LLPS-Brn-0759
BnaA06g02900D
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | BnaA06g02900D protein |
| Gene Name: | BnaA06g02900D, GSBRNA2T00021125001 |
| Ensembl Gene: | GSBRNA2T00021125001 |
| Ensembl Protein: | CDY22787 |
| Organism: | Brassica napus |
| Taxa ID: | 3708 |
| LLPS Type: | LLPS protein |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Droplet, Nucleolus, Stress granule | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | CDY22787 | CDY22787 |
| UniProt | A0A078GCJ6, A0A078GCJ6_BRANA | |
| GeneBank | LK032136 | CDY22787.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MATNGSVYVS NLPLGTDENM LAEYFGTIGL LKRDKRTGTP KVWLYRDKET DEPKGDATVT 60 61 YEDPHAALAA VEWFNNKEFH GSVIGVFMAE SKSKSGGDHQ SEGFGFDGGD IASKETNGGG 120 121 GGRGRGQGDS SAKPWQQDGD WMCPNTSCTN VNFAFRGVCN RCGTARPAGA SGGGMGGGGR 180 181 GRGRGGGADG GPPGKGASTG LFGPNDWSCP MCGNVNWAKR LKCNVCNTNK PGQNEGGVRG 240 241 GRGGGYKELD EQELEETKRR RREAEEDDGE MYDEFGNLKK KYRVKTNQAD TRPAVAAGRA 300 301 GWQVEELGNF LDGRERSRDR QRDRGDKHRD HHNYDKDRRR SRSRERERGG KERDYDYDHD 360 361 RNRDRDRDYS RGSRYRN 377 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGCTACGA ATGGATCAGT CTACGTTTCG AATCTTCCAC TAGGAACTGA TGAGAACATG 60 61 TTAGCTGAGT ATTTTGGGAC CATTGGGTTA CTAAAGAGAG ATAAGCGGAC TGGTACTCCC 120 121 AAGGTGTGGC TGTACCGAGA CAAGGAGACT GATGAGCCGA AAGGAGATGC GACTGTTACC 180 181 TATGAGGACC CGCACGCTGC TTTGGCTGCT GTTGAGTGGT TTAATAACAA AGAGTTCCAT 240 241 GGTAGCGTTA TTGGGGTTTT TATGGCGGAG TCGAAGAGCA AAAGTGGAGG AGATCATCAG 300 301 AGTGAGGGTT TTGGATTCGA TGGAGGTGAT ATTGCTAGTA AGGAGACTAA TGGAGGTGGT 360 361 GGTGGAAGGG GGAGAGGTCA GGGTGATTCT TCCGCCAAGC CGTGGCAGCA AGACGGTGAC 420 421 TGGATGTGCC CAAATACCAG TTGTACGAAT GTGAATTTTG CGTTCCGTGG GGTTTGTAAC 480 481 CGCTGTGGAA CTGCTAGACC GGCTGGTGCA TCTGGTGGCG GCATGGGTGG TGGGGGCCGT 540 541 GGAAGGGGTC GAGGTGGAGG TGCTGATGGT GGGCCACCGG GGAAGGGTGC TTCTACCGGT 600 601 CTTTTTGGTC CAAATGATTG GTCTTGTCCG ATGTGCGGCA ATGTCAACTG GGCTAAGCGT 660 661 TTGAAATGTA ATGTCTGCAA CACCAATAAA CCTGGTCAGA ATGAAGGTGG TGTGAGGGGA 720 721 GGTCGTGGTG GAGGCTACAA GGAATTGGAT GAACAAGAAT TAGAGGAAAC TAAGAGACGT 780 781 AGGCGTGAGG CTGAAGAAGA TGATGGTGAA ATGTATGATG AGTTTGGCAA TCTAAAGAAG 840 841 AAGTACCGTG TTAAAACAAA CCAGGCTGAC ACCAGACCTG CTGTTGCTGC TGGTCGTGCT 900 901 GGGTGGCAAG TCGAGGAATT AGGTAACTTT CTAGATGGAA GAGAGAGAAG CAGAGACAGG 960 961 CAAAGAGACC GTGGAGATAA GCATAGAGAT CATCATAACT ATGATAAGGA TAGACGGAGA 1020 1021 AGCAGAAGCC GAGAGAGGGA AAGAGGAGGC AAGGAACGTG ACTATGACTA TGACCATGAT 1080 1081 CGGAACAGAG ACCGAGACAG AGACTACAGT CGCGGAAGCA GGTACCGTAA TTGA 1134 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Brr-2803 | Brassica rapa | 98.8 | 3e-170 | 488 |
