DrLLPS - Data resource of LLPS

LLPS-Brn-0801
BnaC03g59540D

Integrated Annotations

▼ OVERVIEW


Status:	Unreviewed
Protein Name:	60S ribosomal protein L18a
Gene Name:	BnaC03g59540D, GSBRNA2T00058201001
Ensembl Gene:	GSBRNA2T00132325001
Ensembl Protein:	CDX79564
Organism:	Brassica napus
Taxa ID:	3708
LLPS Type:	LLPS regulator

▼ PROPERTY

——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:

Condensate	Evidence	Orthologs
Nucleolus, Others	Predicted from orthologs	(View)

Organism	DrLLPS ID	UniProt ID	LLPS type	Condensate	Identity	E-value	Score
Caenorhabditis elegans	LLPS-Cae-0188	O44480	Regulator	P granule	53.64	1e-56	182
Homo sapiens	LLPS-Hos-0403	Q02543	Client	Nucleolus	52.94	5e-60	191
Bos taurus	LLPS-Bot-0039	Q3T003	Client	Nucleolus	52.94	5e-60	191
Arabidopsis thaliana	LLPS-Art-1255	P51418	Client	Nucleolus	97.75	2e-127	364
Mus musculus	LLPS-Mum-3302	P62717	Client	Postsynaptic density	54.61	5e-52	172

▼ CROSS REFERENCE

Database	Nucleotide ID	Protein ID
Ensembl	CDX79564	CDX79564
UniProt		A0A078HCR8, A0A078HCR8_BRANA
GeneBank	LK032349	CDY35269.1
RefSeq	XM_013815980.1, XM_013815983.1, XM_013815984.1	XP_013671434.1, XP_013671437.1, XP_013671438.1

▼ SEQUENCE

Protein Sequence (FASTA)
1 MVAFRFHQYQ VVGRALPTEK DVQPKIYRMK LWATNEVRAK SKFWYFLRKL KKVKKSNGQM 60 61 LAINEIFEKN PTNIKNFGIW LRYQSRTGYH NMYKEYRDTT LNGAVEQMYT EMASRHRVRF 120 121 PCIQIIKTAT VPAKLCKRES TKQFHNSKIK FPLVFRKVRP PSRKLKTTYK ASKPNLFM 178
Nucleotide CDS Sequence (FASTA)
1 ATGGTTGCTT TCAGGTTTCA CCAGTACCAG GTTGTCGGAA GAGCTCTCCC GACAGAGAAG 60 61 GATGTTCAAC CCAAGATTTA CAGGATGAAG CTCTGGGCCA CCAACGAGGT TCGTGCCAAG 120 121 TCCAAGTTCT GGTACTTCTT GAGGAAGCTG AAGAAGGTCA AGAAGAGTAA TGGTCAGATG 180 181 CTCGCCATTA ACGAGATCTT TGAGAAGAAC CCAACAAACA TCAAGAACTT CGGAATCTGG 240 241 TTGAGGTACC AGAGCAGAAC TGGATACCAC AACATGTACA AGGAGTACCG TGACACTACC 300 301 TTGAACGGAG CCGTTGAGCA GATGTACACT GAGATGGCAT CCCGACACCG TGTCAGGTTC 360 361 CCTTGCATCC AGATCATTAA GACTGCAACT GTCCCTGCCA AACTCTGCAA GAGGGAGAGC 420 421 ACCAAACAGT TTCACAACAG TAAAATCAAG TTCCCATTGG TGTTCCGTAA GGTGAGACCA 480 481 CCAAGCAGGA AGCTCAAGAC CACTTACAAG GCTTCCAAAC CCAACCTTTT CATGTAA 537

