercocebus atys66.461e-153 444
LLPS-Sah-0381Sarcophilus harrisii66.469e-155 444
LLPS-Chs-1450Chlorocebus sabaeus66.463e-154 445
LLPS-Ora-0221Ornithorhynchus anatinus66.469e-155 444
LLPS-Mum-0164Mus musculus66.469e-155 444
LLPS-Maf-1202Macaca fascicularis66.461e-153 444
LLPS-Ova-0457Ovis aries66.469e-155 444
LLPS-Aim-1480Ailuropoda melanoleuca66.469e-155 444
LLPS-Paa-0343Papio anubis66.461e-153 444
LLPS-Ran-2717Rattus norvegicus66.469e-155 444
LLPS-Bot-2451Bos taurus66.469e-155 444
LLPS-Dio-1735Dipodomys ordii66.469e-155 444
LLPS-Otg-1218Otolemur garnettii66.469e-155 444
LLPS-Loa-2151Loxodonta africana66.469e-155 444
LLPS-Man-1547Macaca nemestrina66.469e-155 444
LLPS-Mod-1272Monodelphis domestica66.469e-155 444
LLPS-Fec-0018Felis catus66.461e-153 445
LLPS-Meg-1105Meleagris gallopavo66.469e-155 444
LLPS-Pap-1201Pan paniscus66.469e-155 444
LLPS-Urm-2156Ursus maritimus66.463e-154 445
LLPS-Anc-1649Anolis carolinensis66.469e-155 444
LLPS-Ict-1990Ictidomys tridecemlineatus66.469e-155 444
LLPS-Xet-0179Xenopus tropicalis66.463e-155 445
LLPS-Gaga-0428Gallus gallus66.469e-155 444
LLPS-Mam-0490Macaca mulatta66.461e-153 444
LLPS-Cap-0844Cavia porcellus66.469e-155 444
LLPS-Eqc-2390Equus caballus66.469e-155 444
LLPS-Caf-1086Canis familiaris66.469e-155 444
LLPS-Myl-0857Myotis lucifugus66.152e-152 437
LLPS-Dar-0523Danio rerio66.156e-155 444
LLPS-Asm-1339Astyanax mexicanus65.849e-155 444
LLPS-Leo-0397Lepisosteus oculatus65.849e-154 441
LLPS-Scf-2772Scleropages formosus65.846e-154 442
LLPS-Mup-0941Mustela putorius furo65.532e-149 430
LLPS-Orn-2127Oreochromis niloticus65.531e-154 443
LLPS-Orl-0817Oryzias latipes65.226e-154 442
LLPS-Gas-0800Galdieria sulphuraria65.223e-153 440
LLPS-Xim-0653Xiphophorus maculatus65.222e-153 441
LLPS-Put-0153Puccinia triticina65.228e-150 431
LLPS-Lac-1634Latimeria chalumnae64.917e-152 436
LLPS-Pof-0609Poecilia formosa64.911e-152 439
LLPS-Rhb-1893Rhinopithecus bieti64.893e-146 422
LLPS-Abg-0184Absidia glauca64.698e-148 426
LLPS-Tar-0166Takifugu rubripes64.63e-152 437
LLPS-Gaa-0270Gasterosteus aculeatus64.381e-149 431
LLPS-Phn-0160Phaeosphaeria nodorum64.325e-98 296
LLPS-Mel-1082Melampsora laricipopulina64.292e-149 430
LLPS-Orc-2957Oryctolagus cuniculus64.296e-147 425
LLPS-Ten-0607Tetraodon nigroviridis64.299e-151 434
LLPS-Scm-0380Scophthalmus maximus64.171e-148 428
LLPS-Crn-0610Cryptococcus neoformans63.666e-149 429
LLPS-Miv-0821Microbotryum violaceum63.662e-144 417
LLPS-Drm-0452Drosophila melanogaster63.162e-142 412
LLPS-Mea-1069Mesocricetus auratus63.012e-91 280
