LLPS-Brn-1100
BnaC04g08320D
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | BnaC04g08320D protein |
| Gene Name: | BnaC04g08320D, GSBRNA2T00053942001 |
| Ensembl Gene: | GSBRNA2T00053942001 |
| Ensembl Protein: | CDY33207 |
| Organism: | Brassica napus |
| Taxa ID: | 3708 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | CDY33207 | CDY33207 |
| UniProt | A0A078H703, A0A078H703_BRANA | |
| GeneBank | LK032308 | CDY33207.1 |
| RefSeq | XM_013821760.1, XM_013821761.1 | XP_013677214.1, XP_013677215.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MGRCPTRKVK KRRLSHKTAR RDKFEVKGDD LVYTELRKPE TETKPLELSE DLPGMGQFYC 60 61 LHCDRYFCNV SVRDDHFKTK KHKKRVKLMN GPAPHSQLDA DLAAGMGMPD NGPKLMAA 118 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGGAAGAT GCCCTACTAG GAAGGTGAAG AAGAGGCGTT TGTCACACAA GACAGCTCGT 60 61 CGTGACAAAT TCGAAGTCAA AGGAGACGAT TTAGTGTACA CTGAGCTGCG TAAACCAGAG 120 121 ACGGAGACAA AGCCTTTGGA GCTTAGCGAG GACTTGCCTG GAATGGGACA GTTCTACTGC 180 181 TTACACTGCG ATCGGTACTT CTGTAATGTG TCGGTGAGAG ATGATCATTT TAAGACGAAG 240 241 AAACACAAGA AGCGTGTGAA GTTAATGAAT GGACCTGCGC CACACTCACA ACTCGATGCT 300 301 GATTTGGCCG CTGGAATGGG AATGCCAGAC AATGGTCCAA AGCTCATGGC TGCTTGA 357 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Bro-1003 | Brassica oleracea | 100.0 | 9e-74 | 221 |
| LLPS-Brr-1147 | Brassica rapa | 95.76 | 2e-70 | 213 |
| LLPS-Art-1142 | Arabidopsis thaliana | 91.45 | 1e-65 | 204 |
| LLPS-Arl-2155 | Arabidopsis lyrata | 90.68 | 1e-66 | 204 |
| LLPS-Cus-0064 | Cucumis sativus | 78.45 | 8e-55 | 173 |
| LLPS-Mae-0083 | Manihot esculenta | 77.59 | 2e-56 | 177 |
| LLPS-Gor-0129 | Gossypium raimondii | 77.59 | 4e-56 | 177 |
| LLPS-Nia-0506 | Nicotiana attenuata | 76.72 | 2e-53 | 170 |
| LLPS-Glm-1458 | Glycine max | 76.72 | 2e-55 | 175 |
| LLPS-Dac-1238 | Daucus carota | 76.07 | 3e-53 | 169 |
| LLPS-Amt-1959 | Amborella trichopoda | 75.86 | 5e-37 | 127 |
| LLPS-Pot-0262 | Populus trichocarpa | 75.21 | 1e-50 | 162 |
| LLPS-Hea-1571 | Helianthus annuus | 75.0 | 3e-52 | 167 |
| LLPS-Sol-0128 | Solanum lycopersicum | 75.0 | 1e-51 | 166 |
| LLPS-Vir-1630 | Vigna radiata | 75.0 | 9e-53 | 168 |
| LLPS-Met-0199 | Medicago truncatula | 75.0 | 4e-52 | 166 |
| LLPS-Via-1713 | Vigna angularis | 75.0 | 2e-54 | 172 |
| LLPS-Viv-0816 | Vitis vinifera | 74.36 | 2e-50 | 162 |
| LLPS-Phv-0713 | Phaseolus vulgaris | 74.14 | 4e-53 | 169 |
| LLPS-Sot-1001 | Solanum tuberosum | 74.14 | 2e-51 | 165 |
| LLPS-Prp-0092 | Prunus persica | 72.41 | 5e-48 | 156 |
| LLPS-Mua-1185 | Musa acuminata | 70.49 | 3e-45 | 149 |
| LLPS-Sei-0190 | Setaria italica | 70.25 | 8e-49 | 158 |
| LLPS-Thc-1496 | Theobroma cacao | 69.83 | 8e-44 | 145 |
| LLPS-Sob-1217 | Sorghum bicolor | 69.42 | 2e-47 | 155 |
| LLPS-Brd-0446 | Brachypodium distachyon | 68.6 | 4e-47 | 154 |
| LLPS-Orbr-0146 | Oryza brachyantha | 67.77 | 1e-46 | 152 |
| LLPS-Orp-1446 | Oryza punctata | 67.77 | 8e-47 | 153 |
| LLPS-Orgl-0078 | Oryza glumaepatula | 67.77 | 5e-47 | 154 |
| LLPS-Php-0943 | Physcomitrella patens | 67.24 | 4e-44 | 146 |
| LLPS-Ors-0646 | Oryza sativa | 66.94 | 2e-46 | 152 |