▼ ORTHOLOGY

DrLLPS ID	Organism	Identity	E-value	Score
LLPS-Bro-2837	Brassica oleracea	99.44	1e-129	368
LLPS-Brr-1543	Brassica rapa	98.31	4e-128	364
LLPS-Arl-0949	Arabidopsis lyrata	97.75	2e-127	362
LLPS-Art-1255	Arabidopsis thaliana	97.75	2e-127	364
LLPS-Via-0563	Vigna angularis	93.82	2e-122	350
LLPS-Pot-0841	Populus trichocarpa	93.82	1e-123	353
LLPS-Gor-2040	Gossypium raimondii	93.82	1e-123	353
LLPS-Glm-1769	Glycine max	93.26	2e-122	350
LLPS-Coc-1923	Corchorus capsularis	93.26	2e-123	352
LLPS-Vir-1023	Vigna radiata	92.13	1e-120	345
LLPS-Mae-0446	Manihot esculenta	92.13	5e-121	347
LLPS-Thc-1338	Theobroma cacao	91.57	2e-121	348
LLPS-Cus-0377	Cucumis sativus	91.57	4e-120	344
LLPS-Hov-0175	Hordeum vulgare	91.57	6e-119	341
LLPS-Tra-1097	Triticum aestivum	91.57	6e-119	341
LLPS-Sot-1523	Solanum tuberosum	91.57	2e-120	345
LLPS-Phv-1171	Phaseolus vulgaris	91.57	4e-121	347
LLPS-Viv-0045	Vitis vinifera	91.57	5e-121	347
LLPS-Tru-1368	Triticum urartu	91.57	6e-119	341
LLPS-Prp-0062	Prunus persica	91.57	1e-119	343
LLPS-Brd-1943	Brachypodium distachyon	91.01	4e-118	339
LLPS-Nia-0982	Nicotiana attenuata	91.01	4e-120	345
LLPS-Sol-1962	Solanum lycopersicum	90.91	4e-117	337
LLPS-Orni-1219	Oryza nivara	90.45	5e-118	339
LLPS-Dac-1658	Daucus carota	90.45	6e-119	341
LLPS-Orp-0229	Oryza punctata	90.45	5e-118	339
LLPS-Org-0957	Oryza glaberrima	90.45	5e-118	339
LLPS-Orr-1388	Oryza rufipogon	90.45	4e-118	339
LLPS-Orm-0155	Oryza meridionalis	90.45	2e-118	340
LLPS-Mua-1346	Musa acuminata	89.89	1e-117	338
LLPS-Sei-0388	Setaria italica	89.89	2e-116	335
LLPS-Met-0913	Medicago truncatula	89.89	3e-118	339
LLPS-Lep-0081	Leersia perrieri	89.89	5e-117	336
LLPS-Sob-2158	Sorghum bicolor	89.89	1e-116	335
LLPS-Orb-0028	Oryza barthii	89.33	6e-116	333
LLPS-Ori-1440	Oryza indica	89.33	6e-116	333
LLPS-Orgl-0007	Oryza glumaepatula	89.33	6e-116	333
LLPS-Amt-1092	Amborella trichopoda	89.33	2e-117	337
LLPS-Orbr-0150	Oryza brachyantha	89.33	6e-116	333
LLPS-Ors-1263	Oryza sativa	89.33	6e-116	333
LLPS-Zem-1981	Zea mays	89.33	4e-116	334
LLPS-Hea-2206	Helianthus annuus	88.7	3e-117	337
LLPS-Php-0714	Physcomitrella patens	83.05	1e-108	315
LLPS-Sem-0719	Selaginella moellendorffii	82.18	7e-105	305
LLPS-Chr-0083	Chlamydomonas reinhardtii	66.86	7e-85	254
LLPS-Osl-0630	Ostreococcus lucimarinus	58.86	9e-76	231
LLPS-Mea-0146	Mesocricetus auratus	58.0	1e-35	126
LLPS-Eqc-0664	Equus caballus	55.56	3e-15	75.1
LLPS-Sah-2448	Sarcophilus harrisii	55.06	2e-61	194
LLPS-Drm-1101	Drosophila melanogaster	55.06	6e-60	191
LLPS-Gas-0680	Galdieria sulphuraria	54.91	3e-65	205
LLPS-Mum-3302	Mus musculus	54.61	4e-52	172
LLPS-Asg-0039	Ashbya gossypii	53.95	4e-53	173
LLPS-Cae-0188	Caenorhabditis elegans	53.64	1e-56	182
LLPS-Asni-0635	Aspergillus niger	53.59	4e-53	174