LLPS-Spr-1072Sporisorium reilianum62.731e-146 423
LLPS-Usm-0324Ustilago maydis62.737e-147 424
LLPS-Cii-0567Ciona intestinalis62.621e-142 413
LLPS-Cog-0612Colletotrichum gloeosporioides62.463e-132 385
LLPS-Beb-0620Beauveria bassiana62.426e-145 419
LLPS-Cis-0034Ciona savignyi62.313e-142 412
LLPS-Cas-1042Carlito syrichta61.954e-133 388
LLPS-Mao-0182Magnaporthe oryzae61.86e-145 419
LLPS-Scs-0449Sclerotinia sclerotiorum61.84e-145 419
LLPS-Fus-0338Fusarium solani61.84e-144 417
LLPS-Cogr-0890Colletotrichum graminicola61.88e-145 419
LLPS-Dos-0435Dothistroma septosporum61.89e-142 410
LLPS-Ast-0530Aspergillus terreus61.773e-129 378
LLPS-Coo-0458Colletotrichum orbiculare61.492e-144 417
LLPS-Gag-0528Gaeumannomyces graminis61.494e-144 417
LLPS-Fuv-0887Fusarium verticillioides61.499e-144 416
LLPS-Zyt-0079Zymoseptoria tritici61.491e-141 410
LLPS-Asf-0018Aspergillus flavus61.495e-142 411
LLPS-Aso-0265Aspergillus oryzae61.495e-142 411
LLPS-Ved-0834Verticillium dahliae61.499e-143 413
LLPS-Fuo-0089Fusarium oxysporum61.499e-144 416
LLPS-Map-0297Magnaporthe poae61.181e-143 416
LLPS-Asn-0920Aspergillus nidulans61.181e-141 410
LLPS-Pyt-0165Pyrenophora teres61.184e-142 411
LLPS-Lem-0248Leptosphaeria maculans61.184e-142 411
LLPS-Pytr-0056Pyrenophora triticirepentis61.183e-142 412
LLPS-Nec-0104Neurospora crassa60.873e-143 414
LLPS-Trr-0454Trichoderma reesei60.871e-142 412
LLPS-Trv-0873Trichoderma virens60.876e-143 414
LLPS-Asni-0098Aspergillus niger60.565e-140 406
LLPS-Nef-0355Neosartorya fischeri60.562e-141 410
LLPS-Asfu-1071Aspergillus fumigatus60.562e-141 410
LLPS-Asc-0245Aspergillus clavatus60.251e-140 408
LLPS-Blg-0046Blumeria graminis59.948e-142 410
LLPS-Scj-0368Schizosaccharomyces japonicus59.881e-137 400
LLPS-Cae-0078Caenorhabditis elegans58.727e-130 380
LLPS-Cym-0253Cyanidioschyzon merolae58.72e-134 392
LLPS-Scp-0099Schizosaccharomyces pombe58.022e-132 387
LLPS-Tum-0133Tuber melanosporum57.991e-131 384
LLPS-Scc-0237Schizosaccharomyces cryophilus57.722e-132 387
LLPS-Yal-0222Yarrowia lipolytica57.674e-131 384
LLPS-Mal-1419Mandrillus leucophaeus53.582e-107 323
LLPS-Nol-1382Nomascus leucogenys53.197e-112 335
LLPS-Gog-0391Gorilla gorilla52.994e-113 338
LLPS-Hos-1047Homo sapiens52.993e-113 338
LLPS-Pat-2190Pan troglodytes52.993e-113 338
LLPS-Kop-0500Komagataella pastoris49.694e-101 307
LLPS-Pug-0462Puccinia graminis49.694e-98 298
LLPS-Fia-1205Ficedula albicollis48.452e-92 285
LLPS-Asg-0045Ashbya gossypii48.34e-103 313
LLPS-Sac-1038Saccharomyces cerevisiae46.62e-97 298
LLPS-Tag-1264Taeniopygia guttata31.664e-37 142