| LLPS-Org-1052 | Oryza glaberrima | 66.94 | 2e-46 | 152 |
| LLPS-Orr-0884 | Oryza rufipogon | 66.94 | 2e-46 | 152 |
| LLPS-Orm-0418 | Oryza meridionalis | 66.94 | 2e-46 | 152 |
| LLPS-Ori-1268 | Oryza indica | 66.94 | 2e-46 | 152 |
| LLPS-Orb-1218 | Oryza barthii | 66.94 | 2e-46 | 152 |
| LLPS-Lep-1108 | Leersia perrieri | 65.85 | 1e-45 | 150 |
| LLPS-Hov-0078 | Hordeum vulgare | 65.57 | 1e-44 | 147 |
| LLPS-Zem-1537 | Zea mays | 64.71 | 3e-21 | 87.8 |
| LLPS-Tru-0826 | Triticum urartu | 63.93 | 2e-43 | 145 |
| LLPS-Tra-0692 | Triticum aestivum | 63.93 | 2e-43 | 145 |
| LLPS-Sem-1950 | Selaginella moellendorffii | 61.67 | 1e-36 | 127 |
| LLPS-Gaga-1512 | Gallus gallus | 52.63 | 7e-09 | 54.3 |
| LLPS-Dar-2110 | Danio rerio | 50.88 | 7e-07 | 48.5 |
| LLPS-Icp-2766 | Ictalurus punctatus | 50.82 | 4e-08 | 52.0 |
| LLPS-Asm-0228 | Astyanax mexicanus | 49.12 | 2e-06 | 47.0 |
| LLPS-Leo-0316 | Lepisosteus oculatus | 47.54 | 6e-07 | 48.5 |
| LLPS-Orl-1183 | Oryzias latipes | 47.31 | 1e-09 | 56.2 |
| LLPS-Abg-0735 | Absidia glauca | 46.84 | 8e-10 | 57.0 |
| LLPS-Xim-1267 | Xiphophorus maculatus | 46.25 | 6e-08 | 51.6 |
| LLPS-Orn-0487 | Oreochromis niloticus | 45.16 | 1e-08 | 53.5 |
| LLPS-Scm-1235 | Scophthalmus maximus | 45.16 | 6e-09 | 54.3 |
| LLPS-Pof-0982 | Poecilia formosa | 45.0 | 1e-07 | 50.4 |
| LLPS-Tag-0707 | Taeniopygia guttata | 44.33 | 4e-11 | 60.5 |
| LLPS-Scf-0361 | Scleropages formosus | 44.21 | 3e-09 | 55.1 |
| LLPS-Ten-0280 | Tetraodon nigroviridis | 44.09 | 1e-08 | 53.1 |
| LLPS-Lac-0415 | Latimeria chalumnae | 43.75 | 5e-08 | 51.6 |
| LLPS-Xet-2024 | Xenopus tropicalis | 43.14 | 2e-08 | 52.8 |
| LLPS-Tar-2586 | Takifugu rubripes | 43.01 | 1e-07 | 51.2 |
| LLPS-Anc-0433 | Anolis carolinensis | 42.86 | 6e-09 | 54.3 |
| LLPS-Tum-1289 | Tuber melanosporum | 42.5 | 4e-07 | 49.3 |
| LLPS-Gaa-0173 | Gasterosteus aculeatus | 42.16 | 2e-08 | 52.8 |
| LLPS-Otg-1300 | Otolemur garnettii | 42.11 | 2e-07 | 49.7 |
| LLPS-Cae-0807 | Caenorhabditis elegans | 40.74 | 5e-08 | 51.6 |
| LLPS-Sus-1778 | Sus scrofa | 40.71 | 6e-06 | 45.8 |
| LLPS-Bot-0174 | Bos taurus | 40.35 | 2e-06 | 47.4 |
| LLPS-Ict-0162 | Ictidomys tridecemlineatus | 39.66 | 8e-06 | 45.4 |
| LLPS-Mum-0163 | Mus musculus | 39.66 | 5e-06 | 45.8 |
| LLPS-Mea-1791 | Mesocricetus auratus | 39.66 | 6e-06 | 45.8 |
| LLPS-Pap-1846 | Pan paniscus | 39.47 | 3e-06 | 46.6 |
| LLPS-Pat-1106 | Pan troglodytes | 39.47 | 3e-06 | 46.6 |
| LLPS-Eqc-4486 | Equus caballus | 39.47 | 2e-06 | 47.4 |
| LLPS-Poa-1524 | Pongo abelii | 39.47 | 5e-06 | 46.2 |
| LLPS-Map-1059 | Magnaporthe poae | 39.45 | 1e-07 | 50.4 |
| LLPS-Gag-0115 | Gaeumannomyces graminis | 39.25 | 2e-07 | 49.7 |
| LLPS-Chr-0062 | Chlamydomonas reinhardtii | 39.17 | 7e-16 | 73.9 |
| LLPS-Cym-0386 | Cyanidioschyzon merolae | 38.54 | 3e-10 | 57.8 |
| LLPS-Scs-0577 | Sclerotinia sclerotiorum | 36.67 | 1e-07 | 50.8 |
| LLPS-Gas-0389 | Galdieria sulphuraria | 36.11 | 4e-10 | 57.4 |
| LLPS-Scc-0464 | Schizosaccharomyces cryophilus | 35.71 | 6e-07 | 48.5 |
| LLPS-Blg-0918 | Blumeria graminis | 33.33 | 2e-06 | 47.4 |