| LLPS-Bro-1524 | Brassica oleracea | 92.49 | 8e-152 | 441 |
| LLPS-Orb-1582 | Oryza barthii | 78.1 | 8e-30 | 122 |
| LLPS-Gor-2663 | Gossypium raimondii | 73.46 | 4e-67 | 216 |
| LLPS-Cus-0334 | Cucumis sativus | 72.64 | 2e-110 | 336 |
| LLPS-Pot-0882 | Populus trichocarpa | 69.68 | 1e-107 | 328 |
| LLPS-Orgl-1067 | Oryza glumaepatula | 68.91 | 4e-102 | 316 |
| LLPS-Orni-1289 | Oryza nivara | 68.83 | 4e-100 | 310 |
| LLPS-Ori-2100 | Oryza indica | 68.83 | 4e-100 | 310 |
| LLPS-Orr-1411 | Oryza rufipogon | 68.83 | 2e-100 | 311 |
| LLPS-Sei-1264 | Setaria italica | 68.69 | 3e-101 | 312 |
| LLPS-Dac-0882 | Daucus carota | 67.83 | 9e-105 | 322 |
| LLPS-Glm-0192 | Glycine max | 66.03 | 2e-105 | 323 |
| LLPS-Php-1295 | Physcomitrella patens | 65.59 | 2e-44 | 163 |
| LLPS-Org-1835 | Oryza glaberrima | 65.42 | 3e-66 | 216 |
| LLPS-Tra-0674 | Triticum aestivum | 64.62 | 3e-96 | 300 |
| LLPS-Ors-1718 | Oryza sativa | 63.82 | 2e-52 | 178 |
| LLPS-Chr-1691 | Chlamydomonas reinhardtii | 63.44 | 7e-15 | 80.1 |
| LLPS-Cii-0483 | Ciona intestinalis | 51.32 | 2e-22 | 97.4 |
| LLPS-Ran-0538 | Rattus norvegicus | 50.56 | 6e-19 | 92.4 |
| LLPS-Ict-2955 | Ictidomys tridecemlineatus | 50.56 | 8e-19 | 92.0 |
| LLPS-Gog-1454 | Gorilla gorilla | 49.44 | 8e-19 | 92.0 |
| LLPS-Caj-3101 | Callithrix jacchus | 49.44 | 1e-18 | 91.7 |
| LLPS-Fud-1072 | Fukomys damarensis | 49.44 | 2e-18 | 91.3 |
| LLPS-Maf-1508 | Macaca fascicularis | 49.44 | 1e-18 | 91.7 |
| LLPS-Mum-2279 | Mus musculus | 49.44 | 1e-18 | 91.7 |
| LLPS-Aon-3978 | Aotus nancymaae | 49.44 | 1e-18 | 91.7 |
| LLPS-Cea-0156 | Cercocebus atys | 49.44 | 1e-18 | 91.7 |
| LLPS-Mal-3101 | Mandrillus leucophaeus | 49.44 | 1e-18 | 91.7 |
| LLPS-Paa-2937 | Papio anubis | 49.44 | 1e-18 | 91.7 |
| LLPS-Otg-2864 | Otolemur garnettii | 49.44 | 1e-18 | 91.7 |
| LLPS-Orc-1376 | Oryctolagus cuniculus | 49.44 | 2e-18 | 91.3 |
| LLPS-Fec-1353 | Felis catus | 49.44 | 1e-18 | 91.7 |
| LLPS-Hos-0808 | Homo sapiens | 49.44 | 9e-19 | 92.0 |
| LLPS-Meg-0473 | Meleagris gallopavo | 49.44 | 2e-17 | 87.8 |
| LLPS-Pat-1353 | Pan troglodytes | 49.44 | 8e-19 | 92.0 |
| LLPS-Pap-2087 | Pan paniscus | 49.44 | 8e-19 | 92.0 |
| LLPS-Man-2674 | Macaca nemestrina | 49.44 | 1e-18 | 91.7 |
| LLPS-Gaga-0945 | Gallus gallus | 49.44 | 1e-17 | 88.6 |
| LLPS-Cas-0933 | Carlito syrichta | 49.44 | 1e-18 | 91.7 |
| LLPS-Nol-3433 | Nomascus leucogenys | 49.44 | 8e-19 | 92.0 |
| LLPS-Eqc-1131 | Equus caballus | 49.44 | 1e-18 | 91.7 |
| LLPS-Poa-2607 | Pongo abelii | 49.44 | 8e-19 | 92.0 |
| LLPS-Caf-1578 | Canis familiaris | 49.44 | 1e-18 | 91.7 |