LLPS-Fud-1369	Fukomys damarensis	53.53	3e-61	194
LLPS-Mod-0270	Monodelphis domestica	53.53	1e-61	195
LLPS-Abg-0587	Absidia glauca	53.14	1e-59	190
LLPS-Caj-1145	Callithrix jacchus	52.94	5e-60	191
LLPS-Gog-1752	Gorilla gorilla	52.94	5e-60	191
LLPS-Scs-0387	Sclerotinia sclerotiorum	52.94	4e-53	174
LLPS-Cea-2181	Cercocebus atys	52.94	5e-60	191
LLPS-Aon-0075	Aotus nancymaae	52.94	5e-60	191
LLPS-Sus-0845	Sus scrofa	52.94	4e-59	190
LLPS-Maf-3194	Macaca fascicularis	52.94	6e-60	191
LLPS-Chs-1869	Chlorocebus sabaeus	52.94	5e-60	191
LLPS-Paa-0283	Papio anubis	52.94	5e-60	191
LLPS-Mup-0718	Mustela putorius furo	52.94	6e-60	191
LLPS-Myl-1358	Myotis lucifugus	52.94	5e-60	191
LLPS-Ova-2086	Ovis aries	52.94	6e-60	191
LLPS-Ran-0598	Rattus norvegicus	52.94	9e-60	191
LLPS-Dio-1402	Dipodomys ordii	52.94	9e-60	191
LLPS-Bot-0039	Bos taurus	52.94	5e-60	191
LLPS-Tut-1403	Tursiops truncatus	52.94	3e-59	189
LLPS-Rhb-3043	Rhinopithecus bieti	52.94	5e-60	191
LLPS-Otg-1696	Otolemur garnettii	52.94	5e-60	191
LLPS-Pes-1513	Pelodiscus sinensis	52.94	5e-60	191
LLPS-Man-1917	Macaca nemestrina	52.94	5e-60	191
LLPS-Loa-2100	Loxodonta africana	52.94	6e-60	191
LLPS-Pat-2612	Pan troglodytes	52.94	5e-60	191
LLPS-Pap-1320	Pan paniscus	52.94	5e-60	191
LLPS-Hos-0403	Homo sapiens	52.94	5e-60	191
LLPS-Lac-0458	Latimeria chalumnae	52.94	5e-60	191
LLPS-Fec-1087	Felis catus	52.94	6e-60	191
LLPS-Ict-1191	Ictidomys tridecemlineatus	52.94	5e-60	191
LLPS-Nol-0497	Nomascus leucogenys	52.94	5e-60	191
LLPS-Cas-0480	Carlito syrichta	52.94	6e-60	191
LLPS-Mam-0728	Macaca mulatta	52.94	7e-60	191
LLPS-Poa-1330	Pongo abelii	52.94	5e-60	191
LLPS-Caf-4369	Canis familiaris	52.94	6e-60	191
LLPS-Cap-0027	Cavia porcellus	52.94	3e-60	192
LLPS-Mal-2767	Mandrillus leucophaeus	52.84	3e-59	191
LLPS-Aim-3426	Ailuropoda melanoleuca	52.35	9e-60	191
LLPS-Fia-1597	Ficedula albicollis	52.35	7e-60	191
LLPS-Anc-0512	Anolis carolinensis	52.35	6e-59	188
LLPS-Tag-3039	Taeniopygia guttata	52.35	8e-60	191
LLPS-Scj-0507	Schizosaccharomyces japonicus	52.05	2e-52	171
LLPS-Ora-0351	Ornithorhynchus anatinus	51.95	5e-53	172
LLPS-Xet-0537	Xenopus tropicalis	51.76	1e-59	192
LLPS-Gaga-1013	Gallus gallus	51.68	4e-50	165
LLPS-Leo-2626	Lepisosteus oculatus	51.18	4e-60	191
LLPS-Dar-0381	Danio rerio	51.18	1e-58	187
LLPS-Meg-1321	Meleagris gallopavo	51.14	6e-61	194
LLPS-Urm-1137	Ursus maritimus	50.85	2e-60	193
LLPS-Anp-1106	Anas platyrhynchos	50.31	8e-54	175
LLPS-Scc-0394	Schizosaccharomyces cryophilus	50.29	3e-53	174
LLPS-Scp-0273	Schizosaccharomyces pombe	50.29	7e-53	173
LLPS-Asm-0006	Astyanax mexicanus	50.0	1e-56	182
LLPS-Icp-1091	Ictalurus punctatus	50.0	8e-57	183
LLPS-Yal-0534	Yarrowia lipolytica	50.0	4e-55	178