| LLPS-Mam-2464 | Macaca mulatta | 49.44 | 1e-18 | 91.7 |
| LLPS-Fia-2970 | Ficedula albicollis | 49.43 | 3e-17 | 87.4 |
| LLPS-Tag-1079 | Taeniopygia guttata | 49.43 | 3e-17 | 87.4 |
| LLPS-Ora-2576 | Ornithorhynchus anatinus | 48.39 | 1e-16 | 85.5 |
| LLPS-Sah-2286 | Sarcophilus harrisii | 48.31 | 3e-18 | 90.5 |
| LLPS-Aim-3827 | Ailuropoda melanoleuca | 48.31 | 3e-18 | 90.1 |
| LLPS-Myl-1316 | Myotis lucifugus | 48.31 | 4e-18 | 90.1 |
| LLPS-Mod-2572 | Monodelphis domestica | 48.31 | 1e-18 | 91.7 |
| LLPS-Urm-0139 | Ursus maritimus | 48.31 | 2e-18 | 91.3 |
| LLPS-Loa-0495 | Loxodonta africana | 48.31 | 3e-18 | 90.1 |
| LLPS-Ova-2888 | Ovis aries | 47.19 | 3e-17 | 87.0 |
| LLPS-Cap-4025 | Cavia porcellus | 47.19 | 2e-17 | 87.8 |
| LLPS-Sus-3401 | Sus scrofa | 47.12 | 1e-18 | 91.3 |
| LLPS-Lac-0399 | Latimeria chalumnae | 46.53 | 3e-16 | 82.4 |
| LLPS-Icp-3909 | Ictalurus punctatus | 46.24 | 3e-16 | 82.4 |
| LLPS-Asm-3330 | Astyanax mexicanus | 46.24 | 6e-16 | 82.0 |
| LLPS-Orl-1503 | Oryzias latipes | 46.24 | 4e-16 | 82.8 |
| LLPS-Xim-2830 | Xiphophorus maculatus | 46.24 | 7e-16 | 81.3 |
| LLPS-Pes-3296 | Pelodiscus sinensis | 46.24 | 6e-16 | 82.0 |
| LLPS-Scm-3546 | Scophthalmus maximus | 46.24 | 3e-16 | 82.4 |
| LLPS-Dar-0708 | Danio rerio | 46.24 | 4e-16 | 82.0 |
| LLPS-Anc-3352 | Anolis carolinensis | 46.24 | 4e-16 | 82.0 |
| LLPS-Bot-0548 | Bos taurus | 46.15 | 4e-18 | 90.1 |
| LLPS-Drm-1254 | Drosophila melanogaster | 45.45 | 2e-20 | 95.5 |
| LLPS-Mup-3635 | Mustela putorius furo | 45.16 | 3e-15 | 79.7 |
| LLPS-Dio-1760 | Dipodomys ordii | 45.16 | 4e-15 | 79.3 |
| LLPS-Leo-0455 | Lepisosteus oculatus | 44.9 | 5e-16 | 82.4 |
| LLPS-Tar-3100 | Takifugu rubripes | 44.9 | 5e-16 | 82.0 |
| LLPS-Scf-3196 | Scleropages formosus | 44.9 | 6e-16 | 81.6 |
| LLPS-Orn-3729 | Oreochromis niloticus | 44.9 | 6e-16 | 82.0 |
| LLPS-Xet-0074 | Xenopus tropicalis | 44.9 | 8e-16 | 81.6 |
| LLPS-Ten-3182 | Tetraodon nigroviridis | 44.9 | 1e-16 | 82.4 |
| LLPS-Chs-3384 | Chlorocebus sabaeus | 43.88 | 2e-16 | 83.2 |
| LLPS-Mea-0213 | Mesocricetus auratus | 43.88 | 2e-15 | 80.5 |
| LLPS-Tut-1131 | Tursiops truncatus | 43.88 | 9e-16 | 81.3 |
| LLPS-Abg-1156 | Absidia glauca | 43.83 | 4e-26 | 111 |
| LLPS-Rhb-2003 | Rhinopithecus bieti | 42.57 | 1e-16 | 84.0 |
| LLPS-Coc-0909 | Corchorus capsularis | 41.18 | 6e-11 | 67.8 |
| LLPS-Gaa-3037 | Gasterosteus aculeatus | 41.1 | 2e-17 | 85.9 |
| LLPS-Pof-1045 | Poecilia formosa | 40.26 | 7e-17 | 84.3 |
| LLPS-Anp-2499 | Anas platyrhynchos | 40.12 | 5e-25 | 109 |
| LLPS-Cis-1695 | Ciona savignyi | 39.24 | 3e-12 | 68.9 |