LLPS-Crn-0301	Cryptococcus neoformans	50.0	3e-52	171
LLPS-Gaa-1309	Gasterosteus aculeatus	50.0	5e-57	183
LLPS-Scf-1348	Scleropages formosus	50.0	4e-57	184
LLPS-Blg-0976	Blumeria graminis	50.0	1e-41	143
LLPS-Miv-0309	Microbotryum violaceum	50.0	3e-54	176
LLPS-Scm-1900	Scophthalmus maximus	50.0	5e-57	184
LLPS-Dos-0558	Dothistroma septosporum	50.0	5e-45	152
LLPS-Put-1232	Puccinia triticina	50.0	5e-56	181
LLPS-Mel-0486	Melampsora laricipopulina	49.43	2e-56	182
LLPS-Ast-1370	Aspergillus terreus	49.43	6e-53	173
LLPS-Orl-0011	Oryzias latipes	49.41	4e-57	184
LLPS-Tar-2450	Takifugu rubripes	49.41	4e-57	184
LLPS-Orc-0828	Oryctolagus cuniculus	49.41	5e-54	176
LLPS-Ten-1132	Tetraodon nigroviridis	49.41	4e-57	184
LLPS-Chc-0571	Chondrus crispus	49.15	2e-57	185
LLPS-Sac-0886	Saccharomyces cerevisiae	49.13	4e-54	176
LLPS-Mao-0948	Magnaporthe oryzae	48.85	2e-53	174
LLPS-Asc-0276	Aspergillus clavatus	48.85	7e-54	176
LLPS-Nef-1481	Neosartorya fischeri	48.85	3e-54	177
LLPS-Xim-2443	Xiphophorus maculatus	48.82	1e-56	182
LLPS-Orn-1136	Oreochromis niloticus	48.82	2e-56	182
LLPS-Pof-0103	Poecilia formosa	48.82	1e-56	182
LLPS-Zyt-0296	Zymoseptoria tritici	48.28	5e-54	176
LLPS-Pyt-0294	Pyrenophora teres	48.28	1e-55	180
LLPS-Trv-0457	Trichoderma virens	48.28	2e-53	174
LLPS-Pytr-1068	Pyrenophora triticirepentis	48.28	1e-55	180
LLPS-Tum-0629	Tuber melanosporum	48.0	1e-41	143
LLPS-Trr-0389	Trichoderma reesei	47.75	6e-53	173
LLPS-Asf-0996	Aspergillus flavus	47.7	5e-50	168
LLPS-Aso-0736	Aspergillus oryzae	47.7	5e-51	168
LLPS-Asfu-0135	Aspergillus fumigatus	47.33	4e-43	147
LLPS-Nec-0267	Neurospora crassa	47.13	3e-51	168
LLPS-Lem-0469	Leptosphaeria maculans	47.13	4e-54	176
LLPS-Kop-0076	Komagataella pastoris	47.13	2e-52	172
LLPS-Cog-0431	Colletotrichum gloeosporioides	47.13	2e-51	169
LLPS-Cii-1291	Ciona intestinalis	47.09	1e-50	167
LLPS-Asn-0790	Aspergillus nidulans	46.67	7e-41	141
LLPS-Map-1186	Magnaporthe poae	46.55	7e-52	170
LLPS-Gag-0757	Gaeumannomyces graminis	46.55	7e-52	170
LLPS-Beb-1259	Beauveria bassiana	46.55	3e-51	169
LLPS-Cogr-1097	Colletotrichum graminicola	45.98	3e-50	166
LLPS-Spr-0855	Sporisorium reilianum	45.98	6e-50	165
LLPS-Usm-1058	Ustilago maydis	45.98	4e-50	166
LLPS-Coo-1268	Colletotrichum orbiculare	45.4	1e-48	162
LLPS-Fuv-0082	Fusarium verticillioides	45.4	4e-51	168
LLPS-Cym-0128	Cyanidioschyzon merolae	45.09	3e-47	159
LLPS-Fus-0612	Fusarium solani	44.94	8e-51	167
LLPS-Fuo-0130	Fusarium oxysporum	44.83	8e-51	167
LLPS-Cis-0802	Ciona savignyi	44.62	3e-48	161
LLPS-Pug-0254	Puccinia graminis	44.44	4e-41	144
LLPS-Ved-0499	Verticillium dahliae	44.25	2e-48	162
LLPS-Phn-0685	Phaeosphaeria nodorum	41.74	5e-22	92.8

LLPS-Brn-0801BnaC03g59540D

Protein Sequence

Nucleotide Sequence

LLPS-Brn-0801
BnaC03g